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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3843594..3844964- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48285-T1 ID=CAN33_48285-T1|Name=CAN33_48285-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1371bp|location=Sequence derived from alignment at NKJJ01000022.1:3843594..3844964- (Aspergillus niger FDAARGOS_311)
ATGGCTGATGATACCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGT
GAAGTCATCCAATGATGCTAAATATACACTCACTCTGCCATCATCAACCT
CGGTCTCTGATCTGAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACC
CCAGCTGAGCGCCAGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAA
TGAAACCCTGGCAACGTACAACATCAAGGATGGACACACTATTCACCTGG
TGAAGAGTGCACCCAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACG
TCAACATCCGCACCTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGT
CCCCACGAATCTCGCTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGA
CGGGAGCCAGATATGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTC
GGGCCTGATGGCGGGGTAAGTCGTTTGCCTTGATGTTGTCCTGACAGGCT
TCTTGTGTCATCGACAAACCAACTAATACGCTGTTTCTAGATGGGCCCTC
CTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCCTCAATTTCAG
TCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTGACATGATGAT
CCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGTACGGCAGATGA
TGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAACTCGATACGT
CAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCCTTGGTGGAGG
CGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGAGGAAAACAGAG
ACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGCCGCGTTCAAC
CCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCGCAGCCCTTTT
TGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGCGACTCCGTCGG
GCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCACCGAGCGAGCC
GCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGCAGGGCTTCCA
GAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGGCGGCCAAGGCG
GTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCCTTTCCTCCGG
GACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTGCCGCACCGGG
AGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACTGTTTGGTGGTG
GATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCGAGGAACGGTATG
CAGAGCAGCTTCGTCAATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3843594..3844964- >CAN33_48285-T1 ID=CAN33_48285-T1|Name=CAN33_48285-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2592bp|location=Sequence derived from alignment at NKJJ01000022.1:3843594..3844964- (Aspergillus niger FDAARGOS_311)
ATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCC
TCAATTTCAGTCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTG
ACATGATGATCCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGTA
CGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAA
CTCGATACGTCAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCC
TTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGAG
GAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGC
CGCGTTCAACCCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCG
CAGCCCTTTTTGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGCG
ACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCAC
CGAGCGAGCCGCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGC
AGGGCTTCCAGAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGGC
GGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCC
TTTCCTCCGGGACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTG
CCGCACCGGGAGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACTG
TTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCGAG
GAACGGTATGCAGAGCAGCTTCGTCAATTGAATGGCTGATGATACCGCCG
CGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAATGATGCT
AAATATACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTGAAAGA
GAAGCTAGCGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCCAGCGTC
TGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAACGTAC
AACATCAAGGATGGACACACTATTCACCTGGTGAAGAGTGCACCCAGCAA
CCGGCCCCCTAGTGGTGCTGCGACGACGACGTCAACATCCGCACCTGGTG
GTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCGCTGCC
GGCACGGGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATATGCCGG
GTTCGCGCAACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCGGGATGG
GCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCCTCAA
TTTCAGTCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTGACAT
GATGATCCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGTACGGC
AGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAACTCG
ATACGTCAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCCTTGG
TGGAGGCGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGAGGAAA
ACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGCCGCG
TTCAACCCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCGCAGC
CCTTTTTGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGCGACTC
CGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCACCGAG
CGAGCCGCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGCAGGG
CTTCCAGAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGGCGGCC
AAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCCTTTC
CTCCGGGACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTGCCGC
ACCGGGAGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACTGTTTG
GTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCGAGGAAC
GGTATGCAGAGCAGCTTCGTCAATTGAATGGCTGATGATACCGCCGCGGC
CGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAATGATGCTAAAT
ATACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTGAAAGAGAAG
CTAGCGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCCAGCGTCTGAT
CTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAACGTACAACA
TCAAGGATGGACACACTATTCACCTGGTGAAGAGTGCACCCAGCAACCGG
CCCCCTAGTGGTGCTGCGACGACGACGTCAACATCCGCACCTGGTGGTGC
GGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCGCTGCCGGCA
CGGGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATATGCCGGGTTC
GCGCAACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264JQ1 |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR006636 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF13881 |
| DBxref | PFAM:PF11976 |
| Product | Ubiquitin family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3843594..3844964 - |
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