|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:3891858..3892928+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48355-T1 ID=CAN33_48355-T1|Name=CAN33_48355-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1071bp|location=Sequence derived from alignment at NKJJ01000022.1:3891858..3892928+ (Aspergillus niger FDAARGOS_311)
ATGAAAACTGCCGAATTCGAGTTCGATCTTGACTACAAGGTCATGCCCCA
TGATCCTGTTGAGCTTCGCGGGAAGACCCGCGATAGCGGAAAGATGATTG
TCCTAGATCGCGAGAGCTCTAAGATCGATCATGCTATATTCTCCAGCATT
GGAGACTATTTCCGCCCCGGAGACCTCCTCGTGCTGAATGACAGCTACAT
GCTGTCAAATACGCTCTGGTTCGAGCACGGCAACAAGGAGTCCCTGCAAC
TGACCGTCTACGGCCACGAGCCAGACGGCACCACCATCGTTGAGCTCAAG
AAGCCCGAGGCCATGTTCAAACGAGGCCAAACCCTGACCTCGCTGGATGA
GGAGAAGCTCAAATGCACGCTCCTTGACCAGCAGCCCGATAAGCTGTGGA
AGGTCCAGTTCACCCCAACTGAGCTGCTCCTCCCAACCCTCGATCAATAC
GGAGCCCGGCTCGACGAAAACATCCATTTGAACCCTACTTACTGGAAAGA
AAAGCCCGATGCTTACCGCTCTGTCTATGCCAAAAAGCCAGGTTCTCTCG
AGATCCCTTCGGCTGGACTGCACTTCTCTCATGAGCTCCTCGCTGAAATC
TCCGCCAAGGGAGTTGAGATCGCCTACATCACTCTGCATGTGGGGGCGAC
TGAGATTCTGTCCGTTCGGCACATCAGCGTCGAGGAGATTGAGAAACACA
AGGTGCGATCGGAGTATTACGAGGTCAGCGAAAGGACTTCAGCGCAGCTG
AATCGAGCAAGAAGCGAAGGTCGTCGTGTCATTGCTGTTGGCACGACTGT
TATGCGGACGCTGGAGACCATTACCCGTGAGACCGGACGCAAGGGTACCA
TCAAGCCCCAGCATGGATGGACCGATCTCTATATCTATCCGGGATTTGAG
TTCAATGCTGTGGATGTGCTGCTTACCAATTTGCATCGTCCGCGGTCTAG
CCATATTGTGCTTACGGCTGCTTTCGCGGGGACCGACTTTGTTATGAGAA
GCTACAAGGAAATTCAGGAGAAGGGTGATTATGAGTTTGATATGTTCGGG
GATTGTATGCTTGTTACTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:3891858..3892928+ >CAN33_48355-T1 ID=CAN33_48355-T1|Name=CAN33_48355-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1071bp|location=Sequence derived from alignment at NKJJ01000022.1:3891858..3892928+ (Aspergillus niger FDAARGOS_311)
ATGAAAACTGCCGAATTCGAGTTCGATCTTGACTACAAGGTCATGCCCCA
TGATCCTGTTGAGCTTCGCGGGAAGACCCGCGATAGCGGAAAGATGATTG
TCCTAGATCGCGAGAGCTCTAAGATCGATCATGCTATATTCTCCAGCATT
GGAGACTATTTCCGCCCCGGAGACCTCCTCGTGCTGAATGACAGCTACAT
GCTGTCAAATACGCTCTGGTTCGAGCACGGCAACAAGGAGTCCCTGCAAC
TGACCGTCTACGGCCACGAGCCAGACGGCACCACCATCGTTGAGCTCAAG
AAGCCCGAGGCCATGTTCAAACGAGGCCAAACCCTGACCTCGCTGGATGA
GGAGAAGCTCAAATGCACGCTCCTTGACCAGCAGCCCGATAAGCTGTGGA
AGGTCCAGTTCACCCCAACTGAGCTGCTCCTCCCAACCCTCGATCAATAC
GGAGCCCGGCTCGACGAAAACATCCATTTGAACCCTACTTACTGGAAAGA
AAAGCCCGATGCTTACCGCTCTGTCTATGCCAAAAAGCCAGGTTCTCTCG
AGATCCCTTCGGCTGGACTGCACTTCTCTCATGAGCTCCTCGCTGAAATC
TCCGCCAAGGGAGTTGAGATCGCCTACATCACTCTGCATGTGGGGGCGAC
TGAGATTCTGTCCGTTCGGCACATCAGCGTCGAGGAGATTGAGAAACACA
AGGTGCGATCGGAGTATTACGAGGTCAGCGAAAGGACTTCAGCGCAGCTG
AATCGAGCAAGAAGCGAAGGTCGTCGTGTCATTGCTGTTGGCACGACTGT
TATGCGGACGCTGGAGACCATTACCCGTGAGACCGGACGCAAGGGTACCA
TCAAGCCCCAGCATGGATGGACCGATCTCTATATCTATCCGGGATTTGAG
TTCAATGCTGTGGATGTGCTGCTTACCAATTTGCATCGTCCGCGGTCTAG
CCATATTGTGCTTACGGCTGCTTTCGCGGGGACCGACTTTGTTATGAGAA
GCTACAAGGAAATTCAGGAGAAGGGTGATTATGAGTTTGATATGTTCGGG
GATTGTATGCTTGTTACTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008616 | queuosine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016853 | isomerase activity |
| GO:0016740 | transferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000221.10 |
| DBxref | InterPro:IPR036100 |
| DBxref | InterPro:IPR003699 |
| DBxref | InterPro:IPR042118 |
| DBxref | InterPro:IPR042119 |
| DBxref | PFAM:PF02547 |
| Product | Queuosine biosynthesis protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:3891858..3892928 + |
|
