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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4090760..4091796+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48670-T1 ID=CAN33_48670-T1|Name=CAN33_48670-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1037bp|location=Sequence derived from alignment at NKJJ01000022.1:4090760..4091796+ (Aspergillus niger FDAARGOS_311)
ATGCCCCTAGTCGAAGACAGTCCTCGCGAGGACATCGACGCGATCCAAAT
ACCCTCTACAACCCCCGATCACGACAATGAAGCTCATAATGAAGAACACT
ACGACGATAACGACGTCCCTGTCAACAGAAAAACCAGCTTTGGTGGTCGT
CTCAATCAATACTTCCACACAGCCAAGCCTACATCGTCAGCGCCACCAGC
ACTCCCATCCACGAAACAAACCACTATCAGCACTTCCTCTCCTCTAAAAC
GCAAACGAACCACACCACCAACGACAACATCAACACGAATAACCCGCTCG
CGCTCCCGCTCCTCCACCTCGACCCCAACCAGCACCACCACGACTACCTC
CTCCCCACGCCCACGCAAAACCCCACACCCACACCACCCACCTCCTCAGC
AGCAGACTCCCTCCTCGTCGACACCATCCCACCCAACCTAACCCTCCTCC
TCGTAGGCGTAAACCCGGGGATCCTAACGGGAGTAACAGGCTACGCCTAC
GCACACCCTAGCAACCTCTTTTGGAAACTCCTGCACTGGTCCGGGATCAC
ACCCATCCGCCACCCACCCTCCGATACATACAAACTCCCCGAACTATATA
ACATCGGCAACACGAATATTGTGGAGCGCCCGACGCGGGACGCGAGTATG
CTCAGCAAGAAGGAGATGGATGCAGGAGTACCGGTTCTGGAAGAGAAGGT
GAGGGAGAAAAGACCGGAAGTGGTGTGTCTTGTGGGCAAGAGTATCTGGG
AGGCGGTTTGGAGGGTTAAGGTTGGACGGGGGATTAGGAAGGAAGAGTTT
AGGTATGGGTGGCAGGATTTGGAGATGAATATGGGGAGAGTGGGTGGTGA
AGGCGGATGGGAGGGGGCCAGGGTGTTTGTGGCTACGACTACTAGTGGGT
TGGCGGCGGGGATGTCGTTGCAGGAGAAGAGGGAGGTTTGGGATGAGTTG
GGGAGGTGGGTTTGTGAGAGGAGGAAAGTATGGGAGAGGGAAGGGGAGAA
GGTGAAAGTTGGTGGTGATGATACGAAATTAGAATAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4090760..4091796+ >CAN33_48670-T1 ID=CAN33_48670-T1|Name=CAN33_48670-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1554bp|location=Sequence derived from alignment at NKJJ01000022.1:4090760..4091796+ (Aspergillus niger FDAARGOS_311)
ATGCCCCTAGTCGAAGACAGTCCTCGCGAGGACATCGACGCGATCCAAAT
ACCCTCTACAACCCCCGATCACGACAATGAAGCTCATAATGAAGAACACT
ACGACGATAACGACGTCCCTGTCAACAGAAAAACCAGCTTTGCAGACTCC
CTCCTCGTCGACACCATCCCACCCAACCTAACCCTCCTCCTCGTAGGCGT
AAACCCGGGGATCCTAACGGGAGTAACAGGCTACGCCTACGCACACCCTA
GCAACCTCTTTTGGAAACTCCTGCACTGGTCCGGGATCACACCCATCCGC
CACCCACCCTCCGATACATACAAACTCCCCGAACTATATAACATCGGCAA
CACGAATATTGTGGAGCGCCCGACGCGGGACGCGAGTATGCTCAGCAAGA
AGGAGATGGATGCAGGAGTACCGGTTCTGGAAGAGAAGGTGAGGGAGAAA
AGACCGGAAGTGGTGTGTCTTGTGGGCAAGAGTATCTGGGAGGCGGTTTG
GAGGGTTAAGGTTGGACGGGGGATTAGGAAGGAAGAGTTTAGGTATGGGT
GGCAGGATTTGGAGATGAATATGGGGAGAGTGGGTGGTGAAGGCGGATGG
GAGGGGGCCAGGGTGTTTGTGGCTACGACTACTAGTGGGTTGGCGGCGGG
GATGTCGTTGCAGGAGAAGAGGGAGGTTTGGGATGAGTTGGGGAGGTGGG
TTTGTGAGAGGAGGAAAGTATGGGAGAGGGAAGGGGAGAAGGTGAAAGTT
GGTGGTGATGATACGAAATTAGAATAGATGCCCCTAGTCGAAGACAGTCC
TCGCGAGGACATCGACGCGATCCAAATACCCTCTACAACCCCCGATCACG
ACAATGAAGCTCATAATGAAGAACACTACGACGATAACGACGTCCCTGTC
AACAGAAAAACCAGCTTTGCAGACTCCCTCCTCGTCGACACCATCCCACC
CAACCTAACCCTCCTCCTCGTAGGCGTAAACCCGGGGATCCTAACGGGAG
TAACAGGCTACGCCTACGCACACCCTAGCAACCTCTTTTGGAAACTCCTG
CACTGGTCCGGGATCACACCCATCCGCCACCCACCCTCCGATACATACAA
ACTCCCCGAACTATATAACATCGGCAACACGAATATTGTGGAGCGCCCGA
CGCGGGACGCGAGTATGCTCAGCAAGAAGGAGATGGATGCAGGAGTACCG
GTTCTGGAAGAGAAGGTGAGGGAGAAAAGACCGGAAGTGGTGTGTCTTGT
GGGCAAGAGTATCTGGGAGGCGGTTTGGAGGGTTAAGGTTGGACGGGGGA
TTAGGAAGGAAGAGTTTAGGTATGGGTGGCAGGATTTGGAGATGAATATG
GGGAGAGTGGGTGGTGAAGGCGGATGGGAGGGGGCCAGGGTGTTTGTGGC
TACGACTACTAGTGGGTTGGCGGCGGGGATGTCGTTGCAGGAGAAGAGGG
AGGTTTGGGATGAGTTGGGGAGGTGGGTTTGTGAGAGGAGGAAAGTATGG
GAGAGGGAAGGGGAGAAGGTGAAAGTTGGTGGTGATGATACGAAATTAGA
ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019104 | DNA N-glycosylase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006281 | DNA repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015637 |
| DBxref | InterPro:IPR036895 |
| DBxref | InterPro:IPR005122 |
| DBxref | PFAM:PF03167 |
| Product | Uracil DNA glycosylase superfamily protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4090760..4091796 + |
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