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CAN33_48675-T1, CAN33_48675-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48675-T1
Unique NameCAN33_48675-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4092079..4092549-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48675-T1 ID=CAN33_48675-T1|Name=CAN33_48675-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=471bp|location=Sequence derived from alignment at NKJJ01000022.1:4092079..4092549- (Aspergillus niger FDAARGOS_311)
ATGCCTCGCCACAACGACCCCACCTCCAAGATGTTCTACAAGGGAGCATC
CGACGACTTCATCGTCTTCGTCGATGACCACGACGCCCTGAACAGATGGC
GTGGTGACCGCTCAGTCCCTCTGGCGGATGTTCTCAATGGCTGGAAGATC
TTTGTTACTCACAAGTAAGTCCTTGTCTTTATGCCCTCAGCAGTGAAAGC
AGAACTAACCAGCACTCACTTCTAGGCACGGAGCCCAAGGCGTCCTTGAC
GGAGCTAGCAAGGCTAGTCTCGAGAATGAATTCGGAACTGCCAATGAAGA
CGACGTTATAACCCAGATCTTGGAGCGCGGCGAGTACCAGTCTACTATTG
TATGTTGCTTTGCTTTGCTTCCCTTGACCCTTCATGAGGAATAATGCTGA
CTGATCTGTGATACTAGGCTCGCGAACAACAAGGTGATACCAACTTCCGT
AATGGACCTGCTTTCCGATAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4092079..4092549-

>CAN33_48675-T1 ID=CAN33_48675-T1|Name=CAN33_48675-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1026bp|location=Sequence derived from alignment at NKJJ01000022.1:4092079..4092549- (Aspergillus niger FDAARGOS_311)
GCTCGCGAACAACAAGGTGATACCAACTTCCGTAATGGACCTGCTTTCCG
ATAGGCACGGAGCCCAAGGCGTCCTTGACGGAGCTAGCAAGGCTAGTCTC
GAGAATGAATTCGGAACTGCCAATGAAGACGACGTTATAACCCAGATCTT
GGAGCGCGGCGAGTACCAGTCTACTATTATGCCTCGCCACAACGACCCCA
CCTCCAAGATGTTCTACAAGGGAGCATCCGACGACTTCATCGTCTTCGTC
GATGACCACGACGCCCTGAACAGATGGCGTGGTGACCGCTCAGTCCCTCT
GGCGGATGTTCTCAATGGCTGGAAGATCTTTGTTACTCACAAGCTCGCGA
ACAACAAGGTGATACCAACTTCCGTAATGGACCTGCTTTCCGATAGGCAC
GGAGCCCAAGGCGTCCTTGACGGAGCTAGCAAGGCTAGTCTCGAGAATGA
ATTCGGAACTGCCAATGAAGACGACGTTATAACCCAGATCTTGGAGCGCG
GCGAGTACCAGTCTACTATTATGCCTCGCCACAACGACCCCACCTCCAAG
ATGTTCTACAAGGGAGCATCCGACGACTTCATCGTCTTCGTCGATGACCA
CGACGCCCTGAACAGATGGCGTGGTGACCGCTCAGTCCCTCTGGCGGATG
TTCTCAATGGCTGGAAGATCTTTGTTACTCACAAGCTCGCGAACAACAAG
GTGATACCAACTTCCGTAATGGACCTGCTTTCCGATAGGCACGGAGCCCA
AGGCGTCCTTGACGGAGCTAGCAAGGCTAGTCTCGAGAATGAATTCGGAA
CTGCCAATGAAGACGACGTTATAACCCAGATCTTGGAGCGCGGCGAGTAC
CAGTCTACTATTATGCCTCGCCACAACGACCCCACCTCCAAGATGTTCTA
CAAGGGAGCATCCGACGACTTCATCGTCTTCGTCGATGACCACGACGCCC
TGAACAGATGGCGTGGTGACCGCTCAGTCCCTCTGGCGGATGTTCTCAAT
GGCTGGAAGATCTTTGTTACTCACAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_48675CAN33_48675Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48675-T1CAN33_48675-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48675-T1.cdsCAN33_48675-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48675-T1.exon3CAN33_48675-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_48675-T1.exon2CAN33_48675-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48675-T1.exon1CAN33_48675-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019783
DBxrefInterPro:IPR036786
DBxrefPFAM:PF01172
ProductShwachman-Bodian-Diamond syndrome (SBDS) protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4092079..4092549 -
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