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CAN33_48690-T1, CAN33_48690-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48690-T1
Unique NameCAN33_48690-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4098453..4099512+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48690-T1 ID=CAN33_48690-T1|Name=CAN33_48690-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1060bp|location=Sequence derived from alignment at NKJJ01000022.1:4098453..4099512+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGG
TACTGGAAAGGCAAGTTAAAACAAGAATTTCTTATCCCATATGGCTTACT
GGGTGGAGGTGGCATGTCACCTCTTCGACGCCTCTTTATGCTCGACTGCA
TTCCTGCCATGCGCGTTTACCCCTCTCTGTTGCCCGTCGTCTCTATCAAC
AGAAAACTTCATCGCCCGCCCAACCTCACCCAGACGAGACATCATTACTG
ACTGAGGATTTTCACTGCAGACCACCTTCGTCAAGCGCCACTTGACTGGC
GAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCT
CGCTTTTAACACCGTATGCCCCGCCGGAAACCCCGCTTTGTCCATTCCGC
CGTCTTTGTGCCGGTCCGACTAACGCTTTTGCCAGAACCTGGGTAACATC
CAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCG
CGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTA
CCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTAAGTGCTTC
CACAAATCAGCACTCGAACCACGCGCAATATGGATCAAATTGACAAATTC
ACTCTAGGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTG
CGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCA
CCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCC
AACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGG
CAACCCCCAGCTGGTAAGTCAGACACGGTCATTGGTCGCTTTCACTGGTG
AGACTGGAAGCTAACAAGCATTTCCCAGGAATTCGTTGCTGCCCCCGCTC
TTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCAGTACGAG
AAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGGAGGACGC
CGATTTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4098453..4099512+

>CAN33_48690-T1 ID=CAN33_48690-T1|Name=CAN33_48690-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3105bp|location=Sequence derived from alignment at NKJJ01000022.1:4098453..4099512+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCACCACCTTCGTCAA
GCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTG
TCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGGGTAACATCCAGTTC
GACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGG
TTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACCTCCC
GTATCACCTACAAGAACGTCCCCAACTGGCACCGTGATCTCGTCCGTGTC
TGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGA
GCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCC
AGTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTC
CTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGAATTCGTTGC
TGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGG
CCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGAC
GAGGAGGACGCCGATTTGTAAATGGCTGCTCAGGTACCGACCTTCAAGCT
TGTCCTCACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGA
AGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACC
AACCTGGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAA
GTTCGGTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCA
TCATGTTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGG
CACCGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGG
TAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCT
TCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAAC
TACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAA
CCCCCAGCTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCC
AAGTCAACCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCT
GCCAACATGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGC
TCAGGTACCGACCTTCAAGCTTGTCCTCACCACCTTCGTCAAGCGCCACT
TGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTG
CACCCTCTCGCTTTTAACACCAACCTGGGTAACATCCAGTTCGACGTCTG
GGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGGTTACTACA
TCAACGGACAGTGCGGTATCATCATGTTCGATGTTACCTCCCGTATCACC
TACAAGAACGTCCCCAACTGGCACCGTGATCTCGTCCGTGTCTGCGAGGG
TATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGG
TGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACTAC
GACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCT
CGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGAATTCGTTGCTGCCCCCG
CTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCAGTAC
GAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGGAGGA
CGCCGATTTGTAAATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCA
CCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATC
GCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGGG
TAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTG
GTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTC
GATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTGA
TCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGG
TCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGC
AAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATTT
CGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGC
TGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAAC
CCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACAT
GCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTCAGGTAC
CGACCTTCAAGCTTGTCCTCACCACCTTCGTCAAGCGCCACTTGACTGGC
GAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCT
CGCTTTTAACACCAACCTGGGTAACATCCAGTTCGACGTCTGGGACACTG
CTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGGTTACTACATCAACGGA
CAGTGCGGTATCATCATGTTCGATGTTACCTCCCGTATCACCTACAAGAA
CGTCCCCAACTGGCACCGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCA
TCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCC
AAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTC
CGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCA
AGTTGGTCGGCAACCCCCAGCTGGAATTCGTTGCTGCCCCCGCTCTTGCT
CCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCAGTACGAGAAGGA
GATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGGAGGACGCCGATT
TGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006913nucleocytoplasmic transport
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GSP1CAN33_48690Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48690-T1CAN33_48690-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48690-T1.exon1CAN33_48690-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_48690-T1.exon2CAN33_48690-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48690-T1.exon3CAN33_48690-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_48690-T1.exon4CAN33_48690-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_48690-T1.exon5CAN33_48690-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48690-T1.cdsCAN33_48690-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR002041
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductGTP-binding nuclear protein gsp1/Ran
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4098453..4099512 +
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