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CAN33_48705-T1, CAN33_48705-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48705-T1
Unique NameCAN33_48705-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4110782..4111306+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48705-T1 ID=CAN33_48705-T1|Name=CAN33_48705-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=525bp|location=Sequence derived from alignment at NKJJ01000022.1:4110782..4111306+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTCAAGAACGGTACGTCTATCCTCTCATCGCCATCCTAATGGTG
AGCTGTGGCTGAACATCGTCCACCCCCCTACAGACGCTTTCCCTTCTTCT
GCCGCCTTCGACGCCATCAACTCGACTCTGCAGGCTGATGCTGCCGAGCG
CAAAGAGGCCATCAACAAGGCTAAAGCGGTGGTCGCCTTCAACATCAAGA
ACGACAAGGGCAAAGAAGAGAGCTGGTATCTCGACCTCAAGGACAAGGGT
GTTGTGGGCAAGGGTGCTGCTCCCGAAGGAGGAAAAGCTGATGGTGAGTT
CAAACAATTATTCGCACCAGATGACGGATCCGATGCTGATGAGGCATCGA
TGTTATTGCAGTGACTCTCTCTCTTTCGGATGCCGACTTCAGCGCCCTCG
TAAGCGGCAAGGCCAATGCCCAGAGGCTCTTTATGGGTGGGAAGCTCAAG
ATCAAGGGCAACATTATGAAGGCGACCAAGATGGAGCCTGTCCTGAAGAA
GGCCCAGGGCAAGGCTAAGCTATAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4110782..4111306+

>CAN33_48705-T1 ID=CAN33_48705-T1|Name=CAN33_48705-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1170bp|location=Sequence derived from alignment at NKJJ01000022.1:4110782..4111306+ (Aspergillus niger FDAARGOS_311)
ATGTCTCTCAAGAACGACGCTTTCCCTTCTTCTGCCGCCTTCGACGCCAT
CAACTCGACTCTGCAGGCTGATGCTGCCGAGCGCAAAGAGGCCATCAACA
AGGCTAAAGCGGTGGTCGCCTTCAACATCAAGAACGACAAGGGCAAAGAA
GAGAGCTGGTATCTCGACCTCAAGGACAAGGGTGTTGTGGGCAAGGGTGC
TGCTCCCGAAGGAGGAAAAGCTGATGTGACTCTCTCTCTTTCGGATGCCG
ACTTCAGCGCCCTCGTAAGCGGCAAGGCCAATGCCCAGAGGCTCTTTATG
GGTGGGAAGCTCAAGATCAAGGGCAACATTATGAAGGCGACCAAGATGGA
GCCTGTCCTGAAGAAGGCCCAGGGCAAGGCTAAGCTATAGATGTCTCTCA
AGAACGACGCTTTCCCTTCTTCTGCCGCCTTCGACGCCATCAACTCGACT
CTGCAGGCTGATGCTGCCGAGCGCAAAGAGGCCATCAACAAGGCTAAAGC
GGTGGTCGCCTTCAACATCAAGAACGACAAGGGCAAAGAAGAGAGCTGGT
ATCTCGACCTCAAGGACAAGGGTGTTGTGGGCAAGGGTGCTGCTCCCGAA
GGAGGAAAAGCTGATGTGACTCTCTCTCTTTCGGATGCCGACTTCAGCGC
CCTCGTAAGCGGCAAGGCCAATGCCCAGAGGCTCTTTATGGGTGGGAAGC
TCAAGATCAAGGGCAACATTATGAAGGCGACCAAGATGGAGCCTGTCCTG
AAGAAGGCCCAGGGCAAGGCTAAGCTATAGATGTCTCTCAAGAACGACGC
TTTCCCTTCTTCTGCCGCCTTCGACGCCATCAACTCGACTCTGCAGGCTG
ATGCTGCCGAGCGCAAAGAGGCCATCAACAAGGCTAAAGCGGTGGTCGCC
TTCAACATCAAGAACGACAAGGGCAAAGAAGAGAGCTGGTATCTCGACCT
CAAGGACAAGGGTGTTGTGGGCAAGGGTGCTGCTCCCGAAGGAGGAAAAG
CTGATGTGACTCTCTCTCTTTCGGATGCCGACTTCAGCGCCCTCGTAAGC
GGCAAGGCCAATGCCCAGAGGCTCTTTATGGGTGGGAAGCTCAAGATCAA
GGGCAACATTATGAAGGCGACCAAGATGGAGCCTGTCCTGAAGAAGGCCC
AGGGCAAGGCTAAGCTATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_48705CAN33_48705Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48705-T1.exon1CAN33_48705-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_48705-T1.exon2CAN33_48705-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48705-T1.exon3CAN33_48705-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48705-T1.cdsCAN33_48705-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48705-T1CAN33_48705-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR003033
DBxrefInterPro:IPR036527
DBxrefPFAM:PF02036
DBxrefPFAM:PF14864
ProductSCP-2 sterol transfer family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4110782..4111306 +
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