|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4156633..4157320- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48770-T1 ID=CAN33_48770-T1|Name=CAN33_48770-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=688bp|location=Sequence derived from alignment at NKJJ01000022.1:4156633..4157320- (Aspergillus niger FDAARGOS_311)
ATGGACTACAGTATGGAAGACACACAGAATTCGGCCCCTGACGCCCATGA
GGCGTCCAAGCTCAACTCGTCAACCCAGAGAACCGACATTCAGAGCGTCA
CTAAGCGGTTCGTACAATGATGCTGAATGCAGCCTCCAAATCCCTCGGAT
TTCCTCTGGAATCTTGCATACTGATTATCATTCTATCTCGCCAGCCTCCA
AGCCGAGCTGATGCAGCTGATGCTTTCCCCCTCTCCGGGAATCTCGGCCT
TCCCTGACGCCGATGGCAACCTCCTCTCCTGGACTGCCACCATTAGCGGA
CCGGCCGAAACTCCTTACGAAGGACTCACTTTCCGTCTTTCCTTTGCCTT
TCCCAACAACTACCCTTACGCTCCCCCTACCGTTCTGTTCAAAACCCCCA
TCTACCACCCCAATGTCGACTTCTCCGGCCGCATCTGTCTGGACATCCTG
AAGGACAAGTGGAGTGCCGTCTACAACGTGCAGAGTGTTCTCCTCAGTTT
GCAGAGCTTGCTGGGTGAACCTAACAAGTGAGACGAATTCACATCGCAAC
GTTTGCGACCATTCATGCTAACCAATAATTAGCGCAAGCCCTCTCAACGC
CCAAGCCGCTGAACTCTGGGATACCGATCAAGAAGAATACAAGAAACACG
TTATGGCCCGGCACCGCGACATCGAAGACATCGAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4156633..4157320- >CAN33_48770-T1 ID=CAN33_48770-T1|Name=CAN33_48770-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1638bp|location=Sequence derived from alignment at NKJJ01000022.1:4156633..4157320- (Aspergillus niger FDAARGOS_311)
CGCAAGCCCTCTCAACGCCCAAGCCGCTGAACTCTGGGATACCGATCAAG
AAGAATACAAGAAACACGTTATGGCCCGGCACCGCGACATCGAAGACATC
GAGTAACCTCCAAGCCGAGCTGATGCAGCTGATGCTTTCCCCCTCTCCGG
GAATCTCGGCCTTCCCTGACGCCGATGGCAACCTCCTCTCCTGGACTGCC
ACCATTAGCGGACCGGCCGAAACTCCTTACGAAGGACTCACTTTCCGTCT
TTCCTTTGCCTTTCCCAACAACTACCCTTACGCTCCCCCTACCGTTCTGT
TCAAAACCCCCATCTACCACCCCAATGTCGACTTCTCCGGCCGCATCTGT
CTGGACATCCTGAAGGACAAGTGGAGTGCCGTCTACAACGTGCAGAGTGT
TCTCCTCAGTTTGCAGAGCTTGCTGGGTGAACCTAACAAATGGACTACAG
TATGGAAGACACACAGAATTCGGCCCCTGACGCCCATGAGGCGTCCAAGC
TCAACTCGTCAACCCAGAGAACCGACATTCAGAGCGTCACTAAGCGCGCA
AGCCCTCTCAACGCCCAAGCCGCTGAACTCTGGGATACCGATCAAGAAGA
ATACAAGAAACACGTTATGGCCCGGCACCGCGACATCGAAGACATCGAGT
AACCTCCAAGCCGAGCTGATGCAGCTGATGCTTTCCCCCTCTCCGGGAAT
CTCGGCCTTCCCTGACGCCGATGGCAACCTCCTCTCCTGGACTGCCACCA
TTAGCGGACCGGCCGAAACTCCTTACGAAGGACTCACTTTCCGTCTTTCC
TTTGCCTTTCCCAACAACTACCCTTACGCTCCCCCTACCGTTCTGTTCAA
AACCCCCATCTACCACCCCAATGTCGACTTCTCCGGCCGCATCTGTCTGG
ACATCCTGAAGGACAAGTGGAGTGCCGTCTACAACGTGCAGAGTGTTCTC
CTCAGTTTGCAGAGCTTGCTGGGTGAACCTAACAAATGGACTACAGTATG
GAAGACACACAGAATTCGGCCCCTGACGCCCATGAGGCGTCCAAGCTCAA
CTCGTCAACCCAGAGAACCGACATTCAGAGCGTCACTAAGCGCGCAAGCC
CTCTCAACGCCCAAGCCGCTGAACTCTGGGATACCGATCAAGAAGAATAC
AAGAAACACGTTATGGCCCGGCACCGCGACATCGAAGACATCGAGTAACC
TCCAAGCCGAGCTGATGCAGCTGATGCTTTCCCCCTCTCCGGGAATCTCG
GCCTTCCCTGACGCCGATGGCAACCTCCTCTCCTGGACTGCCACCATTAG
CGGACCGGCCGAAACTCCTTACGAAGGACTCACTTTCCGTCTTTCCTTTG
CCTTTCCCAACAACTACCCTTACGCTCCCCCTACCGTTCTGTTCAAAACC
CCCATCTACCACCCCAATGTCGACTTCTCCGGCCGCATCTGTCTGGACAT
CCTGAAGGACAAGTGGAGTGCCGTCTACAACGTGCAGAGTGTTCTCCTCA
GTTTGCAGAGCTTGCTGGGTGAACCTAACAAATGGACTACAGTATGGAAG
ACACACAGAATTCGGCCCCTGACGCCCATGAGGCGTCCAAGCTCAACTCG
TCAACCCAGAGAACCGACATTCAGAGCGTCACTAAGCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023313 |
| DBxref | InterPro:IPR016135 |
| DBxref | InterPro:IPR000608 |
| DBxref | PFAM:PF00179 |
| Product | Ubiquitin-conjugating enzyme E2 11 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4156633..4157320 - |
|
