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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4160886..4163025+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48780-T1 ID=CAN33_48780-T1|Name=CAN33_48780-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2140bp|location=Sequence derived from alignment at NKJJ01000022.1:4160886..4163025+ (Aspergillus niger FDAARGOS_311)
ATGGAGAAACTCCCCGTAGAGATCCTCTGCGAGATTATTGACTGTACGCT
GTTTGCCCCCATTTCTTTCAGGGTCCAGGTTACCCCACATCACCGGTTTC
ATGCCATGTGCTAGACCTTCATTAGCATTAGCTGACGCACCCTTAGATCT
CACCCCACACGAGCGGGTACAACTTCAGTCCGTCTCGAGGCGGCTATTCT
CCGTGGCCCGGGATAACAATCTCTGGAGACTCCACTGCTTCGAAGAGTCA
TGGAGCGCTTCCGGAGCCTTGCGTTCCGCTGCCAACAAGACTTCCGAGAG
CCTAGTCACTAACTCCACCGCTTCCCTCAGCTCATTAGGCCAGACTTCGC
TTCGATCGCTCATACAACCAGGCGCGTCTGGGCTCCGAGACGGTAAAACA
AGCGGCTTGGATCAAACACCGTCCTATGGGCAGAGATCCAGAGCAGCGGC
GTCGTGGGACCCGTCTTACGAAGGGGAAGAGGTGAACTGGTACTCGGAGT
ACATTGCTCGAAATGGCCCGATCTCGCTTAGCTGGATGCAGCAACCCTTC
ACCAGGGCATCACAGGGTGGGAGAAGGGAATACCGTGAGGTCAAAGGAAT
GGGACTGCTTCGAGACTGGAGTACTGCTCGACAGAACAAAGTTGTTGCGC
CCCTTGATGACGGCAGTGTCTGCATTTGGGATCTTAATCACTCGCACTCT
ATTGGATCCCAGAGCACCAAGGGTAAGATTCTTGGGGTCAGCTCGCCGGG
GATCTTGATGGCAAACCGGTTTGGAAGACGAGATAACTCGGGAGCAAAGC
AAGCCTTGGAATTCGTGAATCTCGGAGAATGTGTCAGCGTAGACTCTATG
CGTCGGAGGGCCTACCTGGCTGTCGGGAATATTCTAAACGAGGTAGATCT
CGAAAGTCTCACTGTTATTTCCCAACAACGCTTTCCTTGGTCCGTTTTTG
CCTTGTCCCAGGAGACAGATTATTCTGTACCGTTGACAGCGGCTACCACT
CTGAGTCTTCACATCTACGATGGCAGAATGTCGGCGACGGAGGAGCAAGA
GGCGATCACTCTACGCTGTGAGGAGCCGACCGTTTCGCTAGTCCCCAAAT
CCGAGATCTATTCTCCTCCAGATTCACCCCTTTTGCAACTACAACCAAAC
GGACGACCCCCGCACCGGATACGAAGCCCTGATCTCTCAAAGAACAGTGA
CAACTATGCACCCTTATTCCAACCAGGACCTCTCTCGCTTCTACACCCTC
CCGCGCCGCACGTGAATTCGATCTTCCTCGCCGGCCGTTTTCCAAGCATC
TTACAGTATGACCGCCGCTTTTTCCCACGGCTTCAAAACACAATTCATTC
CGGTGGCCAACTCTGCGGTCTTGCTGCTGTTCCTGCGCCGCGATTCCCTG
TCTCTCCCAACTCTGAGTTCCCCGCCTCCCACAAGTTGGTAGCGTGCGGT
GACTACAAAGGGCGGGGCTCTCTTGAACTTTACAACCTCACGCCCTCCAA
CACTAACGCCAAGAGCGATCCATCGGGCTGCTCGTCCAACCTGTCTACAG
TGTACCAAAATCGGCAGAGTGTCGCTAGATCCAAGGTGCTCTCGGTCGAA
TCACACGGAACCCGAATTGTCTACTCCGATGCAGACGGCAATATCAAATG
GGTTGAGCGTGATGGACGTTCCGAAGTTCGCCGCCTGAACATTAATTCAT
ACCAACCGCAGCGAAGATACTACCCACAGCGCAATGGGGAGACGTCCACT
CATTCGGGAAGCAACGCTAATGCTAATGGTGAAGAGGAAGACCAGACATT
CGGATTATGGGGTAGCCTATCGCGGTCTCGCAGCGAGGGCGAAGTCGCAC
GAAAGGTTCTCCCGACCGGCGGCAGCCTGACAGGCGATGAACTACTTGTC
TGGACAGGAGAACACATTGGACGCGTCCATTTCTCCAATCTCCCGGACAT
GGGTCCAGATTCGGATGAAGAAGATGACGCTATATCTGTTGATGGGCATG
TTGGAGAAGCGGAGCGTGAAGAGCGACGGAACAAACGGCGAGAGCTACGC
CGGCGGGAAGAAGAATATGCCACTATGATGCGGAAGGCACTGGAGAGGCA
GGCCGATGAAGTGAGGCGGATGGGGGGCCTGGGGCTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4160886..4163025+ >CAN33_48780-T1 ID=CAN33_48780-T1|Name=CAN33_48780-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4074bp|location=Sequence derived from alignment at NKJJ01000022.1:4160886..4163025+ (Aspergillus niger FDAARGOS_311)
ATGGAGAAACTCCCCGTAGAGATCCTCTGCGAGATTATTGACTATCTCAC
CCCACACGAGCGGGTACAACTTCAGTCCGTCTCGAGGCGGCTATTCTCCG
TGGCCCGGGATAACAATCTCTGGAGACTCCACTGCTTCGAAGAGTCATGG
AGCGCTTCCGGAGCCTTGCGTTCCGCTGCCAACAAGACTTCCGAGAGCCT
AGTCACTAACTCCACCGCTTCCCTCAGCTCATTAGGCCAGACTTCGCTTC
GATCGCTCATACAACCAGGCGCGTCTGGGCTCCGAGACGGTAAAACAAGC
GGCTTGGATCAAACACCGTCCTATGGGCAGAGATCCAGAGCAGCGGCGTC
GTGGGACCCGTCTTACGAAGGGGAAGAGGTGAACTGGTACTCGGAGTACA
TTGCTCGAAATGGCCCGATCTCGCTTAGCTGGATGCAGCAACCCTTCACC
AGGGCATCACAGGGTGGGAGAAGGGAATACCGTGAGGTCAAAGGAATGGG
ACTGCTTCGAGACTGGAGTACTGCTCGACAGAACAAAGTTGTTGCGCCCC
TTGATGACGGCAGTGTCTGCATTTGGGATCTTAATCACTCGCACTCTATT
GGATCCCAGAGCACCAAGGGTAAGATTCTTGGGGTCAGCTCGCCGGGGAT
CTTGATGGCAAACCGGTTTGGAAGACGAGATAACTCGGGAGCAAAGCAAG
CCTTGGAATTCGTGAATCTCGGAGAATGTGTCAGCGTAGACTCTATGCGT
CGGAGGGCCTACCTGGCTGTCGGGAATATTCTAAACGAGGTAGATCTCGA
AAGTCTCACTGTTATTTCCCAACAACGCTTTCCTTGGTCCGTTTTTGCCT
TGTCCCAGGAGACAGATTATTCTGTACCGTTGACAGCGGCTACCACTCTG
AGTCTTCACATCTACGATGGCAGAATGTCGGCGACGGAGGAGCAAGAGGC
GATCACTCTACGCTGTGAGGAGCCGACCGTTTCGCTAGTCCCCAAATCCG
AGATCTATTCTCCTCCAGATTCACCCCTTTTGCAACTACAACCAAACGGA
CGACCCCCGCACCGGATACGAAGCCCTGATCTCTCAAAGAACAGTGACAA
CTATGCACCCTTATTCCAACCAGGACCTCTCTCGCTTCTACACCCTCCCG
CGCCGCACGTGAATTCGATCTTCCTCGCCGGCCGTTTTCCAAGCATCTTA
CAGTATGACCGCCGCTTTTTCCCACGGCTTCAAAACACAATTCATTCCGG
TGGCCAACTCTGCGGTCTTGCTGCTGTTCCTGCGCCGCGATTCCCTGTCT
CTCCCAACTCTGAGTTCCCCGCCTCCCACAAGTTGGTAGCGTGCGGTGAC
TACAAAGGGCGGGGCTCTCTTGAACTTTACAACCTCACGCCCTCCAACAC
TAACGCCAAGAGCGATCCATCGGGCTGCTCGTCCAACCTGTCTACAGTGT
ACCAAAATCGGCAGAGTGTCGCTAGATCCAAGGTGCTCTCGGTCGAATCA
CACGGAACCCGAATTGTCTACTCCGATGCAGACGGCAATATCAAATGGGT
TGAGCGTGATGGACGTTCCGAAGTTCGCCGCCTGAACATTAATTCATACC
AACCGCAGCGAAGATACTACCCACAGCGCAATGGGGAGACGTCCACTCAT
TCGGGAAGCAACGCTAATGCTAATGGTGAAGAGGAAGACCAGACATTCGG
ATTATGGGGTAGCCTATCGCGGTCTCGCAGCGAGGGCGAAGTCGCACGAA
AGGTTCTCCCGACCGGCGGCAGCCTGACAGGCGATGAACTACTTGTCTGG
ACAGGAGAACACATTGGACGCGTCCATTTCTCCAATCTCCCGGACATGGG
TCCAGATTCGGATGAAGAAGATGACGCTATATCTGTTGATGGGCATGTTG
GAGAAGCGGAGCGTGAAGAGCGACGGAACAAACGGCGAGAGCTACGCCGG
CGGGAAGAAGAATATGCCACTATGATGCGGAAGGCACTGGAGAGGCAGGC
CGATGAAGTGAGGCGGATGGGGGGCCTGGGGCTGTGAATGGAGAAACTCC
CCGTAGAGATCCTCTGCGAGATTATTGACTATCTCACCCCACACGAGCGG
GTACAACTTCAGTCCGTCTCGAGGCGGCTATTCTCCGTGGCCCGGGATAA
CAATCTCTGGAGACTCCACTGCTTCGAAGAGTCATGGAGCGCTTCCGGAG
CCTTGCGTTCCGCTGCCAACAAGACTTCCGAGAGCCTAGTCACTAACTCC
ACCGCTTCCCTCAGCTCATTAGGCCAGACTTCGCTTCGATCGCTCATACA
ACCAGGCGCGTCTGGGCTCCGAGACGGTAAAACAAGCGGCTTGGATCAAA
CACCGTCCTATGGGCAGAGATCCAGAGCAGCGGCGTCGTGGGACCCGTCT
TACGAAGGGGAAGAGGTGAACTGGTACTCGGAGTACATTGCTCGAAATGG
CCCGATCTCGCTTAGCTGGATGCAGCAACCCTTCACCAGGGCATCACAGG
GTGGGAGAAGGGAATACCGTGAGGTCAAAGGAATGGGACTGCTTCGAGAC
TGGAGTACTGCTCGACAGAACAAAGTTGTTGCGCCCCTTGATGACGGCAG
TGTCTGCATTTGGGATCTTAATCACTCGCACTCTATTGGATCCCAGAGCA
CCAAGGGTAAGATTCTTGGGGTCAGCTCGCCGGGGATCTTGATGGCAAAC
CGGTTTGGAAGACGAGATAACTCGGGAGCAAAGCAAGCCTTGGAATTCGT
GAATCTCGGAGAATGTGTCAGCGTAGACTCTATGCGTCGGAGGGCCTACC
TGGCTGTCGGGAATATTCTAAACGAGGTAGATCTCGAAAGTCTCACTGTT
ATTTCCCAACAACGCTTTCCTTGGTCCGTTTTTGCCTTGTCCCAGGAGAC
AGATTATTCTGTACCGTTGACAGCGGCTACCACTCTGAGTCTTCACATCT
ACGATGGCAGAATGTCGGCGACGGAGGAGCAAGAGGCGATCACTCTACGC
TGTGAGGAGCCGACCGTTTCGCTAGTCCCCAAATCCGAGATCTATTCTCC
TCCAGATTCACCCCTTTTGCAACTACAACCAAACGGACGACCCCCGCACC
GGATACGAAGCCCTGATCTCTCAAAGAACAGTGACAACTATGCACCCTTA
TTCCAACCAGGACCTCTCTCGCTTCTACACCCTCCCGCGCCGCACGTGAA
TTCGATCTTCCTCGCCGGCCGTTTTCCAAGCATCTTACAGTATGACCGCC
GCTTTTTCCCACGGCTTCAAAACACAATTCATTCCGGTGGCCAACTCTGC
GGTCTTGCTGCTGTTCCTGCGCCGCGATTCCCTGTCTCTCCCAACTCTGA
GTTCCCCGCCTCCCACAAGTTGGTAGCGTGCGGTGACTACAAAGGGCGGG
GCTCTCTTGAACTTTACAACCTCACGCCCTCCAACACTAACGCCAAGAGC
GATCCATCGGGCTGCTCGTCCAACCTGTCTACAGTGTACCAAAATCGGCA
GAGTGTCGCTAGATCCAAGGTGCTCTCGGTCGAATCACACGGAACCCGAA
TTGTCTACTCCGATGCAGACGGCAATATCAAATGGGTTGAGCGTGATGGA
CGTTCCGAAGTTCGCCGCCTGAACATTAATTCATACCAACCGCAGCGAAG
ATACTACCCACAGCGCAATGGGGAGACGTCCACTCATTCGGGAAGCAACG
CTAATGCTAATGGTGAAGAGGAAGACCAGACATTCGGATTATGGGGTAGC
CTATCGCGGTCTCGCAGCGAGGGCGAAGTCGCACGAAAGGTTCTCCCGAC
CGGCGGCAGCCTGACAGGCGATGAACTACTTGTCTGGACAGGAGAACACA
TTGGACGCGTCCATTTCTCCAATCTCCCGGACATGGGTCCAGATTCGGAT
GAAGAAGATGACGCTATATCTGTTGATGGGCATGTTGGAGAAGCGGAGCG
TGAAGAGCGACGGAACAAACGGCGAGAGCTACGCCGGCGGGAAGAAGAAT
ATGCCACTATGATGCGGAAGGCACTGGAGAGGCAGGCCGATGAAGTGAGG
CGGATGGGGGGCCTGGGGCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | F-box-like family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4160886..4163025 + |
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