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CAN33_48785-T1, CAN33_48785-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48785-T1
Unique NameCAN33_48785-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4163856..4164763+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48785-T1 ID=CAN33_48785-T1|Name=CAN33_48785-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=908bp|location=Sequence derived from alignment at NKJJ01000022.1:4163856..4164763+ (Aspergillus niger FDAARGOS_311)
ATGCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACAC
AATAGCGGCCTTTAGTGAGTCCCCCAGCTCCAGAACTTCCCACCCGCGCC
GGCGCGGGAGGCAAATCCATCCCACCACATTCATTACACATACAAACAAC
ATCCATGTAACTAACAAGCACACCAATGCACCAGAGAACGGCGAATTCAT
CATCGTGCTCGATTCCCAAGACCGCGAAAATGAAGGCGATCTCATCATTG
CCGCTGACTCCATCACTCCGGCGCAGATGGCTTTCCTTGTTCGCCACACA
AGGTAAATCCCCCATTTCCCCCACCTCCTTTCCCCACGAGCACATCAAAT
GTTACTTAACGGGATCACCAATGCTAATGATGGATGAATAGTGGCCTGAT
ATGCGCCCCCGTCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAA
TGGTCACCGAGAACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTC
GACGCAGCTGACCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGC
TCTTGCCTGTAGGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGC
GCCGACCCGGTCATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGG
GAACGCACGGGACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGG
CAAGACGCAGGCGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCG
TACCGGGAGTTCCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGAT
GGATGCTTGAGGTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGA
GGATTTGGTGGAGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATG
GGAACTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4163856..4164763+

>CAN33_48785-T1 ID=CAN33_48785-T1|Name=CAN33_48785-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2097bp|location=Sequence derived from alignment at NKJJ01000022.1:4163856..4164763+ (Aspergillus niger FDAARGOS_311)
ATGCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACAC
AATAGCGGCCTTTAAGAACGGCGAATTCATCATCGTGCTCGATTCCCAAG
ACCGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACTCCG
GCGCAGATGGCTTTCCTTGTTCGCCACACAAGTGGCCTGATATGCGCCCC
CGTCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAATGGTCACCG
AGAACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTCGACGCAGCT
GACCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGCTCTTGCCTG
TAGGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGCGCCGACCCG
GTCATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGGGAACGCACG
GGACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGGCAAGACGCA
GGCGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCGTACCGGGAG
TTCCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGATGGATGCTTG
AGGTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGAGGATTTGGT
GGAGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATGGGAACTGAA
TGCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACACA
ATAGCGGCCTTTAAGAACGGCGAATTCATCATCGTGCTCGATTCCCAAGA
CCGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACTCCGG
CGCAGATGGCTTTCCTTGTTCGCCACACAAGTGGCCTGATATGCGCCCCC
GTCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAATGGTCACCGA
GAACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTCGACGCAGCTG
ACCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGCTCTTGCCTGT
AGGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGCGCCGACCCGG
TCATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGGGAACGCACGG
GACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGGCAAGACGCAG
GCGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCGTACCGGGAGT
TCCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGATGGATGCTTGA
GGTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGAGGATTTGGTG
GAGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATGGGAACTGAAT
GCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACACAA
TAGCGGCCTTTAAGAACGGCGAATTCATCATCGTGCTCGATTCCCAAGAC
CGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATCACTCCGGC
GCAGATGGCTTTCCTTGTTCGCCACACAAGTGGCCTGATATGCGCCCCCG
TCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAATGGTCACCGAG
AACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTCGACGCAGCTGA
CCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGCTCTTGCCTGTA
GGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGCGCCGACCCGGT
CATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGGGAACGCACGGG
ACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGGCAAGACGCAGG
CGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCGTACCGGGAGTT
CCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGATGGATGCTTGAG
GTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGAGGATTTGGTGG
AGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATGGGAACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00086863,4-dihydroxy-2-butanone-4-phosphate synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RIB3CAN33_48785Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48785-T1.exon1CAN33_48785-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_48785-T1.exon2CAN33_48785-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48785-T1.exon3CAN33_48785-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48785-T1.cdsCAN33_48785-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48785-T1CAN33_48785-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263Z8I
DBxrefInterPro:IPR017945
DBxrefInterPro:IPR000422
DBxrefPFAM:PF00926
Product4-dihydroxy 2-butanone 4-phosphate synthase
Product3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4163856..4164763 +
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