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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4182240..4183764- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_48815-T1 ID=CAN33_48815-T1|Name=CAN33_48815-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1525bp|location=Sequence derived from alignment at NKJJ01000022.1:4182240..4183764- (Aspergillus niger FDAARGOS_311)
ATGCGGCACAGTTTTGATTCTTCAAACCCCCAAACCCGCCGGAATGCTCC
CTATAAGCGTAGGGCCGTTCCTCAACTCCCTACTCCCAGTCGATTAAACC
CAAGTGCCGTCATTGATCAAAGATTAGTTGAAGGTGCACAACAGGAACCT
TTGTTCAACCGACTACCCAGAGAGGGCTCTAGTAGTTATCAGCCCAATCT
GCAGTTGTTTTCTCGGGATGAAAATCTAGAGCTGGATGCCTTTGGTATGC
CGCTCAATTACCCCACAGTCACATCTAAGAATGCCTAGATCAGGCTAACC
ATTCAAGTCTTAGATCTTGAACTTCTGGCTCGATTAGATGAGCAAGTGCA
AAGTCCTTATACAGTGGGCTCTGTTGCAGACCGTGGCTCGTTGTCCAGGC
CTTCCCAAAGAACAGACTATAACCGGGTCTCTCGTTTCTTTCAAGGTCAG
GATACATGCTTGATATAAGGTTCACGGAGCTCAGCCCTGAAGGATTGAGC
TAACATGGCTTGACACAACAGCAGGACCTCATGCCACTCCTCGTCAGAGT
TTCGGCTCTAGTTCTCCGGATACGGGTGTAGGATCGCCATCTAGTCCACT
GACAAGAAGACGAGCTGGGAGATTGGAAGCACATGCTCCTGAACATGACT
TCGAGGACAACATTGATCCTCACAATTTCTCCAATTGTGAGATACCACTT
TCCCACCCTGCTGAGTTATCGTCAGTTGTCCGTCAAGACCGGCAGAGAGG
CCCTTTCCAGCAACATTTTCCGGTTTCAATTCGAGGAATCGTCCTCGTAT
CTGTGCATGAACTCCCAGATAAATATCGGTCAATCTTTCCGTTCCCCGTA
TTTAATGCCGTACAATCAAAATGCTTCCAATCAGCCTACAAGACCGATAG
CAACATTGTCCTTGCCGCACCCACGGGCAGTGGGAAGACCGCTATAATGG
AACTGGCAATTTGTCGATTACTCAACTGCCTCAAAGACGAACGGTTCAAG
GTTATATACCAGGCACCTACCAAGTCTCTTTGTTCTGAGAAGTTCAGAGA
CTGGAGTAGAAAATTCAATACATTAGGGCTGCAATGTGCAGAGTTGACGG
GGGATACAGACCACACTCAACTGAGGAGTGTTCAGAACAGCCAAGTTATT
ATCACGACACCCGAGAAGTGGGACAGCATGACGCGAAAGTGGAAGGATCA
TGCCCGGTTAATGCAGCTCGTCAGGTTATTCCTCATTGACGAGGTCCATA
TCCTCAAGGAAGCTCGCGGTGCAACCCTAGAAGCTGTCGTATCCCGCATG
AAAGCAAACGGGTCGAACGTTCGCTTTGTCGCTCTGAGTGCTACTGTTCC
AAACTCAGAGGACATCGCAACTTGGATAGGTAGGGACCCAGTAAATCAGC
ATGTGCCTGCCCACAGAGAGCACTTTGGGGAAGACTTTCGCCCTGTGAAG
TTGCAGAAGTTCGTGTACGGCTACCAGTCGCACGCCAACGACTTTGCATT
CGATAGAATGTGCACCTCTAAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4182240..4183764- >CAN33_48815-T1 ID=CAN33_48815-T1|Name=CAN33_48815-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4140bp|location=Sequence derived from alignment at NKJJ01000022.1:4182240..4183764- (Aspergillus niger FDAARGOS_311)
CAGGACCTCATGCCACTCCTCGTCAGAGTTTCGGCTCTAGTTCTCCGGAT
ACGGGTGTAGGATCGCCATCTAGTCCACTGACAAGAAGACGAGCTGGGAG
ATTGGAAGCACATGCTCCTGAACATGACTTCGAGGACAACATTGATCCTC
ACAATTTCTCCAATTGTGAGATACCACTTTCCCACCCTGCTGAGTTATCG
TCAGTTGTCCGTCAAGACCGGCAGAGAGGCCCTTTCCAGCAACATTTTCC
GGTTTCAATTCGAGGAATCGTCCTCGTATCTGTGCATGAACTCCCAGATA
AATATCGGTCAATCTTTCCGTTCCCCGTATTTAATGCCGTACAATCAAAA
TGCTTCCAATCAGCCTACAAGACCGATAGCAACATTGTCCTTGCCGCACC
CACGGGCAGTGGGAAGACCGCTATAATGGAACTGGCAATTTGTCGATTAC
TCAACTGCCTCAAAGACGAACGGTTCAAGGTTATATACCAGGCACCTACC
AAGTCTCTTTGTTCTGAGAAGTTCAGAGACTGGAGTAGAAAATTCAATAC
ATTAGGGCTGCAATGTGCAGAGTTGACGGGGGATACAGACCACACTCAAC
TGAGGAGTGTTCAGAACAGCCAAGTTATTATCACGACACCCGAGAAGTGG
GACAGCATGACGCGAAAGTGGAAGGATCATGCCCGGTTAATGCAGCTCGT
CAGGTTATTCCTCATTGACGAGGTCCATATCCTCAAGGAAGCTCGCGGTG
CAACCCTAGAAGCTGTCGTATCCCGCATGAAAGCAAACGGGTCGAACGTT
CGCTTTGTCGCTCTGAGTGCTACTGTTCCAAACTCAGAGGACATCGCAAC
TTGGATAGGTAGGGACCCAGTAAATCAGCATGTGCCTGCCCACAGAGAGC
ACTTTGGGGAAGACTTTCGCCCTGTGAAGTTGCAGAAGTTCGTGTACGGC
TACCAGTCGCACGCCAACGACTTTGCATTCGATAGAATGTGCACCTCTAA
GTAAATCTTGAACTTCTGGCTCGATTAGATGAGCAAGTGCAAAGTCCTTA
TACAGTGGGCTCTGTTGCAGACCGTGGCTCGTTGTCCAGGCCTTCCCAAA
GAACAGACTATAACCGGGTCTCTCGTTTCTTTCAAGATGCGGCACAGTTT
TGATTCTTCAAACCCCCAAACCCGCCGGAATGCTCCCTATAAGCGTAGGG
CCGTTCCTCAACTCCCTACTCCCAGTCGATTAAACCCAAGTGCCGTCATT
GATCAAAGATTAGTTGAAGGTGCACAACAGGAACCTTTGTTCAACCGACT
ACCCAGAGAGGGCTCTAGTAGTTATCAGCCCAATCTGCAGTTGTTTTCTC
GGGATGAAAATCTAGAGCTGGATGCCTTTGCAGGACCTCATGCCACTCCT
CGTCAGAGTTTCGGCTCTAGTTCTCCGGATACGGGTGTAGGATCGCCATC
TAGTCCACTGACAAGAAGACGAGCTGGGAGATTGGAAGCACATGCTCCTG
AACATGACTTCGAGGACAACATTGATCCTCACAATTTCTCCAATTGTGAG
ATACCACTTTCCCACCCTGCTGAGTTATCGTCAGTTGTCCGTCAAGACCG
GCAGAGAGGCCCTTTCCAGCAACATTTTCCGGTTTCAATTCGAGGAATCG
TCCTCGTATCTGTGCATGAACTCCCAGATAAATATCGGTCAATCTTTCCG
TTCCCCGTATTTAATGCCGTACAATCAAAATGCTTCCAATCAGCCTACAA
GACCGATAGCAACATTGTCCTTGCCGCACCCACGGGCAGTGGGAAGACCG
CTATAATGGAACTGGCAATTTGTCGATTACTCAACTGCCTCAAAGACGAA
CGGTTCAAGGTTATATACCAGGCACCTACCAAGTCTCTTTGTTCTGAGAA
GTTCAGAGACTGGAGTAGAAAATTCAATACATTAGGGCTGCAATGTGCAG
AGTTGACGGGGGATACAGACCACACTCAACTGAGGAGTGTTCAGAACAGC
CAAGTTATTATCACGACACCCGAGAAGTGGGACAGCATGACGCGAAAGTG
GAAGGATCATGCCCGGTTAATGCAGCTCGTCAGGTTATTCCTCATTGACG
AGGTCCATATCCTCAAGGAAGCTCGCGGTGCAACCCTAGAAGCTGTCGTA
TCCCGCATGAAAGCAAACGGGTCGAACGTTCGCTTTGTCGCTCTGAGTGC
TACTGTTCCAAACTCAGAGGACATCGCAACTTGGATAGGTAGGGACCCAG
TAAATCAGCATGTGCCTGCCCACAGAGAGCACTTTGGGGAAGACTTTCGC
CCTGTGAAGTTGCAGAAGTTCGTGTACGGCTACCAGTCGCACGCCAACGA
CTTTGCATTCGATAGAATGTGCACCTCTAAGTAAATCTTGAACTTCTGGC
TCGATTAGATGAGCAAGTGCAAAGTCCTTATACAGTGGGCTCTGTTGCAG
ACCGTGGCTCGTTGTCCAGGCCTTCCCAAAGAACAGACTATAACCGGGTC
TCTCGTTTCTTTCAAGATGCGGCACAGTTTTGATTCTTCAAACCCCCAAA
CCCGCCGGAATGCTCCCTATAAGCGTAGGGCCGTTCCTCAACTCCCTACT
CCCAGTCGATTAAACCCAAGTGCCGTCATTGATCAAAGATTAGTTGAAGG
TGCACAACAGGAACCTTTGTTCAACCGACTACCCAGAGAGGGCTCTAGTA
GTTATCAGCCCAATCTGCAGTTGTTTTCTCGGGATGAAAATCTAGAGCTG
GATGCCTTTGCAGGACCTCATGCCACTCCTCGTCAGAGTTTCGGCTCTAG
TTCTCCGGATACGGGTGTAGGATCGCCATCTAGTCCACTGACAAGAAGAC
GAGCTGGGAGATTGGAAGCACATGCTCCTGAACATGACTTCGAGGACAAC
ATTGATCCTCACAATTTCTCCAATTGTGAGATACCACTTTCCCACCCTGC
TGAGTTATCGTCAGTTGTCCGTCAAGACCGGCAGAGAGGCCCTTTCCAGC
AACATTTTCCGGTTTCAATTCGAGGAATCGTCCTCGTATCTGTGCATGAA
CTCCCAGATAAATATCGGTCAATCTTTCCGTTCCCCGTATTTAATGCCGT
ACAATCAAAATGCTTCCAATCAGCCTACAAGACCGATAGCAACATTGTCC
TTGCCGCACCCACGGGCAGTGGGAAGACCGCTATAATGGAACTGGCAATT
TGTCGATTACTCAACTGCCTCAAAGACGAACGGTTCAAGGTTATATACCA
GGCACCTACCAAGTCTCTTTGTTCTGAGAAGTTCAGAGACTGGAGTAGAA
AATTCAATACATTAGGGCTGCAATGTGCAGAGTTGACGGGGGATACAGAC
CACACTCAACTGAGGAGTGTTCAGAACAGCCAAGTTATTATCACGACACC
CGAGAAGTGGGACAGCATGACGCGAAAGTGGAAGGATCATGCCCGGTTAA
TGCAGCTCGTCAGGTTATTCCTCATTGACGAGGTCCATATCCTCAAGGAA
GCTCGCGGTGCAACCCTAGAAGCTGTCGTATCCCGCATGAAAGCAAACGG
GTCGAACGTTCGCTTTGTCGCTCTGAGTGCTACTGTTCCAAACTCAGAGG
ACATCGCAACTTGGATAGGTAGGGACCCAGTAAATCAGCATGTGCCTGCC
CACAGAGAGCACTTTGGGGAAGACTTTCGCCCTGTGAAGTTGCAGAAGTT
CGTGTACGGCTACCAGTCGCACGCCAACGACTTTGCATTCGATAGAATGT
GCACCTCTAAGTAAATCTTGAACTTCTGGCTCGATTAGATGAGCAAGTGC
AAAGTCCTTATACAGTGGGCTCTGTTGCAGACCGTGGCTCGTTGTCCAGG
CCTTCCCAAAGAACAGACTATAACCGGGTCTCTCGTTTCTTTCAAGATGC
GGCACAGTTTTGATTCTTCAAACCCCCAAACCCGCCGGAATGCTCCCTAT
AAGCGTAGGGCCGTTCCTCAACTCCCTACTCCCAGTCGATTAAACCCAAG
TGCCGTCATTGATCAAAGATTAGTTGAAGGTGCACAACAGGAACCTTTGT
TCAACCGACTACCCAGAGAGGGCTCTAGTAGTTATCAGCCCAATCTGCAG
TTGTTTTCTCGGGATGAAAATCTAGAGCTGGATGCCTTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00270 |
| Product | DEAD/DEAH box helicase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4182240..4183764 - |
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