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CAN33_48970-T1, CAN33_48970-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_48970-T1
Unique NameCAN33_48970-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4286980..4287774-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_48970-T1 ID=CAN33_48970-T1|Name=CAN33_48970-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=795bp|location=Sequence derived from alignment at NKJJ01000022.1:4286980..4287774- (Aspergillus niger FDAARGOS_311)
ATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTCATCGCGACC
CACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTGAAGCTCATG
GTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCTGCCATCAAT
GCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGCCGACCTCGA
GGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGACCCGGTTCA
GTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAATGCGTTCTGT
GTGGACTTTCCGGAGGTAATTGCGACGGTGAATAATGTCTGTCTTCCCTC
TATAAGCTGACGATCGGTTACAGGCGCCCATTCCCGAATCTTTTCGGAGA
GCCAAGCAAGCAGAGGCACAGAATGGTATGGTCACAGCTGCGCGAAAGGG
AGATCCAACTACTAATAGCACGCATAGAGGCAGAAGCAGAACAGCTGAAA
GCGACCACTGAAGCGGAGATGACATTCATGTGAGATCTGGTTACTCCCCG
GGCCAGTTGTTTCATGCTTTTTTGCATCATACTAACGACATGACGTACTT
AGGACTACGGATACTTCCTTCATCGAACATCCTCCAAGCACCGTCTCCTC
CAAGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGCACCACCAGAGGAT
CTACGCGTGGTTCGACAAGCAGTCGCTATGCGACACGGGGCACCAATCGT
GGCGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGATTACGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4286980..4287774-

>CAN33_48970-T1 ID=CAN33_48970-T1|Name=CAN33_48970-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2448bp|location=Sequence derived from alignment at NKJJ01000022.1:4286980..4287774- (Aspergillus niger FDAARGOS_311)
GACTACGGATACTTCCTTCATCGAACATCCTCCAAGCACCGTCTCCTCCA
AGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGCACCACCAGAGGATCT
ACGCGTGGTTCGACAAGCAGTCGCTATGCGACACGGGGCACCAATCGTGG
CGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGATTACGGTGAAGGCAGA
AGCAGAACAGCTGAAAGCGACCACTGAAGCGGAGATGACATTCATGCGCC
CATTCCCGAATCTTTTCGGAGAGCCAAGCAAGCAGAGGCACAGAATGATG
GATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTCATCGCGACCCAC
GACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTGAAGCTCATGGTT
ATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCTGCCATCAATGCC
TTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGCCGACCTCGAGGC
CAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGACCCGGTTCAGTG
AAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAATGCGTTCTGTGTG
GACTTTCCGGAGGACTACGGATACTTCCTTCATCGAACATCCTCCAAGCA
CCGTCTCCTCCAAGCCTTCGGCAAAAATCCCAGCCCCGTCGCGTGGCACC
ACCAGAGGATCTACGCGTGGTTCGACAAGCAGTCGCTATGCGACACGGGG
CACCAATCGTGGCGCCCGTCCAAGCGCATTGCCCCGCGGACGAGGATTAC
GGTGAAGGCAGAAGCAGAACAGCTGAAAGCGACCACTGAAGCGGAGATGA
CATTCATGCGCCCATTCCCGAATCTTTTCGGAGAGCCAAGCAAGCAGAGG
CACAGAATGATGGATGCTTTTTCCCGCTCATCGTCTCGCCCACGGCCCTC
ATCGCGACCCACGACCCCCCTAAGACCCAGTTCCCGGTCGTCGATCCGTG
AAGCTCATGGTTATGGCAACAGTATTGGTATGGCAGGCTACACCCAGCCT
GCCATCAATGCCTTAGAGCCCCAGTTTGCAGAGCTTGCAGACTCCATGGC
CGACCTCGAGGCCAACTTCATGCACCTTCAGCTGATGCACGAAAGTTTGA
CCCGGTTCAGTGAAAGCTTTGCCAGTTTTCTCTATGGTTTGAACATGAAT
GCGTTCTGTGTGGACTTTCCGGAGGACTACGGATACTTCCTTCATCGAAC
ATCCTCCAAGCACCGTCTCCTCCAAGCCTTCGGCAAAAATCCCAGCCCCG
TCGCGTGGCACCACCAGAGGATCTACGCGTGGTTCGACAAGCAGTCGCTA
TGCGACACGGGGCACCAATCGTGGCGCCCGTCCAAGCGCATTGCCCCGCG
GACGAGGATTACGGTGAAGGCAGAAGCAGAACAGCTGAAAGCGACCACTG
AAGCGGAGATGACATTCATGCGCCCATTCCCGAATCTTTTCGGAGAGCCA
AGCAAGCAGAGGCACAGAATGATGGATGCTTTTTCCCGCTCATCGTCTCG
CCCACGGCCCTCATCGCGACCCACGACCCCCCTAAGACCCAGTTCCCGGT
CGTCGATCCGTGAAGCTCATGGTTATGGCAACAGTATTGGTATGGCAGGC
TACACCCAGCCTGCCATCAATGCCTTAGAGCCCCAGTTTGCAGAGCTTGC
AGACTCCATGGCCGACCTCGAGGCCAACTTCATGCACCTTCAGCTGATGC
ACGAAAGTTTGACCCGGTTCAGTGAAAGCTTTGCCAGTTTTCTCTATGGT
TTGAACATGAATGCGTTCTGTGTGGACTTTCCGGAGGACTACGGATACTT
CCTTCATCGAACATCCTCCAAGCACCGTCTCCTCCAAGCCTTCGGCAAAA
ATCCCAGCCCCGTCGCGTGGCACCACCAGAGGATCTACGCGTGGTTCGAC
AAGCAGTCGCTATGCGACACGGGGCACCAATCGTGGCGCCCGTCCAAGCG
CATTGCCCCGCGGACGAGGATTACGGTGAAGGCAGAAGCAGAACAGCTGA
AAGCGACCACTGAAGCGGAGATGACATTCATGCGCCCATTCCCGAATCTT
TTCGGAGAGCCAAGCAAGCAGAGGCACAGAATGATGGATGCTTTTTCCCG
CTCATCGTCTCGCCCACGGCCCTCATCGCGACCCACGACCCCCCTAAGAC
CCAGTTCCCGGTCGTCGATCCGTGAAGCTCATGGTTATGGCAACAGTATT
GGTATGGCAGGCTACACCCAGCCTGCCATCAATGCCTTAGAGCCCCAGTT
TGCAGAGCTTGCAGACTCCATGGCCGACCTCGAGGCCAACTTCATGCACC
TTCAGCTGATGCACGAAAGTTTGACCCGGTTCAGTGAAAGCTTTGCCAGT
TTTCTCTATGGTTTGAACATGAATGCGTTCTGTGTGGACTTTCCGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042729DASH complex
GO:0072686mitotic spindle
Vocabulary: Biological Process
TermDefinition
GO:0008608attachment of spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_48970CAN33_48970Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48970-T1CAN33_48970-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48970-T1.cdsCAN33_48970-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_48970-T1.exon4CAN33_48970-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_48970-T1.exon3CAN33_48970-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_48970-T1.exon2CAN33_48970-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_48970-T1.exon1CAN33_48970-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265J36
DBxrefInterPro:IPR013962
DBxrefPFAM:PF08653
ProductDASH complex subunit Dam1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4286980..4287774 -
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