You are here

Home

CAN33_49075-T1, CAN33_49075-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_49075-T1
Unique NameCAN33_49075-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4346932..4348176+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_49075-T1 ID=CAN33_49075-T1|Name=CAN33_49075-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1245bp|location=Sequence derived from alignment at NKJJ01000022.1:4346932..4348176+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCTTCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAG
CTCCATGAGGAAGCTGTATGCTTTCCGTCACCTATATTGGTCAATCAAGC
TTACATATGGCTAATTTCTTCAATGCAACAGCTACCCCGAGTCATTGGCA
GATAAGAGCTGGGACAACACCGGCCGTAAGCTCTCATCCGTCCTCCGCCA
ATCTTCCATCCCATTAACTTTATATCCCAGTCCTCCTCGAAGCGCCCTTC
GACCACACCCGCAGACAGAAAAACTCAGTCCTCCTAGCAATTGACCTCAC
CAAAGCAGTTGCAGACGAAGCAATTGCCCGTCGCGACTCAGTAGTCGTAG
CCTACCGTACGCAATGCCCCCTACACCTGCACACCCCATCACCTACTCAC
ACAGTTCCTCCGCAGACCCGATCATCTTCCGTGGCCTCAAATCCATCACC
TTCAACGATCCTCAACAATCATCCCTCCTCCGTCTCGCCCAAGAGGGCAT
CAGCGTCTACTCCCCGCACACAGCCATCGACGCAACCCCCGGCGGCATGG
CCGACTGGCTCTGCGACATCGTCACCGGCGCCATCGCCCCAACAAGCACC
ACCAAGCCCACTATCCAGAAATCCTCCTCAACACACTACTCCCACGCCAC
CTTCCCCGACCCACAGCCTGCTTCCCCCGCGACTCCCGTGCCCCATGTCC
GAACCACAATCATCCCCTCTCCGCCCCCAGTGCCCGAGGGCATGGACTCA
GCGGGAATGGGGCGCATCGTCACCTTCGACGAGCCCCAGCCCCTGACTGC
CGTCGTGGACCGCATTGCCCAGGGCGTTGGATATCCCGGCGGTATCCCCA
TCGCTATTCCGCAGACCGCCTCGGTTGAGGACCTGAAGATCCGCACAGTC
GGCGTATGTCCCGGCTCCGGGTCGAGTATCCTGCTGAAGGGCACGGGCGG
GAAGATCCCCGATCTGCTTTTCACTGGCGAGTTGAGTCACCATGAGGCGT
TGGCGGCCGTGGAGCGTGGGTCGGTTGTGGTTGCGCTGGCGCATTCGAAT
ACGGAGCGCGGGTATCTGCGTGCAGTGATGCGGGAGAAGTTGGCAGATGC
GGTGAAGAAGGAGTGGGAGGCGCAGAGAGAGGAGGGTTTGAAGGGTGGTG
CGGTGCTGAAGGAGGTCTTTGAGGATGCGGAGTGTGTTGTGGATGTTAGT
GAGAAGGATCGTGATCCGTATGGTATTATGATTCGACAGGTCTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:4346932..4348176+

>CAN33_49075-T1 ID=CAN33_49075-T1|Name=CAN33_49075-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4260bp|location=Sequence derived from alignment at NKJJ01000022.1:4346932..4348176+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCTTCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAG
CTCCATGAGGAAGCTCTACCCCGAGTCATTGGCAGATAAGAGCTGGGACA
ACACCGGCCTCCTCCTCGAAGCGCCCTTCGACCACACCCGCAGACAGAAA
AACTCAGTCCTCCTAGCAATTGACCTCACCAAAGCAGTTGCAGACGAAGC
AATTGCCCGTCGCGACTCAGTAGTCGTAGCCTACCACCCGATCATCTTCC
GTGGCCTCAAATCCATCACCTTCAACGATCCTCAACAATCATCCCTCCTC
CGTCTCGCCCAAGAGGGCATCAGCGTCTACTCCCCGCACACAGCCATCGA
CGCAACCCCCGGCGGCATGGCCGACTGGCTCTGCGACATCGTCACCGGCG
CCATCGCCCCAACAAGCACCACCAAGCCCACTATCCAGAAATCCTCCTCA
ACACACTACTCCCACGCCACCTTCCCCGACCCACAGCCTGCTTCCCCCGC
GACTCCCGTGCCCCATGTCCGAACCACAATCATCCCCTCTCCGCCCCCAG
TGCCCGAGGGCATGGACTCAGCGGGAATGGGGCGCATCGTCACCTTCGAC
GAGCCCCAGCCCCTGACTGCCGTCGTGGACCGCATTGCCCAGGGCGTTGG
ATATCCCGGCGGTATCCCCATCGCTATTCCGCAGACCGCCTCGGTTGAGG
ACCTGAAGATCCGCACAGTCGGCGTATGTCCCGGCTCCGGGTCGAGTATC
CTGCTGAAGGGCACGGGCGGGAAGATCCCCGATCTGCTTTTCACTGGCGA
GTTGAGTCACCATGAGGCGTTGGCGGCCGTGGAGCGTGGGTCGGTTGTGG
TTGCGCTGGCGCATTCGAATACGGAGCGCGGGTATCTGCGTGCAGTGATG
CGGGAGAAGTTGGCAGATGCGGTGAAGAAGGAGTGGGAGGCGCAGAGAGA
GGAGGGTTTGAAGGGTGGTGCGGTGCTGAAGGAGGTCTTTGAGGATGCGG
AGTGTGTTGTGGATGTTAGTGAGAAGGATCGTGATCCGTATGGTATTATG
ATTCGACAGGTCTAGATGTCTGCTTCATACCCCACTTCATCGCCATTCAC
GCAGGCAGTGGTGAGCTCCATGAGGAAGCTCTACCCCGAGTCATTGGCAG
ATAAGAGCTGGGACAACACCGGCCTCCTCCTCGAAGCGCCCTTCGACCAC
ACCCGCAGACAGAAAAACTCAGTCCTCCTAGCAATTGACCTCACCAAAGC
AGTTGCAGACGAAGCAATTGCCCGTCGCGACTCAGTAGTCGTAGCCTACC
ACCCGATCATCTTCCGTGGCCTCAAATCCATCACCTTCAACGATCCTCAA
CAATCATCCCTCCTCCGTCTCGCCCAAGAGGGCATCAGCGTCTACTCCCC
GCACACAGCCATCGACGCAACCCCCGGCGGCATGGCCGACTGGCTCTGCG
ACATCGTCACCGGCGCCATCGCCCCAACAAGCACCACCAAGCCCACTATC
CAGAAATCCTCCTCAACACACTACTCCCACGCCACCTTCCCCGACCCACA
GCCTGCTTCCCCCGCGACTCCCGTGCCCCATGTCCGAACCACAATCATCC
CCTCTCCGCCCCCAGTGCCCGAGGGCATGGACTCAGCGGGAATGGGGCGC
ATCGTCACCTTCGACGAGCCCCAGCCCCTGACTGCCGTCGTGGACCGCAT
TGCCCAGGGCGTTGGATATCCCGGCGGTATCCCCATCGCTATTCCGCAGA
CCGCCTCGGTTGAGGACCTGAAGATCCGCACAGTCGGCGTATGTCCCGGC
TCCGGGTCGAGTATCCTGCTGAAGGGCACGGGCGGGAAGATCCCCGATCT
GCTTTTCACTGGCGAGTTGAGTCACCATGAGGCGTTGGCGGCCGTGGAGC
GTGGGTCGGTTGTGGTTGCGCTGGCGCATTCGAATACGGAGCGCGGGTAT
CTGCGTGCAGTGATGCGGGAGAAGTTGGCAGATGCGGTGAAGAAGGAGTG
GGAGGCGCAGAGAGAGGAGGGTTTGAAGGGTGGTGCGGTGCTGAAGGAGG
TCTTTGAGGATGCGGAGTGTGTTGTGGATGTTAGTGAGAAGGATCGTGAT
CCGTATGGTATTATGATTCGACAGGTCTAGATGTCTGCTTCATACCCCAC
TTCATCGCCATTCACGCAGGCAGTGGTGAGCTCCATGAGGAAGCTCTACC
CCGAGTCATTGGCAGATAAGAGCTGGGACAACACCGGCCTCCTCCTCGAA
GCGCCCTTCGACCACACCCGCAGACAGAAAAACTCAGTCCTCCTAGCAAT
TGACCTCACCAAAGCAGTTGCAGACGAAGCAATTGCCCGTCGCGACTCAG
TAGTCGTAGCCTACCACCCGATCATCTTCCGTGGCCTCAAATCCATCACC
TTCAACGATCCTCAACAATCATCCCTCCTCCGTCTCGCCCAAGAGGGCAT
CAGCGTCTACTCCCCGCACACAGCCATCGACGCAACCCCCGGCGGCATGG
CCGACTGGCTCTGCGACATCGTCACCGGCGCCATCGCCCCAACAAGCACC
ACCAAGCCCACTATCCAGAAATCCTCCTCAACACACTACTCCCACGCCAC
CTTCCCCGACCCACAGCCTGCTTCCCCCGCGACTCCCGTGCCCCATGTCC
GAACCACAATCATCCCCTCTCCGCCCCCAGTGCCCGAGGGCATGGACTCA
GCGGGAATGGGGCGCATCGTCACCTTCGACGAGCCCCAGCCCCTGACTGC
CGTCGTGGACCGCATTGCCCAGGGCGTTGGATATCCCGGCGGTATCCCCA
TCGCTATTCCGCAGACCGCCTCGGTTGAGGACCTGAAGATCCGCACAGTC
GGCGTATGTCCCGGCTCCGGGTCGAGTATCCTGCTGAAGGGCACGGGCGG
GAAGATCCCCGATCTGCTTTTCACTGGCGAGTTGAGTCACCATGAGGCGT
TGGCGGCCGTGGAGCGTGGGTCGGTTGTGGTTGCGCTGGCGCATTCGAAT
ACGGAGCGCGGGTATCTGCGTGCAGTGATGCGGGAGAAGTTGGCAGATGC
GGTGAAGAAGGAGTGGGAGGCGCAGAGAGAGGAGGGTTTGAAGGGTGGTG
CGGTGCTGAAGGAGGTCTTTGAGGATGCGGAGTGTGTTGTGGATGTTAGT
GAGAAGGATCGTGATCCGTATGGTATTATGATTCGACAGGTCTAGATGTC
TGCTTCATACCCCACTTCATCGCCATTCACGCAGGCAGTGGTGAGCTCCA
TGAGGAAGCTCTACCCCGAGTCATTGGCAGATAAGAGCTGGGACAACACC
GGCCTCCTCCTCGAAGCGCCCTTCGACCACACCCGCAGACAGAAAAACTC
AGTCCTCCTAGCAATTGACCTCACCAAAGCAGTTGCAGACGAAGCAATTG
CCCGTCGCGACTCAGTAGTCGTAGCCTACCACCCGATCATCTTCCGTGGC
CTCAAATCCATCACCTTCAACGATCCTCAACAATCATCCCTCCTCCGTCT
CGCCCAAGAGGGCATCAGCGTCTACTCCCCGCACACAGCCATCGACGCAA
CCCCCGGCGGCATGGCCGACTGGCTCTGCGACATCGTCACCGGCGCCATC
GCCCCAACAAGCACCACCAAGCCCACTATCCAGAAATCCTCCTCAACACA
CTACTCCCACGCCACCTTCCCCGACCCACAGCCTGCTTCCCCCGCGACTC
CCGTGCCCCATGTCCGAACCACAATCATCCCCTCTCCGCCCCCAGTGCCC
GAGGGCATGGACTCAGCGGGAATGGGGCGCATCGTCACCTTCGACGAGCC
CCAGCCCCTGACTGCCGTCGTGGACCGCATTGCCCAGGGCGTTGGATATC
CCGGCGGTATCCCCATCGCTATTCCGCAGACCGCCTCGGTTGAGGACCTG
AAGATCCGCACAGTCGGCGTATGTCCCGGCTCCGGGTCGAGTATCCTGCT
GAAGGGCACGGGCGGGAAGATCCCCGATCTGCTTTTCACTGGCGAGTTGA
GTCACCATGAGGCGTTGGCGGCCGTGGAGCGTGGGTCGGTTGTGGTTGCG
CTGGCGCATTCGAATACGGAGCGCGGGTATCTGCGTGCAGTGATGCGGGA
GAAGTTGGCAGATGCGGTGAAGAAGGAGTGGGAGGCGCAGAGAGAGGAGG
GTTTGAAGGGTGGTGCGGTGCTGAAGGAGGTCTTTGAGGATGCGGAGTGT
GTTGTGGATGTTAGTGAGAAGGATCGTGATCCGTATGGTATTATGATTCG
ACAGGTCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_49075CAN33_49075Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49075-T1.exon1CAN33_49075-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_49075-T1.exon2CAN33_49075-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_49075-T1.exon3CAN33_49075-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_49075-T1.exon4CAN33_49075-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49075-T1.cdsCAN33_49075-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49075-T1CAN33_49075-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09263UQF
DBxrefInterPro:IPR036069
DBxrefInterPro:IPR002678
DBxrefPFAM:PF01784
ProductNIF3 (NGG1p interacting factor 3) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4346932..4348176 +
Powered by Drupal