|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4399585..4400993- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_49140-T1 ID=CAN33_49140-T1|Name=CAN33_49140-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1409bp|location=Sequence derived from alignment at NKJJ01000022.1:4399585..4400993- (Aspergillus niger FDAARGOS_311)
ATGGGCAACGACGAAATCTCCGATTTCGAAAAGCAGCGCCTAGCCAACAT
CGCCGAACGCGATGCGCTACTCAAAAAGCTGACCATGGAGGCGCAGTCCT
CTGGGCTTTTTCCGCCGAAGATGCCCAAACCAGCAGCGAAGGATCAATCG
CGGACGAAAAAGAAGACTCCTGTGAAGAAAGTCAAGGAGGAGACGCCGCA
GCCGCGGCGCATGTCATCCCGGCTGAGGGGCATCGCGGCGGAAAGCGAAG
TCGCGAAGCGCAAAGCTGAAGAAGAGTACGAGGCGCGGCAGGAAGCGGAG
CGCGCGAAACGAGTTCGCAAGTCGGATAACTTCTCGTTCAGTGATATTAT
GGTGAACGGGCAGAAGTTGCCTGCGGATGGATTGATCGGAGTAGATGTAG
TTACCAAGGGCGTGGCGATACCGTACCAGAGGACGTTTGGCGATGATGAG
ATCCAGAAGACGACGGATAAGGATCTGAAGGCGCTGAGGAAGGAGATGAA
TGGATTGACGCTCTGGGAGGCGTGGGAACCTAACCGTATGTCTCTCTTTC
TTTCCCTACTACCATCTTCCATTGGCTAACTAACCTCCATAACAGGCATT
AAATTGACCCCCGAACGAGTCTACACCATGACTTTCCACCCGACAGAATC
CAAACCTCTCATCTTCGCCGGCGACAAAATGGGCCACCTAGGCATTCTCG
ACGCCTCGCAAGAGAAGCCCACCTCCATCAAACCCGAGGACGACGAGGAA
TCCGACGACGAAGATCCGGACCCCGTCCTCACCACCGTAAAACCCCACAC
CCGGACAATCAGCAGCATGCACATCCACCCCAGCACACCGACGACCCTGT
ACACAGCCAGCTACGACAGTTCAATCCGCGCCATGGACCTCGAGAAGTCC
ACCAGCGTGGAGAAATACGCTCCGGAATCGACCTCCTCGGACGAGCCCAT
CTCCGGCATTGACATGGCACTCGACGATCCCAACGTGCTGTATTGGACAA
CGCTGGACGGGGCCTTTGGCCGGCACGACATCCGCACCGACCCAACAGCA
GAAACAGTAAACACATGGCAACTCTCCGAGAAGAAAATCGGCGGTTTCTC
ACTATACCCCACGCAACCGCACTATTTCGCAACAGCGAGTCTGGACCGCT
CAATGCGTCTGTGGGATTTGCGTATGCTGCAGAAACCTAAGAGGGGTAAG
AAAGATGAAGGGCCAACCCCAGTAGGAGAACACTACAGCCGGCTCTCCGT
CTCGCACGCAGCATTCAACAGCGCAGGACAAATCGCGACGTCTTCGTACG
ATGACACGCTCAAGATATACGATCTGAAGAAGAAGGGGATTTCGAACTGG
GATGTAGGGCATGCAGTTTCGGAGGATGAGTTGGGGCCTGATACCGTCGT
TAGACATAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4399585..4400993- >CAN33_49140-T1 ID=CAN33_49140-T1|Name=CAN33_49140-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4680bp|location=Sequence derived from alignment at NKJJ01000022.1:4399585..4400993- (Aspergillus niger FDAARGOS_311)
ACATAAGCATTAAATTGACCCCCGAACGAGTCTACACCATGACTTTCCAC
CCGACAGAATCCAAACCTCTCATCTTCGCCGGCGACAAAATGGGCCACCT
AGGCATTCTCGACGCCTCGCAAGAGAAGCCCACCTCCATCAAACCCGAGG
ACGACGAGGAATCCGACGACGAAGATCCGGACCCCGTCCTCACCACCGTA
AAACCCCACACCCGGACAATCAGCAGCATGCACATCCACCCCAGCACACC
GACGACCCTGTACACAGCCAGCTACGACAGTTCAATCCGCGCCATGGACC
TCGAGAAGTCCACCAGCGTGGAGAAATACGCTCCGGAATCGACCTCCTCG
GACGAGCCCATCTCCGGCATTGACATGGCACTCGACGATCCCAACGTGCT
GTATTGGACAACGCTGGACGGGGCCTTTGGCCGGCACGACATCCGCACCG
ACCCAACAGCAGAAACAGTAAACACATGGCAACTCTCCGAGAAGAAAATC
GGCGGTTTCTCACTATACCCCACGCAACCGCACTATTTCGCAACAGCGAG
TCTGGACCGCTCAATGCGTCTGTGGGATTTGCGTATGCTGCAGAAACCTA
AGAGGGGTAAGAAAGATGAAGGGCCAACCCCAGTAGGAGAACACTACAGC
CGGCTCTCCGTCTCGCACGCAGCATTCAACAGCGCAGGACAAATCGCGAC
GTCTTCGTACGATGACACGCTCAAGATATACGATCTGAAGAAGAAGGGGA
TTTCGAACTGGGATTGATATTATGGTGAACGGGCAGAAGTTGCCTGCGGA
TGGATTGATCGGAGTAGATGTAGTTACCAAGGGCGTGGCGATACCGTACC
AGAGGACGTTTGGCGATGATGAGATCCAGAAGACGACGGATAAGGATCTG
AAGGCGCTGAGGAAGGAGATGAATGGATTGACGCTCTGGGAGGCGTGGGA
ACCTAACCATGGGCAACGACGAAATCTCCGATTTCGAAAAGCAGCGCCTA
GCCAACATCGCCGAACGCGATGCGCTACTCAAAAAGCTGACCATGGAGGC
GCAGTCCTCTGGGCTTTTTCCGCCGAAGATGCCCAAACCAGCAGCGAAGG
ATCAATCGCGGACGAAAAAGAAGACTCCTGTGAAGAAAGTCAAGGAGGAG
ACGCCGCAGCCGCGGCGCATACATAAGCATTAAATTGACCCCCGAACGAG
TCTACACCATGACTTTCCACCCGACAGAATCCAAACCTCTCATCTTCGCC
GGCGACAAAATGGGCCACCTAGGCATTCTCGACGCCTCGCAAGAGAAGCC
CACCTCCATCAAACCCGAGGACGACGAGGAATCCGACGACGAAGATCCGG
ACCCCGTCCTCACCACCGTAAAACCCCACACCCGGACAATCAGCAGCATG
CACATCCACCCCAGCACACCGACGACCCTGTACACAGCCAGCTACGACAG
TTCAATCCGCGCCATGGACCTCGAGAAGTCCACCAGCGTGGAGAAATACG
CTCCGGAATCGACCTCCTCGGACGAGCCCATCTCCGGCATTGACATGGCA
CTCGACGATCCCAACGTGCTGTATTGGACAACGCTGGACGGGGCCTTTGG
CCGGCACGACATCCGCACCGACCCAACAGCAGAAACAGTAAACACATGGC
AACTCTCCGAGAAGAAAATCGGCGGTTTCTCACTATACCCCACGCAACCG
CACTATTTCGCAACAGCGAGTCTGGACCGCTCAATGCGTCTGTGGGATTT
GCGTATGCTGCAGAAACCTAAGAGGGGTAAGAAAGATGAAGGGCCAACCC
CAGTAGGAGAACACTACAGCCGGCTCTCCGTCTCGCACGCAGCATTCAAC
AGCGCAGGACAAATCGCGACGTCTTCGTACGATGACACGCTCAAGATATA
CGATCTGAAGAAGAAGGGGATTTCGAACTGGGATTGATATTATGGTGAAC
GGGCAGAAGTTGCCTGCGGATGGATTGATCGGAGTAGATGTAGTTACCAA
GGGCGTGGCGATACCGTACCAGAGGACGTTTGGCGATGATGAGATCCAGA
AGACGACGGATAAGGATCTGAAGGCGCTGAGGAAGGAGATGAATGGATTG
ACGCTCTGGGAGGCGTGGGAACCTAACCATGGGCAACGACGAAATCTCCG
ATTTCGAAAAGCAGCGCCTAGCCAACATCGCCGAACGCGATGCGCTACTC
AAAAAGCTGACCATGGAGGCGCAGTCCTCTGGGCTTTTTCCGCCGAAGAT
GCCCAAACCAGCAGCGAAGGATCAATCGCGGACGAAAAAGAAGACTCCTG
TGAAGAAAGTCAAGGAGGAGACGCCGCAGCCGCGGCGCATACATAAGCAT
TAAATTGACCCCCGAACGAGTCTACACCATGACTTTCCACCCGACAGAAT
CCAAACCTCTCATCTTCGCCGGCGACAAAATGGGCCACCTAGGCATTCTC
GACGCCTCGCAAGAGAAGCCCACCTCCATCAAACCCGAGGACGACGAGGA
ATCCGACGACGAAGATCCGGACCCCGTCCTCACCACCGTAAAACCCCACA
CCCGGACAATCAGCAGCATGCACATCCACCCCAGCACACCGACGACCCTG
TACACAGCCAGCTACGACAGTTCAATCCGCGCCATGGACCTCGAGAAGTC
CACCAGCGTGGAGAAATACGCTCCGGAATCGACCTCCTCGGACGAGCCCA
TCTCCGGCATTGACATGGCACTCGACGATCCCAACGTGCTGTATTGGACA
ACGCTGGACGGGGCCTTTGGCCGGCACGACATCCGCACCGACCCAACAGC
AGAAACAGTAAACACATGGCAACTCTCCGAGAAGAAAATCGGCGGTTTCT
CACTATACCCCACGCAACCGCACTATTTCGCAACAGCGAGTCTGGACCGC
TCAATGCGTCTGTGGGATTTGCGTATGCTGCAGAAACCTAAGAGGGGTAA
GAAAGATGAAGGGCCAACCCCAGTAGGAGAACACTACAGCCGGCTCTCCG
TCTCGCACGCAGCATTCAACAGCGCAGGACAAATCGCGACGTCTTCGTAC
GATGACACGCTCAAGATATACGATCTGAAGAAGAAGGGGATTTCGAACTG
GGATTGATATTATGGTGAACGGGCAGAAGTTGCCTGCGGATGGATTGATC
GGAGTAGATGTAGTTACCAAGGGCGTGGCGATACCGTACCAGAGGACGTT
TGGCGATGATGAGATCCAGAAGACGACGGATAAGGATCTGAAGGCGCTGA
GGAAGGAGATGAATGGATTGACGCTCTGGGAGGCGTGGGAACCTAACCAT
GGGCAACGACGAAATCTCCGATTTCGAAAAGCAGCGCCTAGCCAACATCG
CCGAACGCGATGCGCTACTCAAAAAGCTGACCATGGAGGCGCAGTCCTCT
GGGCTTTTTCCGCCGAAGATGCCCAAACCAGCAGCGAAGGATCAATCGCG
GACGAAAAAGAAGACTCCTGTGAAGAAAGTCAAGGAGGAGACGCCGCAGC
CGCGGCGCATACATAAGCATTAAATTGACCCCCGAACGAGTCTACACCAT
GACTTTCCACCCGACAGAATCCAAACCTCTCATCTTCGCCGGCGACAAAA
TGGGCCACCTAGGCATTCTCGACGCCTCGCAAGAGAAGCCCACCTCCATC
AAACCCGAGGACGACGAGGAATCCGACGACGAAGATCCGGACCCCGTCCT
CACCACCGTAAAACCCCACACCCGGACAATCAGCAGCATGCACATCCACC
CCAGCACACCGACGACCCTGTACACAGCCAGCTACGACAGTTCAATCCGC
GCCATGGACCTCGAGAAGTCCACCAGCGTGGAGAAATACGCTCCGGAATC
GACCTCCTCGGACGAGCCCATCTCCGGCATTGACATGGCACTCGACGATC
CCAACGTGCTGTATTGGACAACGCTGGACGGGGCCTTTGGCCGGCACGAC
ATCCGCACCGACCCAACAGCAGAAACAGTAAACACATGGCAACTCTCCGA
GAAGAAAATCGGCGGTTTCTCACTATACCCCACGCAACCGCACTATTTCG
CAACAGCGAGTCTGGACCGCTCAATGCGTCTGTGGGATTTGCGTATGCTG
CAGAAACCTAAGAGGGGTAAGAAAGATGAAGGGCCAACCCCAGTAGGAGA
ACACTACAGCCGGCTCTCCGTCTCGCACGCAGCATTCAACAGCGCAGGAC
AAATCGCGACGTCTTCGTACGATGACACGCTCAAGATATACGATCTGAAG
AAGAAGGGGATTTCGAACTGGGATTGATATTATGGTGAACGGGCAGAAGT
TGCCTGCGGATGGATTGATCGGAGTAGATGTAGTTACCAAGGGCGTGGCG
ATACCGTACCAGAGGACGTTTGGCGATGATGAGATCCAGAAGACGACGGA
TAAGGATCTGAAGGCGCTGAGGAAGGAGATGAATGGATTGACGCTCTGGG
AGGCGTGGGAACCTAACCATGGGCAACGACGAAATCTCCGATTTCGAAAA
GCAGCGCCTAGCCAACATCGCCGAACGCGATGCGCTACTCAAAAAGCTGA
CCATGGAGGCGCAGTCCTCTGGGCTTTTTCCGCCGAAGATGCCCAAACCA
GCAGCGAAGGATCAATCGCGGACGAAAAAGAAGACTCCTGTGAAGAAAGT
CAAGGAGGAGACGCCGCAGCCGCGGCGCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| Product | WD domain G-beta repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4399585..4400993 - |
|
