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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4478104..4479270- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_49230-T1 ID=CAN33_49230-T1|Name=CAN33_49230-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1167bp|location=Sequence derived from alignment at NKJJ01000022.1:4478104..4479270- (Aspergillus niger FDAARGOS_311)
ATGGCGGCAGCCGTATCCCAGTCAGAGCCTTCTGGCTCGCAGAATATCTC
GGCTCTGCTCGAGACCCTCACCACGTGTCTCAACAGCACCGGATCATCGC
TCCCCAAGACGAAGCGGGATGCGCCATCAGATGTGTCGATCGAACCGCCG
CAAGATGGCATTTCGCTACTTGACACCAAGTCAGATCTCCTCCTTTCCTA
CATGCAGAACCTCGTATTCTTGGTCATATTCCAGTTGAGGGGTCTCAAGT
CATCCGCGGACAAGGACGCCGAAACGAACGACTCGCTTCCGGACGATATC
GTAAAGAAACTCGTTGAACTACGTGTCTACTTGGATCGCGGTGTCCGGCC
TTTGGAAGGACGGCTGAAATACCAGGTCGACAAGGTTATCAAGGCTGCAG
AGGATGCGGAGCGGGCTGAGCGCGGGGCCGCAGCCCCCAAGAAGAGCAAG
AAGGCTAAGAAGTCCGCTCGCGACGAGGAATCTGGCTCCGACGAAGGTAG
CAGCGACAGCGAGGGAGACAGTGAGGAGGACGATGAGGATGAGGATGAGG
AGGAGGATATAGATGAGATGGCATTCCGGCCTAACGTGTCTGCCTTTTCC
AAGAAGGTCGAGCCTGAGGCCAAGCAGGATAAGGCGACCGCGAGAGCGAC
AAGCGACGGCATCTACCGACCACCTCGCATCATGCCCACAGCCCTACCGA
CTACCGAAACCCGGGAGCGCAGGGAGCGCCCGCAACGCAGGTCCAATGTC
ATTGATGAATTCGTTAGCGCCGAGATGTCATCCGCACCTATGGCCGAGCC
CAGTATCGGGAGTACGATCGTACGTGGTGGACGACAGACGAAGTCCAAGA
AGGATCGCGAGCGTGAGGCTGAGCGGACGAGATATGAAGAAACCAACTTC
GTGCGTCTGGCGAAGGAGAGCAAGAAGGATCGGGCCAAACGTCTGCGTGC
TGAGGGTCCGCGAGGCACCTTTGGCGGGGAGGAATGGCGTGGTCTTACTG
AGGGAGCAGACCGGATCACAAAGCTCACCCGGAGAGCCCAAGGAAGCGGC
TCAGCGCTGGATCGGAGTCGGAAGCGCAAAAATGAAGACGGACAGCGCGA
TGATGGGATGGGAGTGGGACAGATTTTCGAGAAGCGTCGCAAGAAGGTGG
ACAGCTGGAAGCGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4478104..4479270- >CAN33_49230-T1 ID=CAN33_49230-T1|Name=CAN33_49230-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1944bp|location=Sequence derived from alignment at NKJJ01000022.1:4478104..4479270- (Aspergillus niger FDAARGOS_311)
CCCTACCGACTACCGAAACCCGGGAGCGCAGGGAGCGCCCGCAACGCAGG
TCCAATGTCATTGATGAATTCGTTAGCGCCGAGATGTCATCCGCACCTAT
GGCCGAGCCCAGTATCGGGAGTACGATCGTACGTGGTGGACGACAGACGA
AGTCCAAGAAGGATCGCGAGCGTGAGGCTGAGCGGACGAGATATGAAGAA
ACCAACTTCGTGCGTCTGGCGAAGGAGAGCAAGAAGGATCGGGCCAAACG
TCTGCGTGCTGAGGGTCCGCGAGGCACCTTTGGCGGGGAGGAATGGCGTG
GTCTTACTGAGGGAGCAGACCGGATCACAAAGCTCACCCGGAGAGCCCAA
GGAAGCGGCTCAGCGCTGGATCGGAGTCGGAAGCGCAAAAATGAAGACGG
ACAGCGCGATGATGGGATGGGAGTGGGACAGATTTTCGAGAAGCGTCGCA
AGAAGGTGGACAGCTGGAAGCGGTGAATGGCGGCAGCCGTATCCCAGTCA
GAGCCTTCTGGCTCGCAGAATATCTCGGCTCTGCTCGAGACCCTCACCAC
GTGTCTCAACAGCACCGGATCATCGCTCCCCAAGACGAAGCGGGATGCGC
CATCAGATGTGTCGATCGAACCGCCGCAAGATGGCATTTCGCTACTTGAC
ACCAAGTCAGATCTCCTCCTTTCCTACATGCAGAACCTCGTATTCTTGGT
CATATTCCAGTTGAGGGGTCTCAAGTCATCCGCGGACAAGGACGCCGAAA
CGAACGACTCGCTTCCGGACGATATCGTAAAGAAACTCGTTGAACTACGT
GTCTACTTGGATCGCGGTGTCCGGCCTTTGGAAGGACGGCTGAAATACCA
GGTCGACAAGGTTATCAAGGCTGCAGAGGATGCGGAGCGGGCTGAGCGCG
GGGCCGCAGCCCCCAAGAAGAGCAAGAAGGCTAAGAAGTCCGCTCGCGAC
GAGGAATCTGGCTCCGACGAAGCCCTACCGACTACCGAAACCCGGGAGCG
CAGGGAGCGCCCGCAACGCAGGTCCAATGTCATTGATGAATTCGTTAGCG
CCGAGATGTCATCCGCACCTATGGCCGAGCCCAGTATCGGGAGTACGATC
GTACGTGGTGGACGACAGACGAAGTCCAAGAAGGATCGCGAGCGTGAGGC
TGAGCGGACGAGATATGAAGAAACCAACTTCGTGCGTCTGGCGAAGGAGA
GCAAGAAGGATCGGGCCAAACGTCTGCGTGCTGAGGGTCCGCGAGGCACC
TTTGGCGGGGAGGAATGGCGTGGTCTTACTGAGGGAGCAGACCGGATCAC
AAAGCTCACCCGGAGAGCCCAAGGAAGCGGCTCAGCGCTGGATCGGAGTC
GGAAGCGCAAAAATGAAGACGGACAGCGCGATGATGGGATGGGAGTGGGA
CAGATTTTCGAGAAGCGTCGCAAGAAGGTGGACAGCTGGAAGCGGTGAAT
GGCGGCAGCCGTATCCCAGTCAGAGCCTTCTGGCTCGCAGAATATCTCGG
CTCTGCTCGAGACCCTCACCACGTGTCTCAACAGCACCGGATCATCGCTC
CCCAAGACGAAGCGGGATGCGCCATCAGATGTGTCGATCGAACCGCCGCA
AGATGGCATTTCGCTACTTGACACCAAGTCAGATCTCCTCCTTTCCTACA
TGCAGAACCTCGTATTCTTGGTCATATTCCAGTTGAGGGGTCTCAAGTCA
TCCGCGGACAAGGACGCCGAAACGAACGACTCGCTTCCGGACGATATCGT
AAAGAAACTCGTTGAACTACGTGTCTACTTGGATCGCGGTGTCCGGCCTT
TGGAAGGACGGCTGAAATACCAGGTCGACAAGGTTATCAAGGCTGCAGAG
GATGCGGAGCGGGCTGAGCGCGGGGCCGCAGCCCCCAAGAAGAGCAAGAA
GGCTAAGAAGTCCGCTCGCGACGAGGAATCTGGCTCCGACGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000221.11 |
| Note | BUSCO:EOG09263C4C |
| DBxref | InterPro:IPR007146 |
| DBxref | PFAM:PF04000 |
| Product | Sas10/Utp3/C1D family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4478104..4479270 - |
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