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CAN33_49305-T1, CAN33_49305-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_49305-T1
Unique NameCAN33_49305-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4514795..4515820+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_49305-T1 ID=CAN33_49305-T1|Name=CAN33_49305-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1026bp|location=Sequence derived from alignment at NKJJ01000022.1:4514795..4515820+ (Aspergillus niger FDAARGOS_311)
ATGAGCCTCACTTGCACGCACGTCACACCGGAATGTCCCGTCACGGCGAC
AACATATGGCTACTACCCCAACCTAGGCGGTAATATCTTTTTCGCCGTCT
ACTTTGGCCTACTCGGCACCCTCCAACTTGGTCTCGGCGTCTACTACCGC
TCCTGGACCATGTTGATAGCGATGGTAATCGGCGGGTACATGGAACTAGC
GGGATACATCGGCCGAATCTTAATGAACCATAATCCCTGGGACCAAGGCG
GCTTCAAACTGCAAATTGTCTGTCTCGTGCTCGCCCCGACCTTCATCGCC
GCCGGTATCTATCTCACCCTGAAGCACGTCATCCTCTCCTTGGGCCCGGA
ACACTCGCGTCTCAAGCCCCGGCTCTTTACCTGGATCTTTATCAGCTGTG
ATGTCGGATCGCTCATTCTCCAGGCCGCAGGTGGTGGTGTTGCCGCTGCA
GCGGGCAGCGAGAATCAGAATTTGCTGAAGGTGGGCGATGATATCATGGT
GGCGGGTATCGCCTTCCAGGTGGGCACGATGTCAGTTTGTGGTCTGTTGG
CGCTGGATTTCTTTATCCGCGTTGTGAGAAAGGGACCTGGTTTGGGCGGC
GAGAAGTATATTGATGAGAATGGGAATCTCACTGGGCCGAAGCACCTCAG
GGTTGTTGTTTGGGCGGGCATCGTGGCTTACTTTGCTACTTTGATCCGGT
GTATTTATCGGTAAGTCCCTCTCTACTTCCACGCTCTCAAGCTATGGACG
ATACGATGTACTAACATAGTTTACCGTGGGTAGTATTCCCGAAATGGCCG
GTGGATGGGGTAACCCGCTCATGCAGAAAGAGAATGAATTTTTGGTTTTG
GATGGAATGTGAGCATTCCTTTTGATCATGTTTTCCGTTCTATGTTGTGA
ATCCAGACGTACTGATTGGAGTTATTTAGGATGATGGCCATCGCCGTGAG
CTGCCTTACCTACCTCTACCCTGGATTCTTCCTGCAATCTATCCGGAAGG
GTATGAAGAAGACTCCGAAAGCCTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4514795..4515820+

>CAN33_49305-T1 ID=CAN33_49305-T1|Name=CAN33_49305-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2646bp|location=Sequence derived from alignment at NKJJ01000022.1:4514795..4515820+ (Aspergillus niger FDAARGOS_311)
ATGAGCCTCACTTGCACGCACGTCACACCGGAATGTCCCGTCACGGCGAC
AACATATGGCTACTACCCCAACCTAGGCGGTAATATCTTTTTCGCCGTCT
ACTTTGGCCTACTCGGCACCCTCCAACTTGGTCTCGGCGTCTACTACCGC
TCCTGGACCATGTTGATAGCGATGGTAATCGGCGGGTACATGGAACTAGC
GGGATACATCGGCCGAATCTTAATGAACCATAATCCCTGGGACCAAGGCG
GCTTCAAACTGCAAATTGTCTGTCTCGTGCTCGCCCCGACCTTCATCGCC
GCCGGTATCTATCTCACCCTGAAGCACGTCATCCTCTCCTTGGGCCCGGA
ACACTCGCGTCTCAAGCCCCGGCTCTTTACCTGGATCTTTATCAGCTGTG
ATGTCGGATCGCTCATTCTCCAGGCCGCAGGTGGTGGTGTTGCCGCTGCA
GCGGGCAGCGAGAATCAGAATTTGCTGAAGGTGGGCGATGATATCATGGT
GGCGGGTATCGCCTTCCAGGTGGGCACGATGTCAGTTTGTGGTCTGTTGG
CGCTGGATTTCTTTATCCGCGTTGTGAGAAAGGGACCTGGTTTGGGCGGC
GAGAAGTATATTGATGAGAATGGGAATCTCACTGGGCCGAAGCACCTCAG
GGTTGTTGTTTGGGCGGGCATCGTGGCTTACTTTGCTACTTTGATCCGGT
GTATTTATCGTATTCCCGAAATGGCCGGTGGATGGGGTAACCCGCTCATG
CAGAAAGAGAATGAATTTTTGGTTTTGGATGGAATGATGATGGCCATCGC
CGTGAGCTGCCTTACCTACCTCTACCCTGGATTCTTCCTGCAATCTATCC
GGAAGGGTATGAAGAAGACTCCGAAAGCCTAGATGAGCCTCACTTGCACG
CACGTCACACCGGAATGTCCCGTCACGGCGACAACATATGGCTACTACCC
CAACCTAGGCGGTAATATCTTTTTCGCCGTCTACTTTGGCCTACTCGGCA
CCCTCCAACTTGGTCTCGGCGTCTACTACCGCTCCTGGACCATGTTGATA
GCGATGGTAATCGGCGGGTACATGGAACTAGCGGGATACATCGGCCGAAT
CTTAATGAACCATAATCCCTGGGACCAAGGCGGCTTCAAACTGCAAATTG
TCTGTCTCGTGCTCGCCCCGACCTTCATCGCCGCCGGTATCTATCTCACC
CTGAAGCACGTCATCCTCTCCTTGGGCCCGGAACACTCGCGTCTCAAGCC
CCGGCTCTTTACCTGGATCTTTATCAGCTGTGATGTCGGATCGCTCATTC
TCCAGGCCGCAGGTGGTGGTGTTGCCGCTGCAGCGGGCAGCGAGAATCAG
AATTTGCTGAAGGTGGGCGATGATATCATGGTGGCGGGTATCGCCTTCCA
GGTGGGCACGATGTCAGTTTGTGGTCTGTTGGCGCTGGATTTCTTTATCC
GCGTTGTGAGAAAGGGACCTGGTTTGGGCGGCGAGAAGTATATTGATGAG
AATGGGAATCTCACTGGGCCGAAGCACCTCAGGGTTGTTGTTTGGGCGGG
CATCGTGGCTTACTTTGCTACTTTGATCCGGTGTATTTATCGTATTCCCG
AAATGGCCGGTGGATGGGGTAACCCGCTCATGCAGAAAGAGAATGAATTT
TTGGTTTTGGATGGAATGATGATGGCCATCGCCGTGAGCTGCCTTACCTA
CCTCTACCCTGGATTCTTCCTGCAATCTATCCGGAAGGGTATGAAGAAGA
CTCCGAAAGCCTAGATGAGCCTCACTTGCACGCACGTCACACCGGAATGT
CCCGTCACGGCGACAACATATGGCTACTACCCCAACCTAGGCGGTAATAT
CTTTTTCGCCGTCTACTTTGGCCTACTCGGCACCCTCCAACTTGGTCTCG
GCGTCTACTACCGCTCCTGGACCATGTTGATAGCGATGGTAATCGGCGGG
TACATGGAACTAGCGGGATACATCGGCCGAATCTTAATGAACCATAATCC
CTGGGACCAAGGCGGCTTCAAACTGCAAATTGTCTGTCTCGTGCTCGCCC
CGACCTTCATCGCCGCCGGTATCTATCTCACCCTGAAGCACGTCATCCTC
TCCTTGGGCCCGGAACACTCGCGTCTCAAGCCCCGGCTCTTTACCTGGAT
CTTTATCAGCTGTGATGTCGGATCGCTCATTCTCCAGGCCGCAGGTGGTG
GTGTTGCCGCTGCAGCGGGCAGCGAGAATCAGAATTTGCTGAAGGTGGGC
GATGATATCATGGTGGCGGGTATCGCCTTCCAGGTGGGCACGATGTCAGT
TTGTGGTCTGTTGGCGCTGGATTTCTTTATCCGCGTTGTGAGAAAGGGAC
CTGGTTTGGGCGGCGAGAAGTATATTGATGAGAATGGGAATCTCACTGGG
CCGAAGCACCTCAGGGTTGTTGTTTGGGCGGGCATCGTGGCTTACTTTGC
TACTTTGATCCGGTGTATTTATCGTATTCCCGAAATGGCCGGTGGATGGG
GTAACCCGCTCATGCAGAAAGAGAATGAATTTTTGGTTTTGGATGGAATG
ATGATGGCCATCGCCGTGAGCTGCCTTACCTACCTCTACCCTGGATTCTT
CCTGCAATCTATCCGGAAGGGTATGAAGAAGACTCCGAAAGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_49305CAN33_49305Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49305-T1.exon1CAN33_49305-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_49305-T1.exon2CAN33_49305-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_49305-T1.exon3CAN33_49305-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49305-T1.cdsCAN33_49305-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49305-T1CAN33_49305-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
ProductRTA1 like protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4514795..4515820 +
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