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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4521847..4522757+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_49320-T1 ID=CAN33_49320-T1|Name=CAN33_49320-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=911bp|location=Sequence derived from alignment at NKJJ01000022.1:4521847..4522757+ (Aspergillus niger FDAARGOS_311)
ATGTCGAGTAACTACAAGCTCTATGAATATGACCCCTCTGTCGGCGCTGC
TATTGTCTCTGCCGGACTGTTCGCCGCAACCTCCATGGTGCATCTTTTCC
AGATGATCCGCAGGCGGACATGGTGCTTTGTACCATTTGTTCTTGGTGGA
TTCTGTGTGTTCCCTCATCCCCTCAAGTATTCATCACCTTGCTAATGCCT
TAATTCCTTCCAGTTGAAACATTCGGATACATCGCCCGTTACTTCAGCGC
CAGAGAGACCCCAGATTGGACCGTGAAGCCCTACGTCGGACAAGAACTGC
TGCTTCTTCTAGCTCCGGCTCTCTTCTCCGCCTCCATCTACATGATCCTG
GGCCGAATCATCCGCCTCCTCGACGGCCACACATACTCGCTAATCCGGCC
ATCATGGCTGACCAAGATATTCGTAACCGGCGATGTGCTCTCATTCTTCA
TCCAAAGTGGCGGCGGCGGCATAATGGCATCTGCGAAGACCCCCAGCAAG
GTCTCCTTGGGCAATAACATCATCGTGGTCGGTCTTATCGTTCAGTTGGT
CTTTTTCGGCTTCTTCATCATTGTCACTGTGGTCTTTCATCGCCGTATGG
CTGCTTCGCCGACTGAAGTGTCCGTGATAATCACACAGTGGCACACCTAT
ATGCGCATCTTGTATGCGGCTAGTGTTCTCATCATGGTGCGGTCCGTCTA
TCGTGTGCTGGAGTATCTGCAGGGTTCGGAGGGAGGTTTGAAACAAAATG
AGATGTTCCTTTATATTTTTGATGCTCTGTTAATGTTTTCGTGTTGTGTT
TTGTTCAATGTCATGCACCCGAATCGTATACTCTCAGCTCGTCCGGAGGC
TTACGACAAGATGATGGAAGTGGAGGAGGATCAGGTGGAGATGCTGCGAC
GAAGACGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4521847..4522757+ >CAN33_49320-T1 ID=CAN33_49320-T1|Name=CAN33_49320-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1704bp|location=Sequence derived from alignment at NKJJ01000022.1:4521847..4522757+ (Aspergillus niger FDAARGOS_311)
ATGTCGAGTAACTACAAGCTCTATGAATATGACCCCTCTGTCGGCGCTGC
TATTGTCTCTGCCGGACTGTTCGCCGCAACCTCCATGGTGCATCTTTTCC
AGATGATCCGCAGGCGGACATGGTGCTTTGTACCATTTGTTCTTGGTGGA
TTCTTTGAAACATTCGGATACATCGCCCGTTACTTCAGCGCCAGAGAGAC
CCCAGATTGGACCGTGAAGCCCTACGTCGGACAAGAACTGCTGCTTCTTC
TAGCTCCGGCTCTCTTCTCCGCCTCCATCTACATGATCCTGGGCCGAATC
ATCCGCCTCCTCGACGGCCACACATACTCGCTAATCCGGCCATCATGGCT
GACCAAGATATTCGTAACCGGCGATGTGCTCTCATTCTTCATCCAAAGTG
GCGGCGGCGGCATAATGGCATCTGCGAAGACCCCCAGCAAGGTCTCCTTG
GGCAATAACATCATCGTGGTCGGTCTTATCGTTCAGTTGGTCTTTTTCGG
CTTCTTCATCATTGTCACTGTGGTCTTTCATCGCCGTATGGCTGCTTCGC
CGACTGAAGTGTCCGTGATAATCACACAGTGGCACACCTATATGCGCATC
TTGTATGCGGCTAGTGTTCTCATCATGGTGCGGTCCGTCTATCGTGTGCT
GGAGTATCTGCAGGGTTCGGAGGGAGGTTTGAAACAAAATGAGATGTTCC
TTTATATTTTTGATGCTCTGTTAATGTTTTCGTGTTGTGTTTTGTTCAAT
GTCATGCACCCGAATCGTATACTCTCAGCTCGTCCGGAGGCTTACGACAA
GATGATGGAAGTGGAGGAGGATCAGGTGGAGATGCTGCGACGAAGACGTT
GAATGTCGAGTAACTACAAGCTCTATGAATATGACCCCTCTGTCGGCGCT
GCTATTGTCTCTGCCGGACTGTTCGCCGCAACCTCCATGGTGCATCTTTT
CCAGATGATCCGCAGGCGGACATGGTGCTTTGTACCATTTGTTCTTGGTG
GATTCTTTGAAACATTCGGATACATCGCCCGTTACTTCAGCGCCAGAGAG
ACCCCAGATTGGACCGTGAAGCCCTACGTCGGACAAGAACTGCTGCTTCT
TCTAGCTCCGGCTCTCTTCTCCGCCTCCATCTACATGATCCTGGGCCGAA
TCATCCGCCTCCTCGACGGCCACACATACTCGCTAATCCGGCCATCATGG
CTGACCAAGATATTCGTAACCGGCGATGTGCTCTCATTCTTCATCCAAAG
TGGCGGCGGCGGCATAATGGCATCTGCGAAGACCCCCAGCAAGGTCTCCT
TGGGCAATAACATCATCGTGGTCGGTCTTATCGTTCAGTTGGTCTTTTTC
GGCTTCTTCATCATTGTCACTGTGGTCTTTCATCGCCGTATGGCTGCTTC
GCCGACTGAAGTGTCCGTGATAATCACACAGTGGCACACCTATATGCGCA
TCTTGTATGCGGCTAGTGTTCTCATCATGGTGCGGTCCGTCTATCGTGTG
CTGGAGTATCTGCAGGGTTCGGAGGGAGGTTTGAAACAAAATGAGATGTT
CCTTTATATTTTTGATGCTCTGTTAATGTTTTCGTGTTGTGTTTTGTTCA
ATGTCATGCACCCGAATCGTATACTCTCAGCTCGTCCGGAGGCTTACGAC
AAGATGATGGAAGTGGAGGAGGATCAGGTGGAGATGCTGCGACGAAGACG
TTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | RTA1 like protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4521847..4522757 + |
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