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CAN33_4950-T1, CAN33_4950-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4950-T1
Unique NameCAN33_4950-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:725515..727413-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4950-T1 ID=CAN33_4950-T1|Name=CAN33_4950-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1899bp|location=Sequence derived from alignment at NKJJ01000019.1:725515..727413- (Aspergillus niger FDAARGOS_311)
ATGTCCTCACTTTCAGGCGCGCGCTTTAGCCCGCCGCAGTCAGCGCAACC
ATACAGGTCCATTTTCGGAGGTCCGAGTAGCCAAGATGTTGCCGATCTGG
TACCCTACCCAGAAACCCAAACTGGGGCCGGAGATAGCCAGGAAGACCTT
GACGTGATCATGGAAGAGGAGCCGATTGAGAACGATCACTCGGACGCTAC
TTACGTTGAGAGCAATGACGATGAGCAATCTGGTTCAGATGCGGACAGCT
ATGCATCTGTTCCTCAGTCACCTAAAAAGCAGCAGCAGCAGCAGCAGATG
CTCCAAAAAGTGACTGAGCGTGACCGCCAGCGTGATTCAGAGACCCGTTC
GGCACATTCGTACCGTCCTAACAGATTCCGCGGGCCTGAATCTACGTGGA
GAAGATTGACTGCCGAAGATAGACAGAATGCTCAAGCTCTGGAAGATGTT
CGAGCCCGAGATCTAGCTGCACATTTGTACAATGCTTATGCGCTCCGAGT
CCGGGCGCGAGAGATAGCGAGACGAGCGACGGAGACAAATGAGCAACTGC
TGGATGAGATGGATACATTTGCTCCTCCGAAGCGTTGGACCGCGTGGCCT
CTACCTTCGACTGAGGTGCCTAGACCGGATGAGGAAGTGCGGAAAAGTCT
CGACGATGCTTGGACACTGAGAATGCAGCCAGATCCTCGACCAAGTGCCG
AACTAGAGGAATCTGTCATGGCGTTCATGTTACGGACGGCAAAGGAGAGG
TTCATGGCCAGGGAATGGGATTATCAGTCGAAGCCATTTACATCCCATCG
AAGAAAAAGATCAGCGTCTCAACACGAGACGCAGGATGAAAGTACCGCAT
GGGAAAGCGAGCGCGAAGGTGCGGATGGCGTTCCATTACGCCCAGCTGTC
CAGACAGATGACGATAAATCAAGACGACAACTACGCCCACTCACTCGGAA
CATACTCTCGCAGTTTGACGAGCTTCTCATGGGACTTCATCGTGCCCGGA
AGGGCGGAGTGGCAGCGGATGACAGCTCCGCAAGTGACTGGCAGACCGAT
ACTGAAAGTGTGATCTCTGGCTCATCACCTCGGAAGAGAAAAGTCAATTC
TCAAAGAGCGAGAAGTCAATCGAGAGGAAGAAAACGGACCCGACGGTCAT
CCTTTAAGAGCGGATCGAGTGACGCTCGTTCTCGTAGTACACATGTATCA
AGCGGGCCGGAGTCAAGCGTACACAGCTCCTCTCAAGCAACCTCAAGATA
CAGATCACAGTCACAACATTCTTCCCGCTCACGAGGCCGATCCGTCGGTA
GTGATCGTCGACGGTCCGCCAGTCGTGTTCGCCTCGGGATACGGGATTGG
AGTGAGGTGTTGGGAGTCGCCTCCATGATAGGATGGCCGCCAGCCGTGGT
GATGCGAACAGCACAGAGATGCGCAGCCTTGTTTGGCGAAGATATGACGT
TCCAGGTCCTCAAAGAAGGGAAGGTCAAGCAAGATATAGGAGACGACGAT
ACCAAGATATGGAAATACGAAGAAAGCGAATCAGAACTTGAAGTTCAGAC
TGATCTTGAGCCTGAATCTGAGGCCGAGGCGGAAATTTCACAACCCTCCC
GTTCTCAGAGCAGACGACCACGCTCTCGTGCCGCTTCCACCAAGGGAGGC
TCGACATCGCGAGCCAACAGTACGGCGCCTGAGGACGCCGGGGATGGGTC
CCGACCAAAAGGCAAAGGAGAACATCGCAAGCAGGATTTGGTCTGTCCTA
TCCGGGCGTGTTCCAGGCATAGCAAGGGCTTCTCGCGGACATGGAATCTC
AATCTGCATATGAAGCGCATGCATCCGAATTACCGTTCCAGAAGCGATGG
CAGATCGTCGACTGGCACGCGCGGTGAGAATGACGTTGATAATGAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:725515..727413-

>CAN33_4950-T1 ID=CAN33_4950-T1|Name=CAN33_4950-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3654bp|location=Sequence derived from alignment at NKJJ01000019.1:725515..727413- (Aspergillus niger FDAARGOS_311)
CGTGATTCAGAGACCCGTTCGGCACATTCGTACCGTCCTAACAGATTCCG
CGGGCCTGAATCTACGTGGAGAAGATTGACTGCCGAAGATAGACAGAATG
CTCAAGCTCTGGAAGATGTTCGAGCCCGAGATCTAGCTGCACATTTGTAC
AATGCTTATGCGCTCCGAGTCCGGGCGCGAGAGATAGCGAGACGAGCGAC
GGAGACAAATGAGCAACTGCTGGATGAGATGGATACATTTGCTCCTCCGA
AGCGTTGGACCGCGTGGCCTCTACCTTCGACTGAGGTGCCTAGACCGGAT
GAGGAAGTGCGGAAAAGTCTCGACGATGCTTGGACACTGAGAATGCAGCC
AGATCCTCGACCAAGTGCCGAACTAGAGGAATCTGTCATGGCGTTCATGT
TACGGACGGCAAAGGAGAGGTTCATGGCCAGGGAATGGGATTATCAGTCG
AAGCCATTTACATCCCATCGAAGAAAAAGATCAGCGTCTCAACACGAGAC
GCAGGATGAAAGTACCGCATGGGAAAGCGAGCGCGAAGGTGCGGATGGCG
TTCCATTACGCCCAGCTGTCCAGACAGATGACGATAAATCAAGACGACAA
CTACGCCCACTCACTCGGAACATACTCTCGCAGTTTGACGAGCTTCTCAT
GGGACTTCATCGTGCCCGGAAGGGCGGAGTGGCAGCGGATGACAGCTCCG
CAAGTGACTGGCAGACCGATACTGAAAGTGTGATCTCTGGCTCATCACCT
CGGAAGAGAAAAGTCAATTCTCAAAGAGCGAGAAGTCAATCGAGAGGAAG
AAAACGGACCCGACGGTCATCCTTTAAGAGCGGATCGAGTGACGCTCGTT
CTCGTAGTACACATGTATCAAGCGGGCCGGAGTCAAGCGTACACAGCTCC
TCTCAAGCAACCTCAAGATACAGATCACAGTCACAACATTCTTCCCGCTC
ACGAGGCCGATCCGTCGGTAGTGATCGTCGACGGTCCGCCAGTCGTGTTC
GCCTCGGGATACGGGATTGGAGTGAGGTGTTGGGAGTCGCCTCCATGATA
GGATGGCCGCCAGCCGTGGTGATGCGAACAGCACAGAGATGCGCAGCCTT
GTTTGGCGAAGATATGACGTTCCAGGTCCTCAAAGAAGGGAAGGTCAAGC
AAGATATAGGAGACGACGATACCAAGATATGGAAATACGAAGAAAGCGAA
TCAGAACTTGAAGTTCAGACTGATCTTGAGCCTGAATCTGAGGCCGAGGC
GGAAATTTCACAACCCTCCCGTTCTCAGAGCAGACGACCACGCTCTCGTG
CCGCTTCCACCAAGGGAGGCTCGACATCGCGAGCCAACAGTACGGCGCCT
GAGGACGCCGGGGATGGGTCCCGACCAAAAGGCAAAGGAGAACATCGCAA
GCAGGATTTGGTCTGTCCTATCCGGGCGTGTTCCAGGCATAGCAAGGGCT
TCTCGCGGACATGGAATCTCAATCTGCATATGAAGCGCATGCATCCGAAT
TACCGTTCCAGAAGCGATGGCAGATCGTCGACTGGCACGCGCGGTGAGAA
TGACGTTGATAATGAGTGAATGTCCTCACTTTCAGGCGCGCGCTTTAGCC
CGCCGCAGTCAGCGCAACCATACAGGTCCATTTTCGGAGGTCCGAGTAGC
CAAGATGTTGCCGATCTGGTACCCTACCCAGAAACCCAAACTGGGGCCGG
AGATAGCCAGGAAGACCTTGACGTGATCATGGAAGAGGAGCCGATTGAGA
ACGATCACTCGGACGCTACTTACGTTGAGAGCAATGACGATGAGCAATCT
GGTTCAGATGCGGACAGCTATGCATCTCGTGATTCAGAGACCCGTTCGGC
ACATTCGTACCGTCCTAACAGATTCCGCGGGCCTGAATCTACGTGGAGAA
GATTGACTGCCGAAGATAGACAGAATGCTCAAGCTCTGGAAGATGTTCGA
GCCCGAGATCTAGCTGCACATTTGTACAATGCTTATGCGCTCCGAGTCCG
GGCGCGAGAGATAGCGAGACGAGCGACGGAGACAAATGAGCAACTGCTGG
ATGAGATGGATACATTTGCTCCTCCGAAGCGTTGGACCGCGTGGCCTCTA
CCTTCGACTGAGGTGCCTAGACCGGATGAGGAAGTGCGGAAAAGTCTCGA
CGATGCTTGGACACTGAGAATGCAGCCAGATCCTCGACCAAGTGCCGAAC
TAGAGGAATCTGTCATGGCGTTCATGTTACGGACGGCAAAGGAGAGGTTC
ATGGCCAGGGAATGGGATTATCAGTCGAAGCCATTTACATCCCATCGAAG
AAAAAGATCAGCGTCTCAACACGAGACGCAGGATGAAAGTACCGCATGGG
AAAGCGAGCGCGAAGGTGCGGATGGCGTTCCATTACGCCCAGCTGTCCAG
ACAGATGACGATAAATCAAGACGACAACTACGCCCACTCACTCGGAACAT
ACTCTCGCAGTTTGACGAGCTTCTCATGGGACTTCATCGTGCCCGGAAGG
GCGGAGTGGCAGCGGATGACAGCTCCGCAAGTGACTGGCAGACCGATACT
GAAAGTGTGATCTCTGGCTCATCACCTCGGAAGAGAAAAGTCAATTCTCA
AAGAGCGAGAAGTCAATCGAGAGGAAGAAAACGGACCCGACGGTCATCCT
TTAAGAGCGGATCGAGTGACGCTCGTTCTCGTAGTACACATGTATCAAGC
GGGCCGGAGTCAAGCGTACACAGCTCCTCTCAAGCAACCTCAAGATACAG
ATCACAGTCACAACATTCTTCCCGCTCACGAGGCCGATCCGTCGGTAGTG
ATCGTCGACGGTCCGCCAGTCGTGTTCGCCTCGGGATACGGGATTGGAGT
GAGGTGTTGGGAGTCGCCTCCATGATAGGATGGCCGCCAGCCGTGGTGAT
GCGAACAGCACAGAGATGCGCAGCCTTGTTTGGCGAAGATATGACGTTCC
AGGTCCTCAAAGAAGGGAAGGTCAAGCAAGATATAGGAGACGACGATACC
AAGATATGGAAATACGAAGAAAGCGAATCAGAACTTGAAGTTCAGACTGA
TCTTGAGCCTGAATCTGAGGCCGAGGCGGAAATTTCACAACCCTCCCGTT
CTCAGAGCAGACGACCACGCTCTCGTGCCGCTTCCACCAAGGGAGGCTCG
ACATCGCGAGCCAACAGTACGGCGCCTGAGGACGCCGGGGATGGGTCCCG
ACCAAAAGGCAAAGGAGAACATCGCAAGCAGGATTTGGTCTGTCCTATCC
GGGCGTGTTCCAGGCATAGCAAGGGCTTCTCGCGGACATGGAATCTCAAT
CTGCATATGAAGCGCATGCATCCGAATTACCGTTCCAGAAGCGATGGCAG
ATCGTCGACTGGCACGCGCGGTGAGAATGACGTTGATAATGAGTGAATGT
CCTCACTTTCAGGCGCGCGCTTTAGCCCGCCGCAGTCAGCGCAACCATAC
AGGTCCATTTTCGGAGGTCCGAGTAGCCAAGATGTTGCCGATCTGGTACC
CTACCCAGAAACCCAAACTGGGGCCGGAGATAGCCAGGAAGACCTTGACG
TGATCATGGAAGAGGAGCCGATTGAGAACGATCACTCGGACGCTACTTAC
GTTGAGAGCAATGACGATGAGCAATCTGGTTCAGATGCGGACAGCTATGC
ATCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4950CAN33_4950Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4950-T1CAN33_4950-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4950-T1.cdsCAN33_4950-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4950-T1.exon2CAN33_4950-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4950-T1.exon1CAN33_4950-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019622
DBxrefPFAM:PF10680
ProductRNA polymerase I specific transcription initiation factor family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:725515..727413 -
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