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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:4626939..4628044- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_49510-T1 ID=CAN33_49510-T1|Name=CAN33_49510-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1106bp|location=Sequence derived from alignment at NKJJ01000022.1:4626939..4628044- (Aspergillus niger FDAARGOS_311)
ATGATCGCCCCTACTGAGCCCGTTCTCTCCTCCAATTCGGCCACCCCCAT
CACCCAGTTCCACCCTGAAATCACTCGGGAGGCTTTGGAAGAAAAGGTCA
TTCTCATTGTAGGTACGTATATTCCATTGTGTCTTCTTATCACTCATCCA
TTATCAATGCTAAACCACGTTTGGAACAGGAGGTGCCAATGGTATCGGCG
CTAGTCTTGTCGAGCTTTGCTGTGAAAACAACGCCTACGTATGCATTGGC
GACATTGATTCTACTGCCGGTGCACCCTTGAGCCGGAAGTGTCGCGAGAA
ATGGCCTGTCTACTGGGACCCCTCTGGACCCCCGAAACCTCCGCGCTCCT
CCTTCCAAGAGACCGATATCACGAACTACCAATCTGTGCTGGATCTCTTT
GACTTTACGTTCAAGACCTACAAGCGCATTGACCATGTCGTCGTTACTGC
TGGCAGTATGGAACCAAAGGAGAATTGGTTTGACAATGCTCTAAGCCTTC
AGGCTGTGCGCGAGGTAAGCTACCAACAGCATCTACCTCCTGAGTGATCT
TGCTAACAATGATAAGCCCCCATCCACCAGAGACCTCGACGTCAACCTCA
CTGGGACTCTCTACGTCGTTCGTCTCGCTGGCGCCTACCTCCGCCACAAC
CGTGGCCCGGGAGTGGATCGCTCCATCACACTTTTCTCTTGCGCCGCAGG
GTTCAAGGAGACCCCGGGCGTATCTGTTTACCAGGCTGCCAAGCACGGCG
TGCAAGGCCTGATGCGCTCGCTGTGTCCCTATTTTATCCACCCTTACAAG
CACAACCTTCGCATTAACACGATCTGCCCCTGGATGACCCAGACTCATCC
TGCTGTAACAAAGAAACTGTGCGACCGATGGGAAGAGGAGGGTCTGCCCA
TCAGCTCTCCCCTCCAGGTCGCTCAGGTGGCTGCTGGTGTCCTCGTGGAC
GACTCACTGAACGGCACCTCTATGTACGTCGAGGGTGGCCGCGCCTGGGA
AATCGAGGCGAACCTTGATCGTCTCGAGCCACAATGGCTGGGTGAAGTCC
CTGCGAAGACACTTGCTCAGGGACAGAAGGTGTTGAAAGATGCCTGGGCT
GCATGA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:4626939..4628044- >CAN33_49510-T1 ID=CAN33_49510-T1|Name=CAN33_49510-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2961bp|location=Sequence derived from alignment at NKJJ01000022.1:4626939..4628044- (Aspergillus niger FDAARGOS_311)
CCCCCATCCACCAGAGACCTCGACGTCAACCTCACTGGGACTCTCTACGT
CGTTCGTCTCGCTGGCGCCTACCTCCGCCACAACCGTGGCCCGGGAGTGG
ATCGCTCCATCACACTTTTCTCTTGCGCCGCAGGGTTCAAGGAGACCCCG
GGCGTATCTGTTTACCAGGCTGCCAAGCACGGCGTGCAAGGCCTGATGCG
CTCGCTGTGTCCCTATTTTATCCACCCTTACAAGCACAACCTTCGCATTA
ACACGATCTGCCCCTGGATGACCCAGACTCATCCTGCTGTAACAAAGAAA
CTGTGCGACCGATGGGAAGAGGAGGGTCTGCCCATCAGCTCTCCCCTCCA
GGTCGCTCAGGTGGCTGCTGGTGTCCTCGTGGACGACTCACTGAACGGCA
CCTCTATGTACGTCGAGGGTGGCCGCGCCTGGGAAATCGAGGCGAACCTT
GATCGTCTCGAGCCACAATGGCTGGGTGAAGTCCCTGCGAAGACACTTGC
TCAGGGACAGAAGGTGTTGAAAGATGCCTGGGCTGCATGAGAGGTGCCAA
TGGTATCGGCGCTAGTCTTGTCGAGCTTTGCTGTGAAAACAACGCCTACG
TATGCATTGGCGACATTGATTCTACTGCCGGTGCACCCTTGAGCCGGAAG
TGTCGCGAGAAATGGCCTGTCTACTGGGACCCCTCTGGACCCCCGAAACC
TCCGCGCTCCTCCTTCCAAGAGACCGATATCACGAACTACCAATCTGTGC
TGGATCTCTTTGACTTTACGTTCAAGACCTACAAGCGCATTGACCATGTC
GTCGTTACTGCTGGCAGTATGGAACCAAAGGAGAATTGGTTTGACAATGC
TCTAAGCCTTCAGGCTGTGCGCGAGATGATCGCCCCTACTGAGCCCGTTC
TCTCCTCCAATTCGGCCACCCCCATCACCCAGTTCCACCCTGAAATCACT
CGGGAGGCTTTGGAAGAAAAGGTCATTCTCATTGTAGCCCCCATCCACCA
GAGACCTCGACGTCAACCTCACTGGGACTCTCTACGTCGTTCGTCTCGCT
GGCGCCTACCTCCGCCACAACCGTGGCCCGGGAGTGGATCGCTCCATCAC
ACTTTTCTCTTGCGCCGCAGGGTTCAAGGAGACCCCGGGCGTATCTGTTT
ACCAGGCTGCCAAGCACGGCGTGCAAGGCCTGATGCGCTCGCTGTGTCCC
TATTTTATCCACCCTTACAAGCACAACCTTCGCATTAACACGATCTGCCC
CTGGATGACCCAGACTCATCCTGCTGTAACAAAGAAACTGTGCGACCGAT
GGGAAGAGGAGGGTCTGCCCATCAGCTCTCCCCTCCAGGTCGCTCAGGTG
GCTGCTGGTGTCCTCGTGGACGACTCACTGAACGGCACCTCTATGTACGT
CGAGGGTGGCCGCGCCTGGGAAATCGAGGCGAACCTTGATCGTCTCGAGC
CACAATGGCTGGGTGAAGTCCCTGCGAAGACACTTGCTCAGGGACAGAAG
GTGTTGAAAGATGCCTGGGCTGCATGAGAGGTGCCAATGGTATCGGCGCT
AGTCTTGTCGAGCTTTGCTGTGAAAACAACGCCTACGTATGCATTGGCGA
CATTGATTCTACTGCCGGTGCACCCTTGAGCCGGAAGTGTCGCGAGAAAT
GGCCTGTCTACTGGGACCCCTCTGGACCCCCGAAACCTCCGCGCTCCTCC
TTCCAAGAGACCGATATCACGAACTACCAATCTGTGCTGGATCTCTTTGA
CTTTACGTTCAAGACCTACAAGCGCATTGACCATGTCGTCGTTACTGCTG
GCAGTATGGAACCAAAGGAGAATTGGTTTGACAATGCTCTAAGCCTTCAG
GCTGTGCGCGAGATGATCGCCCCTACTGAGCCCGTTCTCTCCTCCAATTC
GGCCACCCCCATCACCCAGTTCCACCCTGAAATCACTCGGGAGGCTTTGG
AAGAAAAGGTCATTCTCATTGTAGCCCCCATCCACCAGAGACCTCGACGT
CAACCTCACTGGGACTCTCTACGTCGTTCGTCTCGCTGGCGCCTACCTCC
GCCACAACCGTGGCCCGGGAGTGGATCGCTCCATCACACTTTTCTCTTGC
GCCGCAGGGTTCAAGGAGACCCCGGGCGTATCTGTTTACCAGGCTGCCAA
GCACGGCGTGCAAGGCCTGATGCGCTCGCTGTGTCCCTATTTTATCCACC
CTTACAAGCACAACCTTCGCATTAACACGATCTGCCCCTGGATGACCCAG
ACTCATCCTGCTGTAACAAAGAAACTGTGCGACCGATGGGAAGAGGAGGG
TCTGCCCATCAGCTCTCCCCTCCAGGTCGCTCAGGTGGCTGCTGGTGTCC
TCGTGGACGACTCACTGAACGGCACCTCTATGTACGTCGAGGGTGGCCGC
GCCTGGGAAATCGAGGCGAACCTTGATCGTCTCGAGCCACAATGGCTGGG
TGAAGTCCCTGCGAAGACACTTGCTCAGGGACAGAAGGTGTTGAAAGATG
CCTGGGCTGCATGAGAGGTGCCAATGGTATCGGCGCTAGTCTTGTCGAGC
TTTGCTGTGAAAACAACGCCTACGTATGCATTGGCGACATTGATTCTACT
GCCGGTGCACCCTTGAGCCGGAAGTGTCGCGAGAAATGGCCTGTCTACTG
GGACCCCTCTGGACCCCCGAAACCTCCGCGCTCCTCCTTCCAAGAGACCG
ATATCACGAACTACCAATCTGTGCTGGATCTCTTTGACTTTACGTTCAAG
ACCTACAAGCGCATTGACCATGTCGTCGTTACTGCTGGCAGTATGGAACC
AAAGGAGAATTGGTTTGACAATGCTCTAAGCCTTCAGGCTGTGCGCGAGA
TGATCGCCCCTACTGAGCCCGTTCTCTCCTCCAATTCGGCCACCCCCATC
ACCCAGTTCCACCCTGAAATCACTCGGGAGGCTTTGGAAGAAAAGGTCAT
TCTCATTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:4626939..4628044 - |
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