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CAN33_49800-T1, CAN33_49800-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_49800-T1
Unique NameCAN33_49800-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4814557..4815454-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_49800-T1 ID=CAN33_49800-T1|Name=CAN33_49800-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=898bp|location=Sequence derived from alignment at NKJJ01000022.1:4814557..4815454- (Aspergillus niger FDAARGOS_311)
ATGTCCCAATCTGATTCCTTTCTCAGCCTTCAAGGCAAAGTAGCCCTCAT
TACCGGATCTGGTAAAACGAGAGGCATTGGTGCCGCAATTGCCACTCTCC
TGGCCCACCACGGTGCAGCGGTTATCCTCAACTATGTCTCACCGTCCACA
GGCCCTTCCGCTGCCACCGTGGCGCAGAGCATCACCGCGGCGGGCGGACA
GGCCCTGGCCGTACAGGCGGACATCTCCCGACCTGACGAAGCACAGAAGC
TTGTGCAAGCAGCAGTCAATGCCTTTGGAAGGCTTGATATCCTAGGTTTG
TCCACGAACACCTCCGCCTCCCTGGCTTGGACGCTTGCTGACGAGGACCA
GTCAACAACGCGGCCACTGGCACTCCAGGACCGGTACTCAGCGCTGCGCC
TGAAGCTCTTGCGACCACCTTTGCTGTCAATGTCTTTGGTCCAATCTACC
TCATGCAGGAAGCAGTGAAGCACATGCCGCCACGCAGTCGAGTCATCAAC
ATCGGATCGGTGGCGTCCAAGTTGGGAATTTCAGGATCCCCAGTCTATAG
CGCCTCAAAGGCGGCGATGGATGCGCTGACGTTTTCCATGGCAATGGAGG
TAAGCTGGGCTCTAATGTGGGAACCCGCACGGGACGTGTGCTAATTGGTG
TCTAGCTTGGTCGCAATCATGGCGGCATAACCATCAACACAGTTTCCCCC
GGTCCGGTAGATACAGATGGTCTACCGCCTCAGGTGGCGGAAAAGATCAA
CAAGACAATGGTTCCCATGAGCCGAGTCGAGGAGCGATTGGGAACCGTGC
AGGATATCGCGGACGCAGTGCTGTTGTTGTGCTCGGAGAAGAGTCGCTGG
ATCTCCGGACAGGTCATTTCCGTCAGTGGTGGAATTGTGGGTGGCTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4814557..4815454-

>CAN33_49800-T1 ID=CAN33_49800-T1|Name=CAN33_49800-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2358bp|location=Sequence derived from alignment at NKJJ01000022.1:4814557..4815454- (Aspergillus niger FDAARGOS_311)
CTTGGTCGCAATCATGGCGGCATAACCATCAACACAGTTTCCCCCGGTCC
GGTAGATACAGATGGTCTACCGCCTCAGGTGGCGGAAAAGATCAACAAGA
CAATGGTTCCCATGAGCCGAGTCGAGGAGCGATTGGGAACCGTGCAGGAT
ATCGCGGACGCAGTGCTGTTGTTGTGCTCGGAGAAGAGTCGCTGGATCTC
CGGACAGGTCATTTCCGTCAGTGGTGGAATTGTGGGTGGCTAGTCAACAA
CGCGGCCACTGGCACTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGCTC
TTGCGACCACCTTTGCTGTCAATGTCTTTGGTCCAATCTACCTCATGCAG
GAAGCAGTGAAGCACATGCCGCCACGCAGTCGAGTCATCAACATCGGATC
GGTGGCGTCCAAGTTGGGAATTTCAGGATCCCCAGTCTATAGCGCCTCAA
AGGCGGCGATGGATGCGCTGACGTTTTCCATGGCAATGGAGATGTCCCAA
TCTGATTCCTTTCTCAGCCTTCAAGGCAAAGTAGCCCTCATTACCGGATC
TGGTAAAACGAGAGGCATTGGTGCCGCAATTGCCACTCTCCTGGCCCACC
ACGGTGCAGCGGTTATCCTCAACTATGTCTCACCGTCCACAGGCCCTTCC
GCTGCCACCGTGGCGCAGAGCATCACCGCGGCGGGCGGACAGGCCCTGGC
CGTACAGGCGGACATCTCCCGACCTGACGAAGCACAGAAGCTTGTGCAAG
CAGCAGTCAATGCCTTTGGAAGGCTTGATATCCTAGCTTGGTCGCAATCA
TGGCGGCATAACCATCAACACAGTTTCCCCCGGTCCGGTAGATACAGATG
GTCTACCGCCTCAGGTGGCGGAAAAGATCAACAAGACAATGGTTCCCATG
AGCCGAGTCGAGGAGCGATTGGGAACCGTGCAGGATATCGCGGACGCAGT
GCTGTTGTTGTGCTCGGAGAAGAGTCGCTGGATCTCCGGACAGGTCATTT
CCGTCAGTGGTGGAATTGTGGGTGGCTAGTCAACAACGCGGCCACTGGCA
CTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGCTCTTGCGACCACCTTT
GCTGTCAATGTCTTTGGTCCAATCTACCTCATGCAGGAAGCAGTGAAGCA
CATGCCGCCACGCAGTCGAGTCATCAACATCGGATCGGTGGCGTCCAAGT
TGGGAATTTCAGGATCCCCAGTCTATAGCGCCTCAAAGGCGGCGATGGAT
GCGCTGACGTTTTCCATGGCAATGGAGATGTCCCAATCTGATTCCTTTCT
CAGCCTTCAAGGCAAAGTAGCCCTCATTACCGGATCTGGTAAAACGAGAG
GCATTGGTGCCGCAATTGCCACTCTCCTGGCCCACCACGGTGCAGCGGTT
ATCCTCAACTATGTCTCACCGTCCACAGGCCCTTCCGCTGCCACCGTGGC
GCAGAGCATCACCGCGGCGGGCGGACAGGCCCTGGCCGTACAGGCGGACA
TCTCCCGACCTGACGAAGCACAGAAGCTTGTGCAAGCAGCAGTCAATGCC
TTTGGAAGGCTTGATATCCTAGCTTGGTCGCAATCATGGCGGCATAACCA
TCAACACAGTTTCCCCCGGTCCGGTAGATACAGATGGTCTACCGCCTCAG
GTGGCGGAAAAGATCAACAAGACAATGGTTCCCATGAGCCGAGTCGAGGA
GCGATTGGGAACCGTGCAGGATATCGCGGACGCAGTGCTGTTGTTGTGCT
CGGAGAAGAGTCGCTGGATCTCCGGACAGGTCATTTCCGTCAGTGGTGGA
ATTGTGGGTGGCTAGTCAACAACGCGGCCACTGGCACTCCAGGACCGGTA
CTCAGCGCTGCGCCTGAAGCTCTTGCGACCACCTTTGCTGTCAATGTCTT
TGGTCCAATCTACCTCATGCAGGAAGCAGTGAAGCACATGCCGCCACGCA
GTCGAGTCATCAACATCGGATCGGTGGCGTCCAAGTTGGGAATTTCAGGA
TCCCCAGTCTATAGCGCCTCAAAGGCGGCGATGGATGCGCTGACGTTTTC
CATGGCAATGGAGATGTCCCAATCTGATTCCTTTCTCAGCCTTCAAGGCA
AAGTAGCCCTCATTACCGGATCTGGTAAAACGAGAGGCATTGGTGCCGCA
ATTGCCACTCTCCTGGCCCACCACGGTGCAGCGGTTATCCTCAACTATGT
CTCACCGTCCACAGGCCCTTCCGCTGCCACCGTGGCGCAGAGCATCACCG
CGGCGGGCGGACAGGCCCTGGCCGTACAGGCGGACATCTCCCGACCTGAC
GAAGCACAGAAGCTTGTGCAAGCAGCAGTCAATGCCTTTGGAAGGCTTGA
TATCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_49800CAN33_49800Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49800-T1CAN33_49800-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49800-T1.cdsCAN33_49800-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49800-T1.exon3CAN33_49800-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_49800-T1.exon2CAN33_49800-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_49800-T1.exon1CAN33_49800-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4814557..4815454 -
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