You are here

Home

CAN33_49850-T1, CAN33_49850-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_49850-T1
Unique NameCAN33_49850-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4834422..4835579+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_49850-T1 ID=CAN33_49850-T1|Name=CAN33_49850-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1158bp|location=Sequence derived from alignment at NKJJ01000022.1:4834422..4835579+ (Aspergillus niger FDAARGOS_311)
ATGGTCAAGCTACTTCCTACCTTCGTTTTCCAAGCTGGATTTGCTCTCGC
GACAGCGGAGTATCTCAACTGGACCACGTACAGCGCCAACGGGGTAAATT
TGGGCGGGTGGCTCGAGCAAGAAAGCACCATCGATACTACTTGGTGGGCT
AAATATTCCAAGGGTGCGGACGATGAATGGGGCCTTTGTGTGAATCAAGG
CTCCCAGTGTGGTCCTATTCTTGAGCGAAGATATGCGACCTATATCACCA
CCTCAGATATCGATACGTTGGCGAACGCCGGAGTGAACACTTTGCGTATC
CCCACCACATATGCTGCTTGGGTCAAAGTGCCCGGGTCCCAGCTGTACTC
TGGGAACCAGGTATCCTTTCTGAACAACATTGCAACATATGCTATCACTA
GGTATTCCATGCATATCATCATCGATGTACACTCCTTACCAGGTGGAGTG
AACGGTAAGGCGTTCGGGGAGGCAACAGGACATTACGGATGGTTCAACAA
CCAAACGGCGTTGGATTACTCCCTTCAGGCTATCGATTCCGTCATTGCCT
ATATTCAGAACTCCAGCAATCCTGGATCCTATACTATTGAGCCTATCAAC
GAGCCCGTCGACAATAAAGATATGTCAGCATTCGGGAGTCCAGAAGCATT
ATCCGATGAAGGCGCAGCTTGGGTTTTGAAGTACATTCAGGCAGTACTGG
ACAAGGTTGAGGTGATCAGCCCGGATATACCGGTCATGTTCCAAGGCAGT
TTCCGAGGCGAGGAGTACTGGTCACCCAACTTCTCTACATCCGCTAACCT
GGTATTCGATGTGCACAACTATTATTTTGCCGGACGAGGAGCAACCGGTA
AGAATATTACGACCTACATCTGTGCCGATGCAAAGAATGGAGCCGGTGAT
GGCAAATTTCCCGTATTTGTCGGCGAATGGTCGATCCAGGCACAGTACAA
TAACTCCTTTGCTGACAGAGATGAAGCTCTCAACACCGGGCTCTATGCTT
CTGCGAAAGATTCCCAGGGGAGTGCCTATTGGAATGCCAAGTTTTCGGGG
AATGCAACCGTCGACGGCCAAGGTACACAGGCTGACTACTGGAATTACAT
GACCTGGATTGACAATGACATGATCCATCCGGACGAAGCTTCTGGGGTGT
GTGCATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:4834422..4835579+

>CAN33_49850-T1 ID=CAN33_49850-T1|Name=CAN33_49850-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1158bp|location=Sequence derived from alignment at NKJJ01000022.1:4834422..4835579+ (Aspergillus niger FDAARGOS_311)
ATGGTCAAGCTACTTCCTACCTTCGTTTTCCAAGCTGGATTTGCTCTCGC
GACAGCGGAGTATCTCAACTGGACCACGTACAGCGCCAACGGGGTAAATT
TGGGCGGGTGGCTCGAGCAAGAAAGCACCATCGATACTACTTGGTGGGCT
AAATATTCCAAGGGTGCGGACGATGAATGGGGCCTTTGTGTGAATCAAGG
CTCCCAGTGTGGTCCTATTCTTGAGCGAAGATATGCGACCTATATCACCA
CCTCAGATATCGATACGTTGGCGAACGCCGGAGTGAACACTTTGCGTATC
CCCACCACATATGCTGCTTGGGTCAAAGTGCCCGGGTCCCAGCTGTACTC
TGGGAACCAGGTATCCTTTCTGAACAACATTGCAACATATGCTATCACTA
GGTATTCCATGCATATCATCATCGATGTACACTCCTTACCAGGTGGAGTG
AACGGTAAGGCGTTCGGGGAGGCAACAGGACATTACGGATGGTTCAACAA
CCAAACGGCGTTGGATTACTCCCTTCAGGCTATCGATTCCGTCATTGCCT
ATATTCAGAACTCCAGCAATCCTGGATCCTATACTATTGAGCCTATCAAC
GAGCCCGTCGACAATAAAGATATGTCAGCATTCGGGAGTCCAGAAGCATT
ATCCGATGAAGGCGCAGCTTGGGTTTTGAAGTACATTCAGGCAGTACTGG
ACAAGGTTGAGGTGATCAGCCCGGATATACCGGTCATGTTCCAAGGCAGT
TTCCGAGGCGAGGAGTACTGGTCACCCAACTTCTCTACATCCGCTAACCT
GGTATTCGATGTGCACAACTATTATTTTGCCGGACGAGGAGCAACCGGTA
AGAATATTACGACCTACATCTGTGCCGATGCAAAGAATGGAGCCGGTGAT
GGCAAATTTCCCGTATTTGTCGGCGAATGGTCGATCCAGGCACAGTACAA
TAACTCCTTTGCTGACAGAGATGAAGCTCTCAACACCGGGCTCTATGCTT
CTGCGAAAGATTCCCAGGGGAGTGCCTATTGGAATGCCAAGTTTTCGGGG
AATGCAACCGTCGACGGCCAAGGTACACAGGCTGACTACTGGAATTACAT
GACCTGGATTGACAATGACATGATCCATCCGGACGAAGCTTCTGGGGTGT
GTGCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_49850CAN33_49850Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49850-T1.exon1CAN33_49850-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49850-T1.cdsCAN33_49850-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_49850-T1CAN33_49850-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH5_14
NoteCAZy:GH5_15
NoteCAZy:GH5_44
NoteCAZy:GH5_9
NoteCAZy:GH5_23
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001547
DBxrefPFAM:PF00150
ProductCellulase (glycosyl hydrolase family 5) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4834422..4835579 +
Powered by Drupal