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CAN33_50050-T1, CAN33_50050-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50050-T1
Unique NameCAN33_50050-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4980830..4981644-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50050-T1 ID=CAN33_50050-T1|Name=CAN33_50050-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=815bp|location=Sequence derived from alignment at NKJJ01000022.1:4980830..4981644- (Aspergillus niger FDAARGOS_311)
ATGCGTGGGTGAATTGGTAGAAATGCTTGCAGATAAATAATTTCTCGGCC
GAGCATTCATCGTGACCGGTGGAGCCTCTGGAATTGGCCTAGAGATTGTC
AACGAGCTCCTTCGTCAGTCAGCCACGGTGCACGTTCTGGACATCTCCTC
GAAGTTCCCTGAAACATCCCAAGCTCTACAGCATCGACTGCATTTCTACC
CGGCGACCGATGTGAGCTCGCGAGAAAGTGTCAGCCGGACCATCAAGATA
ATCATTCAGAAGTGCCCCGACATCCACGGCCTCGTCAACTGTGCTGGTGT
CTACCGACAAAGCGCCTCCGTCATTGATTCCGACGAGAACTTCCACAAGG
TTATGTCGGTTAATCTCGATGGGGTTTGGAACACGGGGACGGAGTACCTT
CGCTACGTTCTGGACAAGGGGGCTAACGATCCTACCCGCAGTCAACCCGA
GCAAGGGCCAGGATCAGTTGAAAAGTGCGCAGGCAGCGGCACCAGTAGCT
GCAGCATGGTAAACATTGGCTCCACCATCGTGCTGCAGGGGCTTCCAGGG
ATGGCAGCGTATGCGGCTAGTAAGCATGCCATTGTGGGCCTAACGAGGGG
TGAGAATCAACTGCGTCGCCCCTGGTGTCACAGATACCCCATTACTCAGA
CAACATTACACTGAGGCAAGCATTGCGGAGAACTGGCTGAGTACCATTCC
CATGGGTAGGGTGGGGAGCTGCAAGGAGGTTGCTAATGCGGTTGTTTTCC
TTCTGGGCGATGCTTCCAGCTATATCACCGGTCAAGTCCTGGCGGTTAGT
GGCGGATTTCCATAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4980830..4981644-

>CAN33_50050-T1 ID=CAN33_50050-T1|Name=CAN33_50050-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2160bp|location=Sequence derived from alignment at NKJJ01000022.1:4980830..4981644- (Aspergillus niger FDAARGOS_311)
AATCAACTGCGTCGCCCCTGGTGTCACAGATACCCCATTACTCAGACAAC
ATTACACTGAGGCAAGCATTGCGGAGAACTGGCTGAGTACCATTCCCATG
GGTAGGGTGGGGAGCTGCAAGGAGGTTGCTAATGCGGTTGTTTTCCTTCT
GGGCGATGCTTCCAGCTATATCACCGGTCAAGTCCTGGCGGTTAGTGGCG
GATTTCCATAACATTCATCGTGACCGGTGGAGCCTCTGGAATTGGCCTAG
AGATTGTCAACGAGCTCCTTCGTCAGTCAGCCACGGTGCACGTTCTGGAC
ATCTCCTCGAAGTTCCCTGAAACATCCCAAGCTCTACAGCATCGACTGCA
TTTCTACCCGGCGACCGATGTGAGCTCGCGAGAAAGTGTCAGCCGGACCA
TCAAGATAATCATTCAGAAGTGCCCCGACATCCACGGCCTCGTCAACTGT
GCTGGTGTCTACCGACAAAGCGCCTCCGTCATTGATTCCGACGAGAACTT
CCACAAGGTTATGTCGGTTAATCTCGATGGGGTTTGGAACACGGGGACGG
AGTACCTTCGCTACGTTCTGGACAAGGGGGCTAACGATCCTACCCGCAGT
CAACCCGAGCAAGGGCCAGGATCAGTTGAAAAGTGCGCAGGCAGCGGCAC
CAGTAGCTGCAGCATGGTAAACATTGGCTCCACCATCGTGCTGCAGGGGC
TTCCAGGGATGGCAGCATGCAATCAACTGCGTCGCCCCTGGTGTCACAGA
TACCCCATTACTCAGACAACATTACACTGAGGCAAGCATTGCGGAGAACT
GGCTGAGTACCATTCCCATGGGTAGGGTGGGGAGCTGCAAGGAGGTTGCT
AATGCGGTTGTTTTCCTTCTGGGCGATGCTTCCAGCTATATCACCGGTCA
AGTCCTGGCGGTTAGTGGCGGATTTCCATAACATTCATCGTGACCGGTGG
AGCCTCTGGAATTGGCCTAGAGATTGTCAACGAGCTCCTTCGTCAGTCAG
CCACGGTGCACGTTCTGGACATCTCCTCGAAGTTCCCTGAAACATCCCAA
GCTCTACAGCATCGACTGCATTTCTACCCGGCGACCGATGTGAGCTCGCG
AGAAAGTGTCAGCCGGACCATCAAGATAATCATTCAGAAGTGCCCCGACA
TCCACGGCCTCGTCAACTGTGCTGGTGTCTACCGACAAAGCGCCTCCGTC
ATTGATTCCGACGAGAACTTCCACAAGGTTATGTCGGTTAATCTCGATGG
GGTTTGGAACACGGGGACGGAGTACCTTCGCTACGTTCTGGACAAGGGGG
CTAACGATCCTACCCGCAGTCAACCCGAGCAAGGGCCAGGATCAGTTGAA
AAGTGCGCAGGCAGCGGCACCAGTAGCTGCAGCATGGTAAACATTGGCTC
CACCATCGTGCTGCAGGGGCTTCCAGGGATGGCAGCATGCAATCAACTGC
GTCGCCCCTGGTGTCACAGATACCCCATTACTCAGACAACATTACACTGA
GGCAAGCATTGCGGAGAACTGGCTGAGTACCATTCCCATGGGTAGGGTGG
GGAGCTGCAAGGAGGTTGCTAATGCGGTTGTTTTCCTTCTGGGCGATGCT
TCCAGCTATATCACCGGTCAAGTCCTGGCGGTTAGTGGCGGATTTCCATA
ACATTCATCGTGACCGGTGGAGCCTCTGGAATTGGCCTAGAGATTGTCAA
CGAGCTCCTTCGTCAGTCAGCCACGGTGCACGTTCTGGACATCTCCTCGA
AGTTCCCTGAAACATCCCAAGCTCTACAGCATCGACTGCATTTCTACCCG
GCGACCGATGTGAGCTCGCGAGAAAGTGTCAGCCGGACCATCAAGATAAT
CATTCAGAAGTGCCCCGACATCCACGGCCTCGTCAACTGTGCTGGTGTCT
ACCGACAAAGCGCCTCCGTCATTGATTCCGACGAGAACTTCCACAAGGTT
ATGTCGGTTAATCTCGATGGGGTTTGGAACACGGGGACGGAGTACCTTCG
CTACGTTCTGGACAAGGGGGCTAACGATCCTACCCGCAGTCAACCCGAGC
AAGGGCCAGGATCAGTTGAAAAGTGCGCAGGCAGCGGCACCAGTAGCTGC
AGCATGGTAAACATTGGCTCCACCATCGTGCTGCAGGGGCTTCCAGGGAT
GGCAGCATGC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50050CAN33_50050Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50050-T1CAN33_50050-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50050-T1.cdsCAN33_50050-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50050-T1.exon3CAN33_50050-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50050-T1.exon2CAN33_50050-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50050-T1.exon1CAN33_50050-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4980830..4981644 -
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