You are here

Home

CAN33_50075-T1, CAN33_50075-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50075-T1
Unique NameCAN33_50075-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4993897..4994487-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50075-T1 ID=CAN33_50075-T1|Name=CAN33_50075-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=591bp|location=Sequence derived from alignment at NKJJ01000022.1:4993897..4994487- (Aspergillus niger FDAARGOS_311)
ATGGCTTCGTATAAGGCAGTCATATTTGACATGGGCGATGTGCTCTTCAC
ATGGAACCCCCAGGCAGACACTCAAGTAACTCACGAGACCCTCGCCCACA
TCGTGCAAAGCACCACATGGAACCGATACGAACGTGGTTTGCTATCAGCC
GAACAGTGTTACGGACAGTTTAGCAGCGACTTCGCGATCCCACCATCGGA
CCTTGCAGAAACATTTAAGCAGACCACCGGTTCTCTCAAGCCTGACTCTA
CCATGACAATGCTGCTACACCGACTCAAGGCCCAGGGGTATCGCCTATAC
ATGATGACCAATATTCCGCAGCTAGACTTTGACCTCCTTCGCAATACCGA
ATATGTGTGGCATTTATTCGATCGGATTTTCGCTTCTGGCTACGTGGGGA
TGCGAAAGCCGGACCTTGAGTTCTACCAGTGGGTTTTGAATGTTACAGGA
TTGACCGCTGCTGAAGGAATCTTTGTTGATGATAAGGAGGAGAATGTGGC
GGCAGCTGAGAGGGTAGGGATGTTAGCGATTCATTTCCGGAATGCGGCGG
CAACCAGCAAGGAGCTGCAGGCTTTATTGAACCTTGCATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:4993897..4994487-

>CAN33_50075-T1 ID=CAN33_50075-T1|Name=CAN33_50075-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=591bp|location=Sequence derived from alignment at NKJJ01000022.1:4993897..4994487- (Aspergillus niger FDAARGOS_311)
ATGGCTTCGTATAAGGCAGTCATATTTGACATGGGCGATGTGCTCTTCAC
ATGGAACCCCCAGGCAGACACTCAAGTAACTCACGAGACCCTCGCCCACA
TCGTGCAAAGCACCACATGGAACCGATACGAACGTGGTTTGCTATCAGCC
GAACAGTGTTACGGACAGTTTAGCAGCGACTTCGCGATCCCACCATCGGA
CCTTGCAGAAACATTTAAGCAGACCACCGGTTCTCTCAAGCCTGACTCTA
CCATGACAATGCTGCTACACCGACTCAAGGCCCAGGGGTATCGCCTATAC
ATGATGACCAATATTCCGCAGCTAGACTTTGACCTCCTTCGCAATACCGA
ATATGTGTGGCATTTATTCGATCGGATTTTCGCTTCTGGCTACGTGGGGA
TGCGAAAGCCGGACCTTGAGTTCTACCAGTGGGTTTTGAATGTTACAGGA
TTGACCGCTGCTGAAGGAATCTTTGTTGATGATAAGGAGGAGAATGTGGC
GGCAGCTGAGAGGGTAGGGATGTTAGCGATTCATTTCCGGAATGCGGCGG
CAACCAGCAAGGAGCTGCAGGCTTTATTGAACCTTGCATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50075CAN33_50075Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50075-T1.cdsCAN33_50075-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50075-T1.exon1CAN33_50075-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50075-T1CAN33_50075-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR023214
DBxrefInterPro:IPR041492
DBxrefInterPro:IPR006439
DBxrefPFAM:PF13419
ProductHaloacid dehalogenase-like hydrolase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4993897..4994487 -
Powered by Drupal