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CAN33_50090-T1, CAN33_50090-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50090-T1
Unique NameCAN33_50090-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:4997860..4998701+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50090-T1 ID=CAN33_50090-T1|Name=CAN33_50090-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=842bp|location=Sequence derived from alignment at NKJJ01000022.1:4997860..4998701+ (Aspergillus niger FDAARGOS_311)
ATGGGAAAAGCGGATATTCCACTCTCCCTCCACGATAAGGTAGCTCTCGT
TACGGGTGGCGGGTCTGGTATTGGTTTCGCCGCGGCCCTTTCTTTGGCCC
AGGCAGGAGCCAAGGTCGTGATAGCGGACATCAACGAGACTCGCGGGAAG
GCTAGTACTCTGAAGATCAGCCAACTGGCCCATAATGTCCACTTTGTCCC
CGTTGGTGTGAGCCAGTCAGCTAGTGTGCGCGAAATGATCGATACCACTG
TGCGGGTCTACGGTCGTCTGGATATAGCAGTCAACAACGCTGGCATTGGC
CCAGACTCAGTGGCCATCGCAAACCTGGATGAAGGCAGCTGGGATCGCTT
GATCGCTACCAATCTCACTGGTGTGGCTCTTTGCTTGAAGTGGGAGTTGC
AGCAGATAATCGCACAGGGTGGTGGTCATCTGCATGCACATTGCGACCAC
ACGAGGGCATGGCAGCCTACGCCGCGACAAAGCACGGGATCCTTGGCCTC
ACCCGGGTAGCTGCTTTGGAGAATGGAAAACATGGCATCCGTGTCAACGC
TCTGACCCCTGGAGGGATAGAGACTGAGCTTACATCAGCCTATGTGAAAG
ACCCGCGGTTCACGGCAGAAATGAATGCTAGAACCAGTGTTTTTGGCCGA
TTTGCTCAGCCCTGCGAAATTGCCCAGGTGGTAGTGTGGCTAGCGTCAGA
ATCCTCTTCATACATCACGGGATCGCAATACCAGTTGATGGTGGCTTTGG
GCTGGCCTGATAACTGTGAAGACAGCTCTTGGTCTCATGCTCTTGTGAAT
TCAGTTGCAGAACCTACTGGCAGAAGTTGGGATGACGGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:4997860..4998701+

>CAN33_50090-T1 ID=CAN33_50090-T1|Name=CAN33_50090-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1590bp|location=Sequence derived from alignment at NKJJ01000022.1:4997860..4998701+ (Aspergillus niger FDAARGOS_311)
ATGGGAAAAGCGGATATTCCACTCTCCCTCCACGATAAGGTAGCTCTCGT
TACGGGTGGCGGGTCTGGTATTGGTTTCGCCGCGGCCCTTTCTTTGGCCC
AGGCAGGAGCCAAGGTCGTGATAGCGGACATCAACGAGACTCGCGGGAAG
GCTAGTACTCTGAAGATCAGCCAACTGGCCCATAATGTCCACTTTGTCCC
CGTTGGTGTGAGCCAGTCAGCTAGTGTGCGCGAAATGATCGATACCACTG
TGCGGGTCTACGGTCGTCTGGATATAGCAGTCAACAACGCTGGCATTGGC
CCAGACTCAGTGGCCATCGCAAACCTGGATGAAGGCAGCTGGGATCGCTT
GATCGCTACCAATCTCACTGGGTGGTGGTCATCTGCATGCACATTGCGAC
CACACGAGGGCATGGCAGCCTACGCCGCGACAAAGCACGGGATCCTTGGC
CTCACCCGGGTAGCTGCTTTGGAGAATGGAAAACATGGCATCCGTGTCAA
CGCTCTGACCCCTGGAGGGATAGAGACTGAGCTTACATCAGCCTATGTGA
AAGACCCGCGGTTCACGGCAGAAATGAATGCTAGAACCAGTGTTTTTGGC
CGATTTGCTCAGCCCTGCGAAATTGCCCAGGTGGTAGTGTGGCTAGCGTC
AGAATCCTCTTCATACATCACGGGATCGCAATACCAGTTGATGGTGGCTT
TGGGCTGGCCTGATAACTGTGAAGACAGCTCTTGGTCTCATGCTCTTGTG
AATTCAGTTGCAGAACCTACTGGCAGAAGTTGGGATGACGGGTGAATGGG
AAAAGCGGATATTCCACTCTCCCTCCACGATAAGGTAGCTCTCGTTACGG
GTGGCGGGTCTGGTATTGGTTTCGCCGCGGCCCTTTCTTTGGCCCAGGCA
GGAGCCAAGGTCGTGATAGCGGACATCAACGAGACTCGCGGGAAGGCTAG
TACTCTGAAGATCAGCCAACTGGCCCATAATGTCCACTTTGTCCCCGTTG
GTGTGAGCCAGTCAGCTAGTGTGCGCGAAATGATCGATACCACTGTGCGG
GTCTACGGTCGTCTGGATATAGCAGTCAACAACGCTGGCATTGGCCCAGA
CTCAGTGGCCATCGCAAACCTGGATGAAGGCAGCTGGGATCGCTTGATCG
CTACCAATCTCACTGGGTGGTGGTCATCTGCATGCACATTGCGACCACAC
GAGGGCATGGCAGCCTACGCCGCGACAAAGCACGGGATCCTTGGCCTCAC
CCGGGTAGCTGCTTTGGAGAATGGAAAACATGGCATCCGTGTCAACGCTC
TGACCCCTGGAGGGATAGAGACTGAGCTTACATCAGCCTATGTGAAAGAC
CCGCGGTTCACGGCAGAAATGAATGCTAGAACCAGTGTTTTTGGCCGATT
TGCTCAGCCCTGCGAAATTGCCCAGGTGGTAGTGTGGCTAGCGTCAGAAT
CCTCTTCATACATCACGGGATCGCAATACCAGTTGATGGTGGCTTTGGGC
TGGCCTGATAACTGTGAAGACAGCTCTTGGTCTCATGCTCTTGTGAATTC
AGTTGCAGAACCTACTGGCAGAAGTTGGGATGACGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50090CAN33_50090Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50090-T1.exon1CAN33_50090-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50090-T1.exon2CAN33_50090-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50090-T1.cdsCAN33_50090-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50090-T1CAN33_50090-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:4997860..4998701 +
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