You are here

Home

CAN33_50135-T1, CAN33_50135-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50135-T1
Unique NameCAN33_50135-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:30659..32646-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50135-T1 ID=CAN33_50135-T1|Name=CAN33_50135-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1988bp|location=Sequence derived from alignment at NKJJ01000020.1:30659..32646- (Aspergillus niger FDAARGOS_311)
ATGGCCAGCCATGGTGGGGTGAAGAAGAATAATCGTCCCAAGTCAAATTG
CGACTTTTTCTATTCTCAAGACTTTATTTTCGAAGACCTACTGCTGGGAG
TGGCCGCAAAAAGACTGGCCTTCAAACCAGCGGAGACCTATACCCCTGTT
CAACATTTCCAGAGCATTTTTGCACAAGACATTGGTAGAACACATGCCAC
AATGCCTACGGTACATCTGCTAGATTACGTCGCCGGAAATGTCCGCTCCC
TGGTCAATGCGATCAACAAAGTCGGCTATGAGGTGGAATGGATTAAGTCT
CCAAGTGATCTGAAGAATGCAGAGGTAAAACAAAGTGATATTACAAACCA
CACAATGTTGCGCTAACTGTTTAACAGAAGCTCATCCTACCAGGTGTCGG
TCATTTCGGCCATTGCTTATCTCAACTTTCAGAGGGAGGCTACTTGGATC
CGATCAGGCAACACATAGCTTCCGGGAAGCCATTCATGGGAATTTGTGTT
GGTCTACAATCACTTTTTGAAGGGTCTGAGGAGGACTCAGATGTTCCGGG
GCTGGGATTGATTCCGATGCGGATGCAGAAATTCAATCCCGACACTAAGA
GTGTACCCCACATAGGCTGGAACTCTGCTATAGACACCAAAATTGGGTCT
GCGGATAGTCAGAGCTTCTACGGATTAGTCCCAAGCAGCAAATACTACTA
CGTCCACTCCTACGCAGCTCTCTACACCCCAGGGCTCCTTGAGAAGGATG
GCTGGTCAGTCGCCACAGCTACTTACGGCGAAGAAGAATTTGTCGGTGCT
ATTGCACGAGAGAATGTCTTCGCGACTCAGTTCCACCCGGAGAAAAGTGG
CCAGGCTGGATTACGGACTATTAGCGCCTTCCTAAATGGTGATCGCTTTC
AAATGCTTACCCCGCAAGCGTCGCTCTCCTTGGACAAAAAAGATGGGCTG
ACACGTAGAATCATTGCCTGTCTTGATGTTCGCACCAATGATTCTGGTGA
TCTCGTCGTCACGAAAGGGGACCAGTATGATGTTCGTGAAAAGGACGGGG
TAGATACAGGAGGCCAAGTCAGAAACTTAGGGAAGCCCGTGGACATGGCC
AAGAAGTACTACGAACAAGGGGCTGATGAGGTGACGTTCTTGAACATCAC
TTCCTTCAGAAACTGTCCTATTGCAGATGCTCCCATGCTGGAAATCCTCA
GGAGGACCTCAGAAACTGTCTTCGTACCGCTGACTATCGGGGGCGGTATC
AAGGACACTATTGACACAGATGGCACTCACGTCTCAGCCCTTGATGTTGC
GACAATGTATTTCAAGTCTGGTGCCGATAAAGTCAGCATCGGTTCGGATG
CTGTTATCGCAGCAGAGGAGTATTATGAAGGGGGCGAAAAGCTGACTGGC
AAGACGGCTATAGAATCTATATCAAAAGCATATGGTAACCAGGCTGTGGT
CGTGAGTGTGGATCCTAAACGTGTCTATGTGGACGGGCCAGAAGATACCA
ACCATCATACAATCCGGACAAAGTACCCGAATGCTGCTGGCCAGACGTTT
TGCTGGTACCAATGCACTATCAAGGGTGGCAGAGAGTCTCGAGACCTCGA
CGTCCGGCAACTAGCGAAGGCGGTTGAAGCAATGGGTGCTGGTGAACTCT
TGCTAAATTGCATCGACAAGGACGGAAGCAACAGCGGATTTGATCTGGAA
TTGATCAGTGATGTGAAAGCCGCCATTAAGATACCAGTGATTGCCTCCAG
CGGTGCTGGAAACCCCGAACATTTTGCAGAAGTCTTCCAAAATACTACGA
CTGATGCCGCCCTAGGCGCTGGCATGGTAAGTAATAATTTCGTTCAAACC
GGTCGAGAACCCGTTTAGTTGGCTAATTTCTTATCTAAACTTTCACAGTT
CCACCGAGGTGAATATACTGTCAGCGATGTCAAACGTCACTTGGACAATG
GAGGATTTCTCGTCCGCAGGCCTGAAGTGGGCAATTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:30659..32646-

>CAN33_50135-T1 ID=CAN33_50135-T1|Name=CAN33_50135-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5589bp|location=Sequence derived from alignment at NKJJ01000020.1:30659..32646- (Aspergillus niger FDAARGOS_311)
TTCCACCGAGGTGAATATACTGTCAGCGATGTCAAACGTCACTTGGACAA
TGGAGGATTTCTCGTCCGCAGGCCTGAAGTGGGCAATTAAAAGCTCATCC
TACCAGGTGTCGGTCATTTCGGCCATTGCTTATCTCAACTTTCAGAGGGA
GGCTACTTGGATCCGATCAGGCAACACATAGCTTCCGGGAAGCCATTCAT
GGGAATTTGTGTTGGTCTACAATCACTTTTTGAAGGGTCTGAGGAGGACT
CAGATGTTCCGGGGCTGGGATTGATTCCGATGCGGATGCAGAAATTCAAT
CCCGACACTAAGAGTGTACCCCACATAGGCTGGAACTCTGCTATAGACAC
CAAAATTGGGTCTGCGGATAGTCAGAGCTTCTACGGATTAGTCCCAAGCA
GCAAATACTACTACGTCCACTCCTACGCAGCTCTCTACACCCCAGGGCTC
CTTGAGAAGGATGGCTGGTCAGTCGCCACAGCTACTTACGGCGAAGAAGA
ATTTGTCGGTGCTATTGCACGAGAGAATGTCTTCGCGACTCAGTTCCACC
CGGAGAAAAGTGGCCAGGCTGGATTACGGACTATTAGCGCCTTCCTAAAT
GGTGATCGCTTTCAAATGCTTACCCCGCAAGCGTCGCTCTCCTTGGACAA
AAAAGATGGGCTGACACGTAGAATCATTGCCTGTCTTGATGTTCGCACCA
ATGATTCTGGTGATCTCGTCGTCACGAAAGGGGACCAGTATGATGTTCGT
GAAAAGGACGGGGTAGATACAGGAGGCCAAGTCAGAAACTTAGGGAAGCC
CGTGGACATGGCCAAGAAGTACTACGAACAAGGGGCTGATGAGGTGACGT
TCTTGAACATCACTTCCTTCAGAAACTGTCCTATTGCAGATGCTCCCATG
CTGGAAATCCTCAGGAGGACCTCAGAAACTGTCTTCGTACCGCTGACTAT
CGGGGGCGGTATCAAGGACACTATTGACACAGATGGCACTCACGTCTCAG
CCCTTGATGTTGCGACAATGTATTTCAAGTCTGGTGCCGATAAAGTCAGC
ATCGGTTCGGATGCTGTTATCGCAGCAGAGGAGTATTATGAAGGGGGCGA
AAAGCTGACTGGCAAGACGGCTATAGAATCTATATCAAAAGCATATGGTA
ACCAGGCTGTGGTCGTGAGTGTGGATCCTAAACGTGTCTATGTGGACGGG
CCAGAAGATACCAACCATCATACAATCCGGACAAAGTACCCGAATGCTGC
TGGCCAGACGTTTTGCTGGTACCAATGCACTATCAAGGGTGGCAGAGAGT
CTCGAGACCTCGACGTCCGGCAACTAGCGAAGGCGGTTGAAGCAATGGGT
GCTGGTGAACTCTTGCTAAATTGCATCGACAAGGACGGAAGCAACAGCGG
ATTTGATCTGGAATTGATCAGTGATGTGAAAGCCGCCATTAAGATACCAG
TGATTGCCTCCAGCGGTGCTGGAAACCCCGAACATTTTGCAGAAGTCTTC
CAAAATACTACGACTGATGCCGCCCTAGGCGCTGGCATGATGGCCAGCCA
TGGTGGGGTGAAGAAGAATAATCGTCCCAAGTCAAATTGCGACTTTTTCT
ATTCTCAAGACTTTATTTTCGAAGACCTACTGCTGGGAGTGGCCGCAAAA
AGACTGGCCTTCAAACCAGCGGAGACCTATACCCCTGTTCAACATTTCCA
GAGCATTTTTGCACAAGACATTGGTAGAACACATGCCACAATGCCTACGG
TACATCTGCTAGATTACGTCGCCGGAAATGTCCGCTCCCTGGTCAATGCG
ATCAACAAAGTCGGCTATGAGGTGGAATGGATTAAGTCTCCAAGTGATCT
GAAGAATGCAGAGTTCCACCGAGGTGAATATACTGTCAGCGATGTCAAAC
GTCACTTGGACAATGGAGGATTTCTCGTCCGCAGGCCTGAAGTGGGCAAT
TAAAAGCTCATCCTACCAGGTGTCGGTCATTTCGGCCATTGCTTATCTCA
ACTTTCAGAGGGAGGCTACTTGGATCCGATCAGGCAACACATAGCTTCCG
GGAAGCCATTCATGGGAATTTGTGTTGGTCTACAATCACTTTTTGAAGGG
TCTGAGGAGGACTCAGATGTTCCGGGGCTGGGATTGATTCCGATGCGGAT
GCAGAAATTCAATCCCGACACTAAGAGTGTACCCCACATAGGCTGGAACT
CTGCTATAGACACCAAAATTGGGTCTGCGGATAGTCAGAGCTTCTACGGA
TTAGTCCCAAGCAGCAAATACTACTACGTCCACTCCTACGCAGCTCTCTA
CACCCCAGGGCTCCTTGAGAAGGATGGCTGGTCAGTCGCCACAGCTACTT
ACGGCGAAGAAGAATTTGTCGGTGCTATTGCACGAGAGAATGTCTTCGCG
ACTCAGTTCCACCCGGAGAAAAGTGGCCAGGCTGGATTACGGACTATTAG
CGCCTTCCTAAATGGTGATCGCTTTCAAATGCTTACCCCGCAAGCGTCGC
TCTCCTTGGACAAAAAAGATGGGCTGACACGTAGAATCATTGCCTGTCTT
GATGTTCGCACCAATGATTCTGGTGATCTCGTCGTCACGAAAGGGGACCA
GTATGATGTTCGTGAAAAGGACGGGGTAGATACAGGAGGCCAAGTCAGAA
ACTTAGGGAAGCCCGTGGACATGGCCAAGAAGTACTACGAACAAGGGGCT
GATGAGGTGACGTTCTTGAACATCACTTCCTTCAGAAACTGTCCTATTGC
AGATGCTCCCATGCTGGAAATCCTCAGGAGGACCTCAGAAACTGTCTTCG
TACCGCTGACTATCGGGGGCGGTATCAAGGACACTATTGACACAGATGGC
ACTCACGTCTCAGCCCTTGATGTTGCGACAATGTATTTCAAGTCTGGTGC
CGATAAAGTCAGCATCGGTTCGGATGCTGTTATCGCAGCAGAGGAGTATT
ATGAAGGGGGCGAAAAGCTGACTGGCAAGACGGCTATAGAATCTATATCA
AAAGCATATGGTAACCAGGCTGTGGTCGTGAGTGTGGATCCTAAACGTGT
CTATGTGGACGGGCCAGAAGATACCAACCATCATACAATCCGGACAAAGT
ACCCGAATGCTGCTGGCCAGACGTTTTGCTGGTACCAATGCACTATCAAG
GGTGGCAGAGAGTCTCGAGACCTCGACGTCCGGCAACTAGCGAAGGCGGT
TGAAGCAATGGGTGCTGGTGAACTCTTGCTAAATTGCATCGACAAGGACG
GAAGCAACAGCGGATTTGATCTGGAATTGATCAGTGATGTGAAAGCCGCC
ATTAAGATACCAGTGATTGCCTCCAGCGGTGCTGGAAACCCCGAACATTT
TGCAGAAGTCTTCCAAAATACTACGACTGATGCCGCCCTAGGCGCTGGCA
TGATGGCCAGCCATGGTGGGGTGAAGAAGAATAATCGTCCCAAGTCAAAT
TGCGACTTTTTCTATTCTCAAGACTTTATTTTCGAAGACCTACTGCTGGG
AGTGGCCGCAAAAAGACTGGCCTTCAAACCAGCGGAGACCTATACCCCTG
TTCAACATTTCCAGAGCATTTTTGCACAAGACATTGGTAGAACACATGCC
ACAATGCCTACGGTACATCTGCTAGATTACGTCGCCGGAAATGTCCGCTC
CCTGGTCAATGCGATCAACAAAGTCGGCTATGAGGTGGAATGGATTAAGT
CTCCAAGTGATCTGAAGAATGCAGAGTTCCACCGAGGTGAATATACTGTC
AGCGATGTCAAACGTCACTTGGACAATGGAGGATTTCTCGTCCGCAGGCC
TGAAGTGGGCAATTAAAAGCTCATCCTACCAGGTGTCGGTCATTTCGGCC
ATTGCTTATCTCAACTTTCAGAGGGAGGCTACTTGGATCCGATCAGGCAA
CACATAGCTTCCGGGAAGCCATTCATGGGAATTTGTGTTGGTCTACAATC
ACTTTTTGAAGGGTCTGAGGAGGACTCAGATGTTCCGGGGCTGGGATTGA
TTCCGATGCGGATGCAGAAATTCAATCCCGACACTAAGAGTGTACCCCAC
ATAGGCTGGAACTCTGCTATAGACACCAAAATTGGGTCTGCGGATAGTCA
GAGCTTCTACGGATTAGTCCCAAGCAGCAAATACTACTACGTCCACTCCT
ACGCAGCTCTCTACACCCCAGGGCTCCTTGAGAAGGATGGCTGGTCAGTC
GCCACAGCTACTTACGGCGAAGAAGAATTTGTCGGTGCTATTGCACGAGA
GAATGTCTTCGCGACTCAGTTCCACCCGGAGAAAAGTGGCCAGGCTGGAT
TACGGACTATTAGCGCCTTCCTAAATGGTGATCGCTTTCAAATGCTTACC
CCGCAAGCGTCGCTCTCCTTGGACAAAAAAGATGGGCTGACACGTAGAAT
CATTGCCTGTCTTGATGTTCGCACCAATGATTCTGGTGATCTCGTCGTCA
CGAAAGGGGACCAGTATGATGTTCGTGAAAAGGACGGGGTAGATACAGGA
GGCCAAGTCAGAAACTTAGGGAAGCCCGTGGACATGGCCAAGAAGTACTA
CGAACAAGGGGCTGATGAGGTGACGTTCTTGAACATCACTTCCTTCAGAA
ACTGTCCTATTGCAGATGCTCCCATGCTGGAAATCCTCAGGAGGACCTCA
GAAACTGTCTTCGTACCGCTGACTATCGGGGGCGGTATCAAGGACACTAT
TGACACAGATGGCACTCACGTCTCAGCCCTTGATGTTGCGACAATGTATT
TCAAGTCTGGTGCCGATAAAGTCAGCATCGGTTCGGATGCTGTTATCGCA
GCAGAGGAGTATTATGAAGGGGGCGAAAAGCTGACTGGCAAGACGGCTAT
AGAATCTATATCAAAAGCATATGGTAACCAGGCTGTGGTCGTGAGTGTGG
ATCCTAAACGTGTCTATGTGGACGGGCCAGAAGATACCAACCATCATACA
ATCCGGACAAAGTACCCGAATGCTGCTGGCCAGACGTTTTGCTGGTACCA
ATGCACTATCAAGGGTGGCAGAGAGTCTCGAGACCTCGACGTCCGGCAAC
TAGCGAAGGCGGTTGAAGCAATGGGTGCTGGTGAACTCTTGCTAAATTGC
ATCGACAAGGACGGAAGCAACAGCGGATTTGATCTGGAATTGATCAGTGA
TGTGAAAGCCGCCATTAAGATACCAGTGATTGCCTCCAGCGGTGCTGGAA
ACCCCGAACATTTTGCAGAAGTCTTCCAAAATACTACGACTGATGCCGCC
CTAGGCGCTGGCATGATGGCCAGCCATGGTGGGGTGAAGAAGAATAATCG
TCCCAAGTCAAATTGCGACTTTTTCTATTCTCAAGACTTTATTTTCGAAG
ACCTACTGCTGGGAGTGGCCGCAAAAAGACTGGCCTTCAAACCAGCGGAG
ACCTATACCCCTGTTCAACATTTCCAGAGCATTTTTGCACAAGACATTGG
TAGAACACATGCCACAATGCCTACGGTACATCTGCTAGATTACGTCGCCG
GAAATGTCCGCTCCCTGGTCAATGCGATCAACAAAGTCGGCTATGAGGTG
GAATGGATTAAGTCTCCAAGTGATCTGAAGAATGCAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000105histidine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016833oxo-acid-lyase activity
GO:0000107imidazoleglycerol-phosphate synthase activity
GO:0016763transferase activity, transferring pentosyl groups
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50135CAN33_50135Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50135-T1CAN33_50135-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50135-T1.cdsCAN33_50135-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50135-T1.exon3CAN33_50135-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50135-T1.exon2CAN33_50135-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50135-T1.exon1CAN33_50135-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09261NLY
NoteMEROPS:MER0065588
DBxrefInterPro:IPR011060
DBxrefInterPro:IPR006062
DBxrefInterPro:IPR004651
DBxrefInterPro:IPR017926
DBxrefInterPro:IPR029062
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR010139
DBxrefInterPro:IPR014640
DBxrefPFAM:PF01174
DBxrefPFAM:PF00977
DBxrefPFAM:PF00117
Productimidazoleglycerol phosphate synthase cyclase subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:30659..32646 -
Powered by Drupal