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CAN33_50150-T1, CAN33_50150-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50150-T1
Unique NameCAN33_50150-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:42442..43867-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50150-T1 ID=CAN33_50150-T1|Name=CAN33_50150-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1426bp|location=Sequence derived from alignment at NKJJ01000020.1:42442..43867- (Aspergillus niger FDAARGOS_311)
ATGGAACCAAGTACATCCCTGAATGACGATAGTACGAAGACTCAACCATC
CTTGGACGACCTTATCAAGCAAGCTGCCGCCAAAGATGCCATCAAGGATT
ACAACGCCGCTGCAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAG
CTTAACGGAGAATTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGG
AAAAGCCCTCTACAACGTTGCCGTCAGCAAGAGCGATGTGCTTGGGTCCA
AGGTAGCTGGAGAATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCC
GCTGCGGCAACAGCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCA
GAGCCCACCCGAGAGATCCTCAGGAGCCCAGAAGACAAATACTGGTGATG
TTCCAGCTAAGCCGTACTTCCAATTTACTGGTGACGAAAACTTTGACGAC
TCGGATTCGGAAGACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGA
AGACGACTTTGCCAATGCCTTTGAAGTTCTTGACTTGGCACGTGTACTAT
ACCACAAAAAGATGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCC
GCAGGTTTACCTCCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATAC
CTACGATTTACAAGCCGAGATCTCACTGGAGGCAGAAAGGTTCAAAGACG
CGGTGACGGACTTGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCG
ATGGAGGATCCTTCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCT
AGAATTTGGCTCCGTCAAGAATGAGAATGACAACTCCCAAGAGGACACCA
GCCCCAAAGAGCCGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAA
ATGGAAAAGGCTATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAA
GAAGTTGGTCGACGATAGTTCGTTGGATGAGGACAGGGTGACCGCTATGA
AGAGAAGAATAGCAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGG
GTAAGCAACGACCTTCTTTCCAAATCTCTTTAACGCGATCCCTTCCTACT
ATGTTTGCTTCGGCTACAGTTACTGAGAACGTTGACAGCTCGTCGATCTT
CGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGCAGACAACACGGT
GCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCCCTTCGGAGCAAA
AGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGACCTTTCTGCGTTC
ATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAAGAGTGACACTGT
AGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCGATACAAAGAGAG
CACGAGCAGGCGATGAACTTGAATGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:42442..43867-

>CAN33_50150-T1 ID=CAN33_50150-T1|Name=CAN33_50150-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2676bp|location=Sequence derived from alignment at NKJJ01000020.1:42442..43867- (Aspergillus niger FDAARGOS_311)
CTCGTCGATCTTCGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGC
AGACAACACGGTGCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCC
CTTCGGAGCAAAAGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGAC
CTTTCTGCGTTCATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAA
GAGTGACACTGTAGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCG
ATACAAAGAGAGCACGAGCAGGCGATGAACTTGAATGAATGGAACCAAGT
ACATCCCTGAATGACGATAGTACGAAGACTCAACCATCCTTGGACGACCT
TATCAAGCAAGCTGCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTG
CAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAGCTTAACGGAGAA
TTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTA
CAACGTTGCCGTCAGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAG
AATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCCGCTGCGGCAACA
GCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGA
GAGATCCTCAGGAGCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGC
CGTACTTCCAATTTACTGGTGACGAAAACTTTGACGACTCGGATTCGGAA
GACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGC
CAATGCCTTTGAAGTTCTTGACTTGGCACGTGTACTATACCACAAAAAGA
TGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCCGCAGGTTTACCT
CCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATACCTACGATTTACA
AGCCGAGATCTCACTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACT
TGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCGATGGAGGATCCT
TCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTC
CGTCAAGAATGAGAATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGC
CGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAAATGGAAAAGGCT
ATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGA
CGATAGTTCGTTGGATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAG
CAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGGCTCGTCGATCTT
CGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGCAGACAACACGGT
GCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCCCTTCGGAGCAAA
AGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGACCTTTCTGCGTTC
ATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAAGAGTGACACTGT
AGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCGATACAAAGAGAG
CACGAGCAGGCGATGAACTTGAATGAATGGAACCAAGTACATCCCTGAAT
GACGATAGTACGAAGACTCAACCATCCTTGGACGACCTTATCAAGCAAGC
TGCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTGCAGAGCTGTACT
CTGAGGCCACGGAACTTCAAGCAGAGCTTAACGGAGAATTAGCGCTCGAA
AATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTACAACGTTGCCGT
CAGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAGAATCACAGCCGA
GCAGCACGTCTATTGAGAGGCCATCCGCTGCGGCAACAGCCACAACCGCA
GGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGAGAGATCCTCAGG
AGCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGCCGTACTTCCAAT
TTACTGGTGACGAAAACTTTGACGACTCGGATTCGGAAGACGAGGCCGAC
GGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGCCAATGCCTTTGA
AGTTCTTGACTTGGCACGTGTACTATACCACAAAAAGATGACTACGATAG
AGGAAGGAATTGGCAAAGGGAAATCCGCAGGTTTACCTCCAGATCTCAAA
CACGTCAAGGAACGTCTCGCGGATACCTACGATTTACAAGCCGAGATCTC
ACTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACTTGAGGACGTCTC
TAGAATTAAGGCAGTCTCTGTTTCCGATGGAGGATCCTTCTGTTGCAGAA
TGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTCCGTCAAGAATGA
GAATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGCCGGTCGACGAGG
AAATGAGGAAAGAGGCCGCAGCTCAAATGGAAAAGGCTATTGAAAGTTGC
CGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGACGATAGTTCGTT
GGATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAGCAAATGTCAAAG
ACATTATAGCTGACATGGAGCAAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50150CAN33_50150Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50150-T1CAN33_50150-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50150-T1.cdsCAN33_50150-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50150-T1.exon2CAN33_50150-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50150-T1.exon1CAN33_50150-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019544
DBxrefPFAM:PF10516
ProductSHNi-TPR family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:42442..43867 -
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