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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:47167..50576- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50160-T1 ID=CAN33_50160-T1|Name=CAN33_50160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3410bp|location=Sequence derived from alignment at NKJJ01000020.1:47167..50576- (Aspergillus niger FDAARGOS_311)
ATGCCGGGAGTCGTCATGGACAATGCCAACATTGGCGGACTAAGACACGG
GCCAGGTAACACTTATCCTCAGGATGGACTGTCACACTCTCGGGGAGAAG
TTGCTCAGTTCAACGGCGCCAACGCACAAGATGGTCCTGTTCATGTTAAT
GGCGTCGAAAAGAACGCCAGTCAATCTCGAAGCGTTGAGGCAATTCCCTC
AAATCATGCATCAAGGGTAACCAAAGGACCGCCTGAATTGCCACATATTA
CACAAGGGTTTTTCCCTTTCGCGAAGTTGGTCAATAGGTCCGTACAGCAG
TGCTGGAACGATCTATCTGACTTAATCACTGAAATGGCGGAGATGCAGGT
GAATTCTCATGGAATTCACCCCTCGACAGCTCCAACTACCGGAAAGTCGC
CCGGAAATCAGTCCCCTGGAAACATACGAAAGAAGCTTCGAATACTAGAA
TTTTCTCACGCTAAAAGAGCCGAATTCATAAAGTTGCTCGTCCTCTCTCA
ATGGAGTCGACAAGCGGCTGATGTTAGTAAATTGATCGACATTCAGAATT
TCATTCGCACCCGGCATCAAGCTTACACGAATGCGCTGCAATGGGTCGGG
GACATGAAAAGGGACCTCGTTCAGGCGCAGGTAGCAAATCCTGATCTGAA
AACCGCACTAGAAGTCTTGTCGAGGGGCAAGGTGGCGTCCATGTCCGATG
TAAGCTTTGTTATCTTCTAAAGTGTTGACAATTTATCTAATGTTCTTTCT
GCGCCGAAATCCAGCTCGGCTACAAACCTCCACGGCGCTTGACAGTCCGA
GGAACGCTCAGGAAACTACAGAAAATCAATCGATTAATCGGTGCGCGACT
CGTGGTGCAAGATGAGATTCCTCCTCCATTCAAAAGTTACCGGGTCCATG
ACGGCCGGGTCACATTTGCCGTCCCTGGCGAATTCGAACTCGACCTTTCC
ATTGGCGAAGAGAACGAAAATTCGCAGTTTTTCTTTGTCGATATACGTTT
CCTCTTCTCTCCTTCACCACCTATACTGAAGGGCCGATTATTAAACGAGC
TCGAAATGACGATTAATGACGTCCTTCAAAATAGCGGCTTGACCGGGTGC
TTCGACCTGTTACATAACCTGGTGTTAACCAATAAAATCAACATATTATT
CAAGCAAGCTACCGAGTTGGCCAGGAGTTCTTGGTCTGACGGCTTGCGGG
TTGAGTTGTTGCACCGAACACTCGTCGTCCAGTACTGGACACTGAAGCCT
GGAACTAAAAGTTGGCTTGAGATCGGAATCAAGAGCGGCCATCGCAAGTC
AGACAGCGAAAGCCCTGGGTTACCATCTTTGAAGTTCCGCTGGGTGAGGG
ATGGGGGCGAGGTGCCATGTGAAGATATTGCTTTCGATGCAAAAAATCTC
TCTATGGAGACTGTACTGCGAAGTGTCATCGCACTGCATGTCTCCCATAC
CCTTTCTTCGGCATACTGCAAGATAAGACAAAGCTCGCTTTTCTCGACTG
GCTTCCTATCCTTGCGTGCTCACCTAACAAGAACTGAGCCCGGTGATTGC
CAACTCGATGTCCAGCTCACTGAAACTAGGCATCTTCAAGTCTCTATTGA
ACCCATGTCCGGAGTGAGTATCCTGTCAGCCAAACCGACTGTCTCGGACC
GCTTTGATATGGAGCGCAATCCTGAAAGATCCTCTGTTGAGGACATAGTC
TCCCGTGTTGCTCGAATTCGCTGCAATGCAGCCATAGAGGAAATAGAATC
CAAGGTCAAAATGCTAGGATTCGAGCCACTCAATCCGAGGGCATGGAAAC
TTGACATTCGAAGGATCTTTCCACCAAATGTTCTACGCTTCACACTCTTT
TCTCATCAGCTCTGGGGGCGAAGTTGGATCGTGGCAGCAACTAGCAGCAT
GGATGGCGATTCTTGGTGGGTCGTGCAACTTCGCCCAACGTTGCCTGCAA
AGGGTCCTCCCATCCCTCATGCAAATGGCTATGGCCAGCCTATTCTCCGT
TCCGCTCAGGTTGTCACAGATTCATTCTTCCCCGCACGCTATGATATTGA
CGATGCGTACCTCGCAAACCTTGGACACAGTCTTTCAGGAATTCTGGCTA
TCCAATCCAATGCACGCTACTTGTCGGACTTGCAGTCTATCAAGTTCCAT
CCTCCTCCGCATAAGTTAAAGATCGAACCCGATCTCCGGGTCCCAGACAT
CCTTGTCCGGTACGATGTATCGACCCTTCCCAGTGTCTTTAGGGTAGCCA
TGCCCGCAAAGGCAAAGAAGAAGAGTCTCATAAGAGATACCATTCGCCTT
GCTTTCCATGGAGTTGATCCCCGTGAGAAGTGCGCCATCATGGTAGCTTA
TGGCAACTTAGTCGACTCTACGGCTACTCTATGTCCACTTATCTCGAGCT
GGGATCGCTCACTAGTATTTCAAAAGGGAGGCACTGGCTTTGCGATGCGT
TTGCTTGCACCTGCTGGTCACCCGGTCATCGTCAGCCTTCTTGAGAATCT
TCAGAGGCTTGAGTGTGTGCTTTCAATTCTTGAAACACTGCAACGGAAGA
AGGTAGAGATTCGGACCTTCTCTTTATCGAGTATATCCTTTATTTATGGT
TCAGAGAGAGATCTTGCGGCTAGCCTCAATATACATCTGTCAAGGAACGA
ATCTCTCATGAAGCTCAGCCCTACCGACCTGGCATCTAGGCGCGAGTTCT
TATTTGGTCTGCGTTTAGGCATACAGTTCGGTCTCCAAAACCCGCACCGC
CGGATCCAGGAATCCCTTGCGTCCAGTCTGAACCGCTCTCCCACCGAGGC
GGGACTTGAGACTGTTGTTGAACTTCTCACGCTTACACTTCCCCTTATGA
GGGCTTTGGACCAGCTAATGGCCAATCCTTCACACAGCGGGCCTTTGAGA
CTGCACGTAACAGTGCGCAACGCTAAGACGTACCAACTTCACTACCCTGG
GGACGAGGCTCGATTTCAATTGGTGGCTGCTTCGCACCAGAACCGGTTGG
TTTGGGTACTCAAAGACGCGAACAGCCAAGGAAATAGTAAGAACGATGAC
AGTATCACAGCCAGACTCCGACAGACACTGTATACGTCGAAGGGCGATGG
CTGGAAAGGACTTGAAACTGGAGTCGTGGCAGAAGTCGATCAAGTCGGAA
ACCTTCTACGAGAACTTGAGAAGTGCTTTGTCGCCTCTCGGGCTGATCGG
GCTGATCCCAAACACAAGCCCACCGATTATGCCGCCAATCACACTGGATT
GAACAATCCAGAAATATCGGCATTGGCAATCAAAAAAGGAACTACAGATG
GTGCTAAACTTTCCCTCTCAGACTCGCTTACAACCCTGCCGAACGACAAA
GGCAATCTATCCCAGGCAGACACGGCAGCGCAGAAAGAGGACATCATCAT
GATCGACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:47167..50576- >CAN33_50160-T1 ID=CAN33_50160-T1|Name=CAN33_50160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6690bp|location=Sequence derived from alignment at NKJJ01000020.1:47167..50576- (Aspergillus niger FDAARGOS_311)
CTCGGCTACAAACCTCCACGGCGCTTGACAGTCCGAGGAACGCTCAGGAA
ACTACAGAAAATCAATCGATTAATCGGTGCGCGACTCGTGGTGCAAGATG
AGATTCCTCCTCCATTCAAAAGTTACCGGGTCCATGACGGCCGGGTCACA
TTTGCCGTCCCTGGCGAATTCGAACTCGACCTTTCCATTGGCGAAGAGAA
CGAAAATTCGCAGTTTTTCTTTGTCGATATACGTTTCCTCTTCTCTCCTT
CACCACCTATACTGAAGGGCCGATTATTAAACGAGCTCGAAATGACGATT
AATGACGTCCTTCAAAATAGCGGCTTGACCGGGTGCTTCGACCTGTTACA
TAACCTGGTGTTAACCAATAAAATCAACATATTATTCAAGCAAGCTACCG
AGTTGGCCAGGAGTTCTTGGTCTGACGGCTTGCGGGTTGAGTTGTTGCAC
CGAACACTCGTCGTCCAGTACTGGACACTGAAGCCTGGAACTAAAAGTTG
GCTTGAGATCGGAATCAAGAGCGGCCATCGCAAGTCAGACAGCGAAAGCC
CTGGGTTACCATCTTTGAAGTTCCGCTGGGTGAGGGATGGGGGCGAGGTG
CCATGTGAAGATATTGCTTTCGATGCAAAAAATCTCTCTATGGAGACTGT
ACTGCGAAGTGTCATCGCACTGCATGTCTCCCATACCCTTTCTTCGGCAT
ACTGCAAGATAAGACAAAGCTCGCTTTTCTCGACTGGCTTCCTATCCTTG
CGTGCTCACCTAACAAGAACTGAGCCCGGTGATTGCCAACTCGATGTCCA
GCTCACTGAAACTAGGCATCTTCAAGTCTCTATTGAACCCATGTCCGGAG
TGAGTATCCTGTCAGCCAAACCGACTGTCTCGGACCGCTTTGATATGGAG
CGCAATCCTGAAAGATCCTCTGTTGAGGACATAGTCTCCCGTGTTGCTCG
AATTCGCTGCAATGCAGCCATAGAGGAAATAGAATCCAAGGTCAAAATGC
TAGGATTCGAGCCACTCAATCCGAGGGCATGGAAACTTGACATTCGAAGG
ATCTTTCCACCAAATGTTCTACGCTTCACACTCTTTTCTCATCAGCTCTG
GGGGCGAAGTTGGATCGTGGCAGCAACTAGCAGCATGGATGGCGATTCTT
GGTGGGTCGTGCAACTTCGCCCAACGTTGCCTGCAAAGGGTCCTCCCATC
CCTCATGCAAATGGCTATGGCCAGCCTATTCTCCGTTCCGCTCAGGTTGT
CACAGATTCATTCTTCCCCGCACGCTATGATATTGACGATGCGTACCTCG
CAAACCTTGGACACAGTCTTTCAGGAATTCTGGCTATCCAATCCAATGCA
CGCTACTTGTCGGACTTGCAGTCTATCAAGTTCCATCCTCCTCCGCATAA
GTTAAAGATCGAACCCGATCTCCGGGTCCCAGACATCCTTGTCCGGTACG
ATGTATCGACCCTTCCCAGTGTCTTTAGGGTAGCCATGCCCGCAAAGGCA
AAGAAGAAGAGTCTCATAAGAGATACCATTCGCCTTGCTTTCCATGGAGT
TGATCCCCGTGAGAAGTGCGCCATCATGGTAGCTTATGGCAACTTAGTCG
ACTCTACGGCTACTCTATGTCCACTTATCTCGAGCTGGGATCGCTCACTA
GTATTTCAAAAGGGAGGCACTGGCTTTGCGATGCGTTTGCTTGCACCTGC
TGGTCACCCGGTCATCGTCAGCCTTCTTGAGAATCTTCAGAGGCTTGAGT
GTGTGCTTTCAATTCTTGAAACACTGCAACGGAAGAAGGTAGAGATTCGG
ACCTTCTCTTTATCGAGTATATCCTTTATTTATGGTTCAGAGAGAGATCT
TGCGGCTAGCCTCAATATACATCTGTCAAGGAACGAATCTCTCATGAAGC
TCAGCCCTACCGACCTGGCATCTAGGCGCGAGTTCTTATTTGGTCTGCGT
TTAGGCATACAGTTCGGTCTCCAAAACCCGCACCGCCGGATCCAGGAATC
CCTTGCGTCCAGTCTGAACCGCTCTCCCACCGAGGCGGGACTTGAGACTG
TTGTTGAACTTCTCACGCTTACACTTCCCCTTATGAGGGCTTTGGACCAG
CTAATGGCCAATCCTTCACACAGCGGGCCTTTGAGACTGCACGTAACAGT
GCGCAACGCTAAGACGTACCAACTTCACTACCCTGGGGACGAGGCTCGAT
TTCAATTGGTGGCTGCTTCGCACCAGAACCGGTTGGTTTGGGTACTCAAA
GACGCGAACAGCCAAGGAAATAGTAAGAACGATGACAGTATCACAGCCAG
ACTCCGACAGACACTGTATACGTCGAAGGGCGATGGCTGGAAAGGACTTG
AAACTGGAGTCGTGGCAGAAGTCGATCAAGTCGGAAACCTTCTACGAGAA
CTTGAGAAGTGCTTTGTCGCCTCTCGGGCTGATCGGGCTGATCCCAAACA
CAAGCCCACCGATTATGCCGCCAATCACACTGGATTGAACAATCCAGAAA
TATCGGCATTGGCAATCAAAAAAGGAACTACAGATGGTGCTAAACTTTCC
CTCTCAGACTCGCTTACAACCCTGCCGAACGACAAAGGCAATCTATCCCA
GGCAGACACGGCAGCGCAGAAAGAGGACATCATCATGATCGACTAAATGC
CGGGAGTCGTCATGGACAATGCCAACATTGGCGGACTAAGACACGGGCCA
GGTAACACTTATCCTCAGGATGGACTGTCACACTCTCGGGGAGAAGTTGC
TCAGTTCAACGGCGCCAACGCACAAGATGGTCCTGTTCATGTTAATGGCG
TCGAAAAGAACGCCAGTCAATCTCGAAGCGTTGAGGCAATTCCCTCAAAT
CATGCATCAAGGGTAACCAAAGGACCGCCTGAATTGCCACATATTACACA
AGGGTTTTTCCCTTTCGCGAAGTTGGTCAATAGGTCCGTACAGCAGTGCT
GGAACGATCTATCTGACTTAATCACTGAAATGGCGGAGATGCAGGTGAAT
TCTCATGGAATTCACCCCTCGACAGCTCCAACTACCGGAAAGTCGCCCGG
AAATCAGTCCCCTGGAAACATACGAAAGAAGCTTCGAATACTAGAATTTT
CTCACGCTAAAAGAGCCGAATTCATAAAGTTGCTCGTCCTCTCTCAATGG
AGTCGACAAGCGGCTGATGTTAGTAAATTGATCGACATTCAGAATTTCAT
TCGCACCCGGCATCAAGCTTACACGAATGCGCTGCAATGGGTCGGGGACA
TGAAAAGGGACCTCGTTCAGGCGCAGGTAGCAAATCCTGATCTGAAAACC
GCACTAGAAGTCTTGTCGAGGGGCAAGGTGGCGTCCATGTCCGATCTCGG
CTACAAACCTCCACGGCGCTTGACAGTCCGAGGAACGCTCAGGAAACTAC
AGAAAATCAATCGATTAATCGGTGCGCGACTCGTGGTGCAAGATGAGATT
CCTCCTCCATTCAAAAGTTACCGGGTCCATGACGGCCGGGTCACATTTGC
CGTCCCTGGCGAATTCGAACTCGACCTTTCCATTGGCGAAGAGAACGAAA
ATTCGCAGTTTTTCTTTGTCGATATACGTTTCCTCTTCTCTCCTTCACCA
CCTATACTGAAGGGCCGATTATTAAACGAGCTCGAAATGACGATTAATGA
CGTCCTTCAAAATAGCGGCTTGACCGGGTGCTTCGACCTGTTACATAACC
TGGTGTTAACCAATAAAATCAACATATTATTCAAGCAAGCTACCGAGTTG
GCCAGGAGTTCTTGGTCTGACGGCTTGCGGGTTGAGTTGTTGCACCGAAC
ACTCGTCGTCCAGTACTGGACACTGAAGCCTGGAACTAAAAGTTGGCTTG
AGATCGGAATCAAGAGCGGCCATCGCAAGTCAGACAGCGAAAGCCCTGGG
TTACCATCTTTGAAGTTCCGCTGGGTGAGGGATGGGGGCGAGGTGCCATG
TGAAGATATTGCTTTCGATGCAAAAAATCTCTCTATGGAGACTGTACTGC
GAAGTGTCATCGCACTGCATGTCTCCCATACCCTTTCTTCGGCATACTGC
AAGATAAGACAAAGCTCGCTTTTCTCGACTGGCTTCCTATCCTTGCGTGC
TCACCTAACAAGAACTGAGCCCGGTGATTGCCAACTCGATGTCCAGCTCA
CTGAAACTAGGCATCTTCAAGTCTCTATTGAACCCATGTCCGGAGTGAGT
ATCCTGTCAGCCAAACCGACTGTCTCGGACCGCTTTGATATGGAGCGCAA
TCCTGAAAGATCCTCTGTTGAGGACATAGTCTCCCGTGTTGCTCGAATTC
GCTGCAATGCAGCCATAGAGGAAATAGAATCCAAGGTCAAAATGCTAGGA
TTCGAGCCACTCAATCCGAGGGCATGGAAACTTGACATTCGAAGGATCTT
TCCACCAAATGTTCTACGCTTCACACTCTTTTCTCATCAGCTCTGGGGGC
GAAGTTGGATCGTGGCAGCAACTAGCAGCATGGATGGCGATTCTTGGTGG
GTCGTGCAACTTCGCCCAACGTTGCCTGCAAAGGGTCCTCCCATCCCTCA
TGCAAATGGCTATGGCCAGCCTATTCTCCGTTCCGCTCAGGTTGTCACAG
ATTCATTCTTCCCCGCACGCTATGATATTGACGATGCGTACCTCGCAAAC
CTTGGACACAGTCTTTCAGGAATTCTGGCTATCCAATCCAATGCACGCTA
CTTGTCGGACTTGCAGTCTATCAAGTTCCATCCTCCTCCGCATAAGTTAA
AGATCGAACCCGATCTCCGGGTCCCAGACATCCTTGTCCGGTACGATGTA
TCGACCCTTCCCAGTGTCTTTAGGGTAGCCATGCCCGCAAAGGCAAAGAA
GAAGAGTCTCATAAGAGATACCATTCGCCTTGCTTTCCATGGAGTTGATC
CCCGTGAGAAGTGCGCCATCATGGTAGCTTATGGCAACTTAGTCGACTCT
ACGGCTACTCTATGTCCACTTATCTCGAGCTGGGATCGCTCACTAGTATT
TCAAAAGGGAGGCACTGGCTTTGCGATGCGTTTGCTTGCACCTGCTGGTC
ACCCGGTCATCGTCAGCCTTCTTGAGAATCTTCAGAGGCTTGAGTGTGTG
CTTTCAATTCTTGAAACACTGCAACGGAAGAAGGTAGAGATTCGGACCTT
CTCTTTATCGAGTATATCCTTTATTTATGGTTCAGAGAGAGATCTTGCGG
CTAGCCTCAATATACATCTGTCAAGGAACGAATCTCTCATGAAGCTCAGC
CCTACCGACCTGGCATCTAGGCGCGAGTTCTTATTTGGTCTGCGTTTAGG
CATACAGTTCGGTCTCCAAAACCCGCACCGCCGGATCCAGGAATCCCTTG
CGTCCAGTCTGAACCGCTCTCCCACCGAGGCGGGACTTGAGACTGTTGTT
GAACTTCTCACGCTTACACTTCCCCTTATGAGGGCTTTGGACCAGCTAAT
GGCCAATCCTTCACACAGCGGGCCTTTGAGACTGCACGTAACAGTGCGCA
ACGCTAAGACGTACCAACTTCACTACCCTGGGGACGAGGCTCGATTTCAA
TTGGTGGCTGCTTCGCACCAGAACCGGTTGGTTTGGGTACTCAAAGACGC
GAACAGCCAAGGAAATAGTAAGAACGATGACAGTATCACAGCCAGACTCC
GACAGACACTGTATACGTCGAAGGGCGATGGCTGGAAAGGACTTGAAACT
GGAGTCGTGGCAGAAGTCGATCAAGTCGGAAACCTTCTACGAGAACTTGA
GAAGTGCTTTGTCGCCTCTCGGGCTGATCGGGCTGATCCCAAACACAAGC
CCACCGATTATGCCGCCAATCACACTGGATTGAACAATCCAGAAATATCG
GCATTGGCAATCAAAAAAGGAACTACAGATGGTGCTAAACTTTCCCTCTC
AGACTCGCTTACAACCCTGCCGAACGACAAAGGCAATCTATCCCAGGCAG
ACACGGCAGCGCAGAAAGAGGACATCATCATGATCGACTAAATGCCGGGA
GTCGTCATGGACAATGCCAACATTGGCGGACTAAGACACGGGCCAGGTAA
CACTTATCCTCAGGATGGACTGTCACACTCTCGGGGAGAAGTTGCTCAGT
TCAACGGCGCCAACGCACAAGATGGTCCTGTTCATGTTAATGGCGTCGAA
AAGAACGCCAGTCAATCTCGAAGCGTTGAGGCAATTCCCTCAAATCATGC
ATCAAGGGTAACCAAAGGACCGCCTGAATTGCCACATATTACACAAGGGT
TTTTCCCTTTCGCGAAGTTGGTCAATAGGTCCGTACAGCAGTGCTGGAAC
GATCTATCTGACTTAATCACTGAAATGGCGGAGATGCAGGTGAATTCTCA
TGGAATTCACCCCTCGACAGCTCCAACTACCGGAAAGTCGCCCGGAAATC
AGTCCCCTGGAAACATACGAAAGAAGCTTCGAATACTAGAATTTTCTCAC
GCTAAAAGAGCCGAATTCATAAAGTTGCTCGTCCTCTCTCAATGGAGTCG
ACAAGCGGCTGATGTTAGTAAATTGATCGACATTCAGAATTTCATTCGCA
CCCGGCATCAAGCTTACACGAATGCGCTGCAATGGGTCGGGGACATGAAA
AGGGACCTCGTTCAGGCGCAGGTAGCAAATCCTGATCTGAAAACCGCACT
AGAAGTCTTGTCGAGGGGCAAGGTGGCGTCCATGTCCGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0006357 | regulation of transcription by RNA polymerase II |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260NAN |
| DBxref | InterPro:IPR013947 |
| DBxref | PFAM:PF08638 |
| Product | mediator complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:47167..50576 - |
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