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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:57480..59035- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50175-T1 ID=CAN33_50175-T1|Name=CAN33_50175-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1556bp|location=Sequence derived from alignment at NKJJ01000020.1:57480..59035- (Aspergillus niger FDAARGOS_311)
ATGCATTATCTCCTGAGAATTCGACCTATACGAAGGATATTGTCACCCAG
GTGAGTCCATTGCATCTGTGAAGGGCTTAACCTGTCCTTCTTTTTCGCTT
CTTCATCCTTTCTCTTTCCTGGTCTATTTTACCCTCACCTCATCTTTGAG
AACTTTCAAGATCCCTTCCTAAATTCGTTTTCGCTACTTCATCCTCTGAT
TCGTCTCACTGCTTCTTCCCAATCGATTTCTCTGGCCCCATTTTCGCGAG
AGAGACTTTCTCACAATCACCTACGAAAGGCAACACACGATTGTCGGAAG
CATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACAC
CAGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTC
TTTGGTGCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCA
TCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAA
GGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCAC
AGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTC
CTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGA
TATCTACTCATGGTAAATCCCCATTGTCTCCCATTTTGGCTCTACAATTA
TTATAGCAATTGGGGCAGCTAATCTTGAATACTAGGTCCCGTCATACACC
TCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATT
ATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCC
CCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTC
TTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGC
GTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCC
GCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGA
CTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAA
CACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTT
CTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCGTAAG
TAGACCCTTGTTATCATCATTCATTGGCCATCTAATTTTGACGTTTGGTT
GTTTTGTAGTTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGC
TGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGA
GCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGT
GCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGA
GGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGT
TTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACC
AGATAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:57480..59035- >CAN33_50175-T1 ID=CAN33_50175-T1|Name=CAN33_50175-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4464bp|location=Sequence derived from alignment at NKJJ01000020.1:57480..59035- (Aspergillus niger FDAARGOS_311)
TTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTA
TGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCA
GCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAAT
AAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAG
GACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACG
ATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGGTC
CCGTCATACACCTCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATC
CTTATCATAATTATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCT
CCAACTCCTGCCCCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAA
TGACTATCCTTCTTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATAC
CCTGGGCTGAGCGTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGC
GCGCATCAAGCCGCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCA
GAAAGCCATAGACTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCC
TTGCATGGGGAACACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCA
AAGCATTATGTTCTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAG
AGGATTCAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTC
ATTCTTTGGTGCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTC
TTCATCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAAC
AAAAGGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTG
GCACAGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCG
CTTCCTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAG
AAGATATCTACTCATGATGCATTATCTCCTGAGAATTCGACCTATACGAA
GGATATTGTCACCCAGTTCGGAAACCAGCATTTCAAAAAATGTAATGAGT
GGCTTGCTGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTGACT
TCGAAGAGCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCT
CACTGGTGCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGG
AGGAAGAGGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCCGTT
GACGAGTTTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGA
AGCGACCAGATAGGTCCCGTCATACACCTCTCCACAAGGTGAAGGTGGTC
ATCGTCGGCCAAGATCCTTATCATAATTATAACCAGGCCCATGGCCTTGC
ATTCTCCGTCCGCCCTCCAACTCCTGCCCCGCCTTCCCTCGTCAACATCT
TTAACGAAATTCATAATGACTATCCTTCTTTCCAAAGACCCGCAAACAAG
GGTGGCCTTCTCATACCCTGGGCTGAGCGTGGTGTACTGATGCTCAACAC
TTGCTTGACCGTACGCGCGCATCAAGCCGCTAGCCATTCAAACAAGGGCT
GGGAACTGTTCACGCAGAAAGCCATAGACTTAGTGGCCCGAGTACGGACG
CGCGGTGTTGTTTTCCTTGCATGGGGAACACCCGCAGGGAAGCGCGTGAC
AGGCATCAATAGAGCAAAGCATTATGTTCTGCAATCGGTCCACCCAAGCC
CGCTAAGTGCGTCAAGAGGATTCAGGCCGATTCAAAGAAACCCAAGGCCA
ATGGAAGCATCACTTCATTCTTTGGTGCCCCAAGAACAAGTCCAGCGACT
CAAAGGCCACTTCGTCTTCATCGGCCTTTAATAAGCAGAAATGGGTCGAC
TCATTGACTTCAGAACAAAAGGAGCTCCTTCAACTTGAGATTGACACTCT
TGATGAGAGCTGGCTGGCACAGCTCAAGGAGGAAGTCGTCAAGCCTGAGT
TCCTGGCCCTGAAGCGCTTCCTCCAGAAGGAAAAGCAATCGGGAGCTAAA
ATCTTTCCTCCCGAAGAAGATATCTACTCATGATGCATTATCTCCTGAGA
ATTCGACCTATACGAAGGATATTGTCACCCAGTTCGGAAACCAGCATTTC
AAAAAATGTAATGAGTGGCTTGCTGAACGTTATGGTGCCGACGAAGTCAT
TGACTGGTCATTGACTTCGAAGAGCAAAACCAGCTCTCCTTTTGCCACCA
TTCAAAGCCCCGCTCTCACTGGTGCCCCGAATAAGCCTATCGCTAAAGGG
TCAGATGCTAGTTTGGAGGAAGAGGTCTCCAGGACAACAGAGCCTGCCAA
GTCCACCGAGGCCGTTGACGAGTTTGAAGACGATCTCGATGCGCTGGAAG
CCCTAGCAGCAGCAGAAGCGACCAGATAGGTCCCGTCATACACCTCTCCA
CAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATTATAACC
AGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCCCCGCCT
TCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTCTTTCCA
AAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGCGTGGTG
TACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCCGCTAGC
CATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGACTTAGT
GGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAACACCCG
CAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTTCTGCAA
TCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCAGGCCGATTCA
AAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCTTTGGTGCCCCAAG
AACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCATCGGCCTTTAATAA
GCAGAAATGGGTCGACTCATTGACTTCAGAACAAAAGGAGCTCCTTCAAC
TTGAGATTGACACTCTTGATGAGAGCTGGCTGGCACAGCTCAAGGAGGAA
GTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTCCTCCAGAAGGAAAA
GCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGATATCTACTCATGAT
GCATTATCTCCTGAGAATTCGACCTATACGAAGGATATTGTCACCCAGTT
CGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTATG
GTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCAGC
TCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAATAA
GCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAGGA
CAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACGAT
CTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGGTCCC
GTCATACACCTCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCT
TATCATAATTATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCC
AACTCCTGCCCCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATG
ACTATCCTTCTTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCC
TGGGCTGAGCGTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGC
GCATCAAGCCGCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGA
AAGCCATAGACTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTT
GCATGGGGAACACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAA
GCATTATGTTCTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAG
GATTCAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCAT
TCTTTGGTGCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTT
CATCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAA
AAGGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGC
ACAGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCT
TCCTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAA
GATATCTACTCATGATGCATTATCTCCTGAGAATTCGACCTATACGAAGG
ATATTGTCACCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds |
| GO:0004844 | uracil DNA N-glycosylase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006284 | base-excision repair |
| GO:0006281 | DNA repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264GMT |
| DBxref | InterPro:IPR018085 |
| DBxref | InterPro:IPR002043 |
| DBxref | InterPro:IPR036895 |
| DBxref | InterPro:IPR005122 |
| DBxref | PFAM:PF03167 |
| Product | uracil-DNA glycosylase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:57480..59035 - |
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