You are here

Home

CAN33_50200-T1, CAN33_50200-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50200-T1
Unique NameCAN33_50200-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:69653..71084+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50200-T1 ID=CAN33_50200-T1|Name=CAN33_50200-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1432bp|location=Sequence derived from alignment at NKJJ01000020.1:69653..71084+ (Aspergillus niger FDAARGOS_311)
ATGGCTACACAGAAAGCTGCTCAGTGGGCAGCGTCCCTAACGTATTCTTC
GCTACCTCCGGACGCCCTCCAAGCGGCCATCCGGAGCTTCTACAACTGGG
TCGGCTGCACTGTCGGGGGCAGCAATCACCCCGCTGCTTCGATTGCCCGG
AACTCTTTGTCCCGCTTTTTCGGGTCTCCAACTTCAACATTGTTAGGTAC
TAATGGGCTTCAAGCTGATGCGCAGCATGCTGCGTTGATCAATGGAATTG
CATCGCACGTCCACGATTATGATGACACGCACTTGGAGACCATCATACAC
CCTACTGGGCCTGTTGCGGCAGCTCTTCTAAGCTTTGCGCAGTCACTAGA
TCGGCCAGTATCTGGACAGGATTTCCTCGCGGCTCTCGCCGCCGGGATAG
AATTAGAATGCAAGGCTGGTCTGGCTGTCTGGCCGAGCCACTATGATGTG
GGCTGGTATGTCTGCTAGGCTTCTTGCCCTCCCGGACCCCTCACCCAAAA
CAGCGCGGTATGATGGACTGACACCGTTCTTTAGGCACATCACTAGTACC
ACTGGTTCTATTGGGGCAGCAGTGGCGGTGTGTCGCCTTCTCGGCCTGAG
TCCGGAGAAGACGGCTCATGCCATCGGTATCGCCGCCACCCAGGTGACTG
GTCTTCGTGAGATGTTTGGCTCGCACACCAAGTCCTTTCACCCTGGGCGC
GCAGCCCAAAATGGCCTTCTAGCGGCTATTCTTGCTGCAGATGGATATAC
CAGTTCTTTGCAGGCTCTGGAGGCCAAGCGGGGCTGGGTGAATGTCGTTA
GTAATGACGACAAGTTAACACAGGAAATTGACAGCCTGGAATCCGACGGA
AAGTGGGAACTTGCGAAAAATGCCTTTAAGCCGTTCCCGTGTGGTATTGT
CATACACCCGGTCATTGATGGCTGTGTTTGGCTACATGGTGAGCTGCAAC
GGCGGGGCCTCAGACTACAAGATATCAAGAGTGTTCATGTCACAGTTCAC
CCACTTGTCTTGGAGCTAACGGGGAAAACAAAACCTAAAGACGGGCTGGA
AGCCAAGTTCAGCGTATATCACGGCGGTGCGATTGGCTTGATTCACGGAA
AGGCGACACCGGCAGAGTATGAAGATAATGTTGTCACAAATCCGGAAACG
ATAGAGGTACGAGACAAGTTTGTGGCAATAGCGGCGGATAATATCCGAGC
GGATGAATGCCGGATTCTGGTTGAGTTTGAAGCCCCGGAGGTCAAGATAG
AGAAGCATGTGCACCATGCAGTTGGCAGTATCGACGCCCCCATGACGGAC
AGCCAGCTCACGGAGAAGTTCATTGGCCAGTGTAGTCCAATTCTTGGCCC
ACAACAGGCAAAGATAATCAGCGATTGGTGCTGGAGCTTGGAAACAAAGG
ATGACGTCCGGCAGATTGGACGGTTCCTATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:69653..71084+

>CAN33_50200-T1 ID=CAN33_50200-T1|Name=CAN33_50200-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2706bp|location=Sequence derived from alignment at NKJJ01000020.1:69653..71084+ (Aspergillus niger FDAARGOS_311)
ATGGCTACACAGAAAGCTGCTCAGTGGGCAGCGTCCCTAACGTATTCTTC
GCTACCTCCGGACGCCCTCCAAGCGGCCATCCGGAGCTTCTACAACTGGG
TCGGCTGCACTGTCGGGGGCAGCAATCACCCCGCTGCTTCGATTGCCCGG
AACTCTTTGTCCCGCTTTTTCGGGTCTCCAACTTCAACATTGTTAGGTAC
TAATGGGCTTCAAGCTGATGCGCAGCATGCTGCGTTGATCAATGGAATTG
CATCGCACGTCCACGATTATGATGACACGCACTTGGAGACCATCATACAC
CCTACTGGGCCTGTTGCGGCAGCTCTTCTAAGCTTTGCGCAGTCACTAGA
TCGGCCAGTATCTGGACAGGATTTCCTCGCGGCTCTCGCCGCCGGGATAG
AATTAGAATGCAAGGCTGGTCTGGCTGTCTGGCCGAGCCACTATGATGTG
GGCTGGCACATCACTAGTACCACTGGTTCTATTGGGGCAGCAGTGGCGGT
GTGTCGCCTTCTCGGCCTGAGTCCGGAGAAGACGGCTCATGCCATCGGTA
TCGCCGCCACCCAGGTGACTGGTCTTCGTGAGATGTTTGGCTCGCACACC
AAGTCCTTTCACCCTGGGCGCGCAGCCCAAAATGGCCTTCTAGCGGCTAT
TCTTGCTGCAGATGGATATACCAGTTCTTTGCAGGCTCTGGAGGCCAAGC
GGGGCTGGGTGAATGTCGTTAGTAATGACGACAAGTTAACACAGGAAATT
GACAGCCTGGAATCCGACGGAAAGTGGGAACTTGCGAAAAATGCCTTTAA
GCCGTTCCCGTGTGGTATTGTCATACACCCGGTCATTGATGGCTGTGTTT
GGCTACATGGTGAGCTGCAACGGCGGGGCCTCAGACTACAAGATATCAAG
AGTGTTCATGTCACAGTTCACCCACTTGTCTTGGAGCTAACGGGGAAAAC
AAAACCTAAAGACGGGCTGGAAGCCAAGTTCAGCGTATATCACGGCGGTG
CGATTGGCTTGATTCACGGAAAGGCGACACCGGCAGAGTATGAAGATAAT
GTTGTCACAAATCCGGAAACGATAGAGGTACGAGACAAGTTTGTGGCAAT
AGCGGCGGATAATATCCGAGCGGATGAATGCCGGATTCTGGTTGAGTTTG
AAGCCCCGGAGGTCAAGATAGAGAAGCATGTGCACCATGCAGTTGGCAGT
ATCGACGCCCCCATGACGGACAGCCAGCTCACGGAGAAGTTCATTGGCCA
GTGTAGTCCAATTCTTGGCCCACAACAGGCAAAGATAATCAGCGATTGGT
GCTGGAGCTTGGAAACAAAGGATGACGTCCGGCAGATTGGACGGTTCCTA
TAGATGGCTACACAGAAAGCTGCTCAGTGGGCAGCGTCCCTAACGTATTC
TTCGCTACCTCCGGACGCCCTCCAAGCGGCCATCCGGAGCTTCTACAACT
GGGTCGGCTGCACTGTCGGGGGCAGCAATCACCCCGCTGCTTCGATTGCC
CGGAACTCTTTGTCCCGCTTTTTCGGGTCTCCAACTTCAACATTGTTAGG
TACTAATGGGCTTCAAGCTGATGCGCAGCATGCTGCGTTGATCAATGGAA
TTGCATCGCACGTCCACGATTATGATGACACGCACTTGGAGACCATCATA
CACCCTACTGGGCCTGTTGCGGCAGCTCTTCTAAGCTTTGCGCAGTCACT
AGATCGGCCAGTATCTGGACAGGATTTCCTCGCGGCTCTCGCCGCCGGGA
TAGAATTAGAATGCAAGGCTGGTCTGGCTGTCTGGCCGAGCCACTATGAT
GTGGGCTGGCACATCACTAGTACCACTGGTTCTATTGGGGCAGCAGTGGC
GGTGTGTCGCCTTCTCGGCCTGAGTCCGGAGAAGACGGCTCATGCCATCG
GTATCGCCGCCACCCAGGTGACTGGTCTTCGTGAGATGTTTGGCTCGCAC
ACCAAGTCCTTTCACCCTGGGCGCGCAGCCCAAAATGGCCTTCTAGCGGC
TATTCTTGCTGCAGATGGATATACCAGTTCTTTGCAGGCTCTGGAGGCCA
AGCGGGGCTGGGTGAATGTCGTTAGTAATGACGACAAGTTAACACAGGAA
ATTGACAGCCTGGAATCCGACGGAAAGTGGGAACTTGCGAAAAATGCCTT
TAAGCCGTTCCCGTGTGGTATTGTCATACACCCGGTCATTGATGGCTGTG
TTTGGCTACATGGTGAGCTGCAACGGCGGGGCCTCAGACTACAAGATATC
AAGAGTGTTCATGTCACAGTTCACCCACTTGTCTTGGAGCTAACGGGGAA
AACAAAACCTAAAGACGGGCTGGAAGCCAAGTTCAGCGTATATCACGGCG
GTGCGATTGGCTTGATTCACGGAAAGGCGACACCGGCAGAGTATGAAGAT
AATGTTGTCACAAATCCGGAAACGATAGAGGTACGAGACAAGTTTGTGGC
AATAGCGGCGGATAATATCCGAGCGGATGAATGCCGGATTCTGGTTGAGT
TTGAAGCCCCGGAGGTCAAGATAGAGAAGCATGTGCACCATGCAGTTGGC
AGTATCGACGCCCCCATGACGGACAGCCAGCTCACGGAGAAGTTCATTGG
CCAGTGTAGTCCAATTCTTGGCCCACAACAGGCAAAGATAATCAGCGATT
GGTGCTGGAGCTTGGAAACAAAGGATGACGTCCGGCAGATTGGACGGTTC
CTATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50200CAN33_50200Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50200-T1.exon1CAN33_50200-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50200-T1.exon2CAN33_50200-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50200-T1.cdsCAN33_50200-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50200-T1CAN33_50200-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR042188
DBxrefPFAM:PF03972
ProductMmgE/PrpD family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:69653..71084 +
Powered by Drupal