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CAN33_50210-T1, CAN33_50210-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50210-T1
Unique NameCAN33_50210-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:75765..78007+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50210-T1 ID=CAN33_50210-T1|Name=CAN33_50210-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2243bp|location=Sequence derived from alignment at NKJJ01000020.1:75765..78007+ (Aspergillus niger FDAARGOS_311)
ATGCGGCTCATTCCTTCTTTTTCGACCCTTACGGCGCTGGGTCTCCTGGC
CACTCGAGCCCTCGCTGCCGATACCCTCAGCACCAATGGTCTGACAACTT
GTATGTCAGACTCTGCTATCCAAGTCGACAAACTATCCGTCACCTATACC
CGTTCTACTAGAGAAATCGTCTTCGATGTTTCCGGCACCAATGGGGTAGA
ACAGAATGTCACGGCAATCTTGACCATCTATGCCTACGGCAGTCAACTCT
ACTCCGAAACGTTCGACCCGTGCAGCAGCAAATACTACGTGGAGCAACTC
TGTCCCGTGGCTGCCGGTAGCTTCTCCGCGACTGGCACGCAGACCCTACC
TGAATCGATCGCTAGTGAAATCCCCTCCATCGCCTTCGCCATCCCAGACT
TGGATGGCCAAGTGAAGCTTCAATTGCTGTCCAAGACCGACAATGACGAG
CTGGCATGCATCCAATCGGAACTGACCAACGGCAATACTATGCAGATCGC
TGGTGTATCCTATGCTGCTGCTGGTGTGGCTGGTGCGGCATTGGCCGTGA
GCGGGCTGTCAGCTCTGGGTGCTGTTGGCCACCCTGGTGCCGTCTCATCT
AGTCCCAGCTTTGGTGATGTCGTGAGTTGGTTTCACACTATGGCCACTAA
TGGAATGCTCAGTGTCAGCTACCCGACGGTGTACCGCAGCTTTTCGAAGA
ACTTTGCCTTCAGCACGGGTTTGATTCCTTGGGGTCAAATGCAGGAGTCC
ATCGATAACTTCCGGAAGTCGACCGGCGGCAATCTCACCGACAACAGCTA
CCAGTATCTTCTCAATGCCACGCTCGTGTACTCTGACGGCACGAATTCTA
GCTCAAAGTCGAAGCGAGGACTGGATCTGGTCACAGGCATGGCTAACCTA
GCTGCGCGCGAGGTCTCGACTTCGTATAGCAGCAATACTACTTCGTCGTC
TAACAGCACCAGTGACGACAGCAGTAGTTTCGAACATTTCGTCTCCGGAA
TTGAGGCCTATGCCGAACAGTTGACCATCCCTCAAGCCAACACCTTCATG
ACCGTTCTGCTCATTTTCGCTATCCTAATTGCCGCTATTGCCGTTGGCAT
CTTGTTGCTCAAGGTCATCCTCGAAGTTTGGGCGCTCTACGGCTCTTTCC
CGGACAAACTCACCAACTTCCGCAAAGACTACTGGGGTCTCCTGGGTCGC
ACAATTACCAACTTGATTCTGCTGCTGTACAGCGTTTGGGTGATTTGGTG
TGTCTATCAGCTCAGCAGTGGGGATTCGTGGGCGGCGAAGCTCTTGGCTG
CTGTGGCGCTTACAGTTTTCACGGCTGTGTTATTGTACTTTGGTCTCAAG
ATCATGTTCGTGGCTCGGAAGTACAAGAAGACTGAAGGTGATGCGTCCCA
TTTGTACGACAACGATGAAACCTGGCGCAAGTACAGTCTTTTCTACGACA
ACTACAAAAAGGACTACTGGTGGGCATTCGTCCCTGCCATTGTATACATG
TTTGCCAAGGGTTGCGTCATTGCTGCTGGAGATGGTCATGGGCTTGCCCA
AAGCGCTGGCCAACTCATCGTGGAGGCTCTCATGCTCACCCTTTTGCTGT
GGAACCGTCCGTACGTTGCCAAGTCTAGCCAGTGGATCAACATTTCAGTC
CAGGTGGTTCGTGTCTTGTCAATCGCGTGTGTGTTGATCTTCGTCGACGA
GCTGGGGCTCTCGGAGACGACCAAAACTGTCACCGGCATTGTCCTCATTG
CTATTCAGTCGGGACTGAGTGGTATCTTGGCCATTCTTATTGCCACCAAC
GCCATTATCCTCTGCATTCGCGAGAACCCTCATGCTAAACGGAAGAGGGA
AGCTAGTAAGTGAATTGGCCACTGTGTTCGACACTCTTTGGGTTGCTGAC
TAGTGTGTTACCAGACAAAATGAATCGTGATCTCGATGATTTGACCCCTC
TTGACGCCCGTGAATCTCTGCTCATGGAGCATCCTCCTCGCAAGGATTAC
GCTGAAATGAGCAAGTTCAACTTTACCGGTCCTTACGAACCATACCGGGA
TCAACATGATTCGAAATCGCGACACAGCCCTACAGGTAGCACGGATCGGC
TGGTTGATTCAAGCTACCCTCTTGAAGACGTCAATGGTCGAAGTATAAGT
CGAGAAAGCCGCCGAAGCCATGACAGTCATGGCAGCCATGAAAACCCTGA
AAAGCACCATGCCACGACCCCGGGTTATGGGTTCGCTTACTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:75765..78007+

>CAN33_50210-T1 ID=CAN33_50210-T1|Name=CAN33_50210-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4368bp|location=Sequence derived from alignment at NKJJ01000020.1:75765..78007+ (Aspergillus niger FDAARGOS_311)
ATGCGGCTCATTCCTTCTTTTTCGACCCTTACGGCGCTGGGTCTCCTGGC
CACTCGAGCCCTCGCTGCCGATACCCTCAGCACCAATGGTCTGACAACTT
GTATGTCAGACTCTGCTATCCAAGTCGACAAACTATCCGTCACCTATACC
CGTTCTACTAGAGAAATCGTCTTCGATGTTTCCGGCACCAATGGGGTAGA
ACAGAATGTCACGGCAATCTTGACCATCTATGCCTACGGCAGTCAACTCT
ACTCCGAAACGTTCGACCCGTGCAGCAGCAAATACTACGTGGAGCAACTC
TGTCCCGTGGCTGCCGGTAGCTTCTCCGCGACTGGCACGCAGACCCTACC
TGAATCGATCGCTAGTGAAATCCCCTCCATCGCCTTCGCCATCCCAGACT
TGGATGGCCAAGTGAAGCTTCAATTGCTGTCCAAGACCGACAATGACGAG
CTGGCATGCATCCAATCGGAACTGACCAACGGCAATACTATGCAGATCGC
TGGTGTATCCTATGCTGCTGCTGGTGTGGCTGGTGCGGCATTGGCCGTGA
GCGGGCTGTCAGCTCTGGGTGCTGTTGGCCACCCTGGTGCCGTCTCATCT
AGTCCCAGCTTTGGTGATGTCGTGAGTTGGTTTCACACTATGGCCACTAA
TGGAATGCTCAGTGTCAGCTACCCGACGGTGTACCGCAGCTTTTCGAAGA
ACTTTGCCTTCAGCACGGGTTTGATTCCTTGGGGTCAAATGCAGGAGTCC
ATCGATAACTTCCGGAAGTCGACCGGCGGCAATCTCACCGACAACAGCTA
CCAGTATCTTCTCAATGCCACGCTCGTGTACTCTGACGGCACGAATTCTA
GCTCAAAGTCGAAGCGAGGACTGGATCTGGTCACAGGCATGGCTAACCTA
GCTGCGCGCGAGGTCTCGACTTCGTATAGCAGCAATACTACTTCGTCGTC
TAACAGCACCAGTGACGACAGCAGTAGTTTCGAACATTTCGTCTCCGGAA
TTGAGGCCTATGCCGAACAGTTGACCATCCCTCAAGCCAACACCTTCATG
ACCGTTCTGCTCATTTTCGCTATCCTAATTGCCGCTATTGCCGTTGGCAT
CTTGTTGCTCAAGGTCATCCTCGAAGTTTGGGCGCTCTACGGCTCTTTCC
CGGACAAACTCACCAACTTCCGCAAAGACTACTGGGGTCTCCTGGGTCGC
ACAATTACCAACTTGATTCTGCTGCTGTACAGCGTTTGGGTGATTTGGTG
TGTCTATCAGCTCAGCAGTGGGGATTCGTGGGCGGCGAAGCTCTTGGCTG
CTGTGGCGCTTACAGTTTTCACGGCTGTGTTATTGTACTTTGGTCTCAAG
ATCATGTTCGTGGCTCGGAAGTACAAGAAGACTGAAGGTGATGCGTCCCA
TTTGTACGACAACGATGAAACCTGGCGCAAGTACAGTCTTTTCTACGACA
ACTACAAAAAGGACTACTGGTGGGCATTCGTCCCTGCCATTGTATACATG
TTTGCCAAGGGTTGCGTCATTGCTGCTGGAGATGGTCATGGGCTTGCCCA
AAGCGCTGGCCAACTCATCGTGGAGGCTCTCATGCTCACCCTTTTGCTGT
GGAACCGTCCGTACGTTGCCAAGTCTAGCCAGTGGATCAACATTTCAGTC
CAGGTGGTTCGTGTCTTGTCAATCGCGTGTGTGTTGATCTTCGTCGACGA
GCTGGGGCTCTCGGAGACGACCAAAACTGTCACCGGCATTGTCCTCATTG
CTATTCAGTCGGGACTGAGTGGTATCTTGGCCATTCTTATTGCCACCAAC
GCCATTATCCTCTGCATTCGCGAGAACCCTCATGCTAAACGGAAGAGGGA
AGCTAACAAAATGAATCGTGATCTCGATGATTTGACCCCTCTTGACGCCC
GTGAATCTCTGCTCATGGAGCATCCTCCTCGCAAGGATTACGCTGAAATG
AGCAAGTTCAACTTTACCGGTCCTTACGAACCATACCGGGATCAACATGA
TTCGAAATCGCGACACAGCCCTACAGGTAGCACGGATCGGCTGGTTGATT
CAAGCTACCCTCTTGAAGACGTCAATGGTCGAAGTATAAGTCGAGAAAGC
CGCCGAAGCCATGACAGTCATGGCAGCCATGAAAACCCTGAAAAGCACCA
TGCCACGACCCCGGGTTATGGGTTCGCTTACTGAATGCGGCTCATTCCTT
CTTTTTCGACCCTTACGGCGCTGGGTCTCCTGGCCACTCGAGCCCTCGCT
GCCGATACCCTCAGCACCAATGGTCTGACAACTTGTATGTCAGACTCTGC
TATCCAAGTCGACAAACTATCCGTCACCTATACCCGTTCTACTAGAGAAA
TCGTCTTCGATGTTTCCGGCACCAATGGGGTAGAACAGAATGTCACGGCA
ATCTTGACCATCTATGCCTACGGCAGTCAACTCTACTCCGAAACGTTCGA
CCCGTGCAGCAGCAAATACTACGTGGAGCAACTCTGTCCCGTGGCTGCCG
GTAGCTTCTCCGCGACTGGCACGCAGACCCTACCTGAATCGATCGCTAGT
GAAATCCCCTCCATCGCCTTCGCCATCCCAGACTTGGATGGCCAAGTGAA
GCTTCAATTGCTGTCCAAGACCGACAATGACGAGCTGGCATGCATCCAAT
CGGAACTGACCAACGGCAATACTATGCAGATCGCTGGTGTATCCTATGCT
GCTGCTGGTGTGGCTGGTGCGGCATTGGCCGTGAGCGGGCTGTCAGCTCT
GGGTGCTGTTGGCCACCCTGGTGCCGTCTCATCTAGTCCCAGCTTTGGTG
ATGTCGTGAGTTGGTTTCACACTATGGCCACTAATGGAATGCTCAGTGTC
AGCTACCCGACGGTGTACCGCAGCTTTTCGAAGAACTTTGCCTTCAGCAC
GGGTTTGATTCCTTGGGGTCAAATGCAGGAGTCCATCGATAACTTCCGGA
AGTCGACCGGCGGCAATCTCACCGACAACAGCTACCAGTATCTTCTCAAT
GCCACGCTCGTGTACTCTGACGGCACGAATTCTAGCTCAAAGTCGAAGCG
AGGACTGGATCTGGTCACAGGCATGGCTAACCTAGCTGCGCGCGAGGTCT
CGACTTCGTATAGCAGCAATACTACTTCGTCGTCTAACAGCACCAGTGAC
GACAGCAGTAGTTTCGAACATTTCGTCTCCGGAATTGAGGCCTATGCCGA
ACAGTTGACCATCCCTCAAGCCAACACCTTCATGACCGTTCTGCTCATTT
TCGCTATCCTAATTGCCGCTATTGCCGTTGGCATCTTGTTGCTCAAGGTC
ATCCTCGAAGTTTGGGCGCTCTACGGCTCTTTCCCGGACAAACTCACCAA
CTTCCGCAAAGACTACTGGGGTCTCCTGGGTCGCACAATTACCAACTTGA
TTCTGCTGCTGTACAGCGTTTGGGTGATTTGGTGTGTCTATCAGCTCAGC
AGTGGGGATTCGTGGGCGGCGAAGCTCTTGGCTGCTGTGGCGCTTACAGT
TTTCACGGCTGTGTTATTGTACTTTGGTCTCAAGATCATGTTCGTGGCTC
GGAAGTACAAGAAGACTGAAGGTGATGCGTCCCATTTGTACGACAACGAT
GAAACCTGGCGCAAGTACAGTCTTTTCTACGACAACTACAAAAAGGACTA
CTGGTGGGCATTCGTCCCTGCCATTGTATACATGTTTGCCAAGGGTTGCG
TCATTGCTGCTGGAGATGGTCATGGGCTTGCCCAAAGCGCTGGCCAACTC
ATCGTGGAGGCTCTCATGCTCACCCTTTTGCTGTGGAACCGTCCGTACGT
TGCCAAGTCTAGCCAGTGGATCAACATTTCAGTCCAGGTGGTTCGTGTCT
TGTCAATCGCGTGTGTGTTGATCTTCGTCGACGAGCTGGGGCTCTCGGAG
ACGACCAAAACTGTCACCGGCATTGTCCTCATTGCTATTCAGTCGGGACT
GAGTGGTATCTTGGCCATTCTTATTGCCACCAACGCCATTATCCTCTGCA
TTCGCGAGAACCCTCATGCTAAACGGAAGAGGGAAGCTAACAAAATGAAT
CGTGATCTCGATGATTTGACCCCTCTTGACGCCCGTGAATCTCTGCTCAT
GGAGCATCCTCCTCGCAAGGATTACGCTGAAATGAGCAAGTTCAACTTTA
CCGGTCCTTACGAACCATACCGGGATCAACATGATTCGAAATCGCGACAC
AGCCCTACAGGTAGCACGGATCGGCTGGTTGATTCAAGCTACCCTCTTGA
AGACGTCAATGGTCGAAGTATAAGTCGAGAAAGCCGCCGAAGCCATGACA
GTCATGGCAGCCATGAAAACCCTGAAAAGCACCATGCCACGACCCCGGGT
TATGGGTTCGCTTACTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50210CAN33_50210Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50210-T1.exon1CAN33_50210-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50210-T1.exon2CAN33_50210-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50210-T1.cdsCAN33_50210-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50210-T1CAN33_50210-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-22)
DBxrefInterPro:IPR010308
DBxrefInterPro:IPR032800
DBxrefPFAM:PF14558
DBxrefPFAM:PF06011
ProductTransient receptor potential (TRP) ion channel family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:75765..78007 +
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