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CAN33_50220-T1, CAN33_50220-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50220-T1
Unique NameCAN33_50220-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:84332..85861+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50220-T1 ID=CAN33_50220-T1|Name=CAN33_50220-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1530bp|location=Sequence derived from alignment at NKJJ01000020.1:84332..85861+ (Aspergillus niger FDAARGOS_311)
ATGCGGAAGAAACAGTCGCAGCGAGTTGGCAGTTCTCAGCTTAAGCCTGC
TGATCCAGGTGGGGGGCTTGCTAGTACCGCCTCATCACTCGGGGTTGGCT
TGGGAACCAATCGGCAACGGGCCAATAGTTCGGATATCGCTGAGGAGCGC
GGCGTACCTATGTATCCTACGGCTGGAACTGGAGAGGGTAAGATACTGCG
ACCTCAGTATAAAGAAATCCTGAAAGGTATGATGTGTCCTTATAATGCTG
GAACGTGCTGACCTCTTTCCAGACCCCGCCAACGCCTTGAACCTCATTAA
CCACGCGCCTCCTCCCAAAAATGCATCGCCTAAAGAGATGGATATGTACA
ACAGCCGCATTTCGAGAATTAACAAGTTTAAACGTCTTCTCCAGACAAGC
ACCGTTCCTTTGTCGGAGCTGAGGAACCTGGCCTGGTCAGGGGTCCCCGA
TGAAGTTCGCGCGATGACCTGGCAACTGCTCCTTGGATACCTCCCCACAA
ATAGTGAAAGGCGCATTCCTACCCTCGAAAGAAAGCGCAAGGAATATTTG
GACGGGGTTCGACAAGCCTTTGAACGTGGGAGTGCGGCTGGTTCTGGAAA
TCCACCTTCGTCGAGCGCTGGGCGTGGCAGGGGCTTGGATGAGGCAATAT
GGCATCAAATCAGCATTGATGTTCCTCGGACTAGCCCTCACATTCAACTT
TACAGCTACGAAGCTACTCAACGATCGTTGGAAAAGATCCTCTACGTTTG
GGCTATCCGACACCCGGCGAGCGGATACGTGCAAGGTATCAATGACCTCG
TCACACCGTTCTGGCAGGTCTTTTTGGGCACGTACGTAACTGATCTCAAT
GTTGAGAGGGGCATGGATCCTGGCCAGTTGCCCAGGAGTGTGCTGGATGC
TGTGGAGGCAGATACATTTTGGTGTCTTACCAAGCTACTCGACGGTATCC
AGGACAATTATATTTATGCTCAACCGGGTATTCACCGACAAGTTAGGGCA
TTGCGTGACTTGACAATGCGCATTGACTCTACACTGGCCAAGCATTTGGA
GCAGGAGGGAGTAGAGTTCATGCAGTTCAGTTTTCGGTGGATGAACTGTC
TTCTTATGCGGGAGATGAGTGTACAGAATACTATACGGATGTGGGACACG
TATATGGTGAGGCAAACCAACTATCCCTATTGCGCCAGATGTAGATCAGG
TATACTGACCGTTCCATTAGGCAGAGGAGCAAGGTTTCTCAAGGTTTCAT
CTATACGTTTGTGCAGCCTTCCTTGTGAAATGGTCAGACCAGCTGGTGAA
GATGGATTTCCAGGTGGGTATAATTCTAAGGCTCTGGATACCGTACAGTA
AATGCTAAACGACAATAGGAGATAATGATGTTTCTGCAAGCACTTCCCAC
AAAGGATTGGACGGATAAAGATGTGGAACTCTTGCTGAGCGAAGCATTCA
TCTGGCAAAGTCTCTTCCAGGACTCAAGGGCTCATCTTCGTCCGGCTGGA
GAACGAACTCCAGAGGATGAACTGCAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:84332..85861+

>CAN33_50220-T1 ID=CAN33_50220-T1|Name=CAN33_50220-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5460bp|location=Sequence derived from alignment at NKJJ01000020.1:84332..85861+ (Aspergillus niger FDAARGOS_311)
ATGCGGAAGAAACAGTCGCAGCGAGTTGGCAGTTCTCAGCTTAAGCCTGC
TGATCCAGGTGGGGGGCTTGCTAGTACCGCCTCATCACTCGGGGTTGGCT
TGGGAACCAATCGGCAACGGGCCAATAGTTCGGATATCGCTGAGGAGCGC
GGCGTACCTATGTATCCTACGGCTGGAACTGGAGAGGGTAAGATACTGCG
ACCTCAGTATAAAGAAATCCTGAAAGACCCCGCCAACGCCTTGAACCTCA
TTAACCACGCGCCTCCTCCCAAAAATGCATCGCCTAAAGAGATGGATATG
TACAACAGCCGCATTTCGAGAATTAACAAGTTTAAACGTCTTCTCCAGAC
AAGCACCGTTCCTTTGTCGGAGCTGAGGAACCTGGCCTGGTCAGGGGTCC
CCGATGAAGTTCGCGCGATGACCTGGCAACTGCTCCTTGGATACCTCCCC
ACAAATAGTGAAAGGCGCATTCCTACCCTCGAAAGAAAGCGCAAGGAATA
TTTGGACGGGGTTCGACAAGCCTTTGAACGTGGGAGTGCGGCTGGTTCTG
GAAATCCACCTTCGTCGAGCGCTGGGCGTGGCAGGGGCTTGGATGAGGCA
ATATGGCATCAAATCAGCATTGATGTTCCTCGGACTAGCCCTCACATTCA
ACTTTACAGCTACGAAGCTACTCAACGATCGTTGGAAAAGATCCTCTACG
TTTGGGCTATCCGACACCCGGCGAGCGGATACGTGCAAGGTATCAATGAC
CTCGTCACACCGTTCTGGCAGGTCTTTTTGGGCACGTACGTAACTGATCT
CAATGTTGAGAGGGGCATGGATCCTGGCCAGTTGCCCAGGAGTGTGCTGG
ATGCTGTGGAGGCAGATACATTTTGGTGTCTTACCAAGCTACTCGACGGT
ATCCAGGACAATTATATTTATGCTCAACCGGGTATTCACCGACAAGTTAG
GGCATTGCGTGACTTGACAATGCGCATTGACTCTACACTGGCCAAGCATT
TGGAGCAGGAGGGAGTAGAGTTCATGCAGTTCAGTTTTCGGTGGATGAAC
TGTCTTCTTATGCGGGAGATGAGTGTACAGAATACTATACGGATGTGGGA
CACGTATATGGCAGAGGAGCAAGGTTTCTCAAGGTTTCATCTATACGTTT
GTGCAGCCTTCCTTGTGAAATGGTCAGACCAGCTGGTGAAGATGGATTTC
CAGGAGATAATGATGTTTCTGCAAGCACTTCCCACAAAGGATTGGACGGA
TAAAGATGTGGAACTCTTGCTGAGCGAAGCATTCATCTGGCAAAGTCTCT
TCCAGGACTCAAGGGCTCATCTTCGTCCGGCTGGAGAACGAACTCCAGAG
GATGAACTGCAGTGAATGCGGAAGAAACAGTCGCAGCGAGTTGGCAGTTC
TCAGCTTAAGCCTGCTGATCCAGGTGGGGGGCTTGCTAGTACCGCCTCAT
CACTCGGGGTTGGCTTGGGAACCAATCGGCAACGGGCCAATAGTTCGGAT
ATCGCTGAGGAGCGCGGCGTACCTATGTATCCTACGGCTGGAACTGGAGA
GGGTAAGATACTGCGACCTCAGTATAAAGAAATCCTGAAAGACCCCGCCA
ACGCCTTGAACCTCATTAACCACGCGCCTCCTCCCAAAAATGCATCGCCT
AAAGAGATGGATATGTACAACAGCCGCATTTCGAGAATTAACAAGTTTAA
ACGTCTTCTCCAGACAAGCACCGTTCCTTTGTCGGAGCTGAGGAACCTGG
CCTGGTCAGGGGTCCCCGATGAAGTTCGCGCGATGACCTGGCAACTGCTC
CTTGGATACCTCCCCACAAATAGTGAAAGGCGCATTCCTACCCTCGAAAG
AAAGCGCAAGGAATATTTGGACGGGGTTCGACAAGCCTTTGAACGTGGGA
GTGCGGCTGGTTCTGGAAATCCACCTTCGTCGAGCGCTGGGCGTGGCAGG
GGCTTGGATGAGGCAATATGGCATCAAATCAGCATTGATGTTCCTCGGAC
TAGCCCTCACATTCAACTTTACAGCTACGAAGCTACTCAACGATCGTTGG
AAAAGATCCTCTACGTTTGGGCTATCCGACACCCGGCGAGCGGATACGTG
CAAGGTATCAATGACCTCGTCACACCGTTCTGGCAGGTCTTTTTGGGCAC
GTACGTAACTGATCTCAATGTTGAGAGGGGCATGGATCCTGGCCAGTTGC
CCAGGAGTGTGCTGGATGCTGTGGAGGCAGATACATTTTGGTGTCTTACC
AAGCTACTCGACGGTATCCAGGACAATTATATTTATGCTCAACCGGGTAT
TCACCGACAAGTTAGGGCATTGCGTGACTTGACAATGCGCATTGACTCTA
CACTGGCCAAGCATTTGGAGCAGGAGGGAGTAGAGTTCATGCAGTTCAGT
TTTCGGTGGATGAACTGTCTTCTTATGCGGGAGATGAGTGTACAGAATAC
TATACGGATGTGGGACACGTATATGGCAGAGGAGCAAGGTTTCTCAAGGT
TTCATCTATACGTTTGTGCAGCCTTCCTTGTGAAATGGTCAGACCAGCTG
GTGAAGATGGATTTCCAGGAGATAATGATGTTTCTGCAAGCACTTCCCAC
AAAGGATTGGACGGATAAAGATGTGGAACTCTTGCTGAGCGAAGCATTCA
TCTGGCAAAGTCTCTTCCAGGACTCAAGGGCTCATCTTCGTCCGGCTGGA
GAACGAACTCCAGAGGATGAACTGCAGTGAATGCGGAAGAAACAGTCGCA
GCGAGTTGGCAGTTCTCAGCTTAAGCCTGCTGATCCAGGTGGGGGGCTTG
CTAGTACCGCCTCATCACTCGGGGTTGGCTTGGGAACCAATCGGCAACGG
GCCAATAGTTCGGATATCGCTGAGGAGCGCGGCGTACCTATGTATCCTAC
GGCTGGAACTGGAGAGGGTAAGATACTGCGACCTCAGTATAAAGAAATCC
TGAAAGACCCCGCCAACGCCTTGAACCTCATTAACCACGCGCCTCCTCCC
AAAAATGCATCGCCTAAAGAGATGGATATGTACAACAGCCGCATTTCGAG
AATTAACAAGTTTAAACGTCTTCTCCAGACAAGCACCGTTCCTTTGTCGG
AGCTGAGGAACCTGGCCTGGTCAGGGGTCCCCGATGAAGTTCGCGCGATG
ACCTGGCAACTGCTCCTTGGATACCTCCCCACAAATAGTGAAAGGCGCAT
TCCTACCCTCGAAAGAAAGCGCAAGGAATATTTGGACGGGGTTCGACAAG
CCTTTGAACGTGGGAGTGCGGCTGGTTCTGGAAATCCACCTTCGTCGAGC
GCTGGGCGTGGCAGGGGCTTGGATGAGGCAATATGGCATCAAATCAGCAT
TGATGTTCCTCGGACTAGCCCTCACATTCAACTTTACAGCTACGAAGCTA
CTCAACGATCGTTGGAAAAGATCCTCTACGTTTGGGCTATCCGACACCCG
GCGAGCGGATACGTGCAAGGTATCAATGACCTCGTCACACCGTTCTGGCA
GGTCTTTTTGGGCACGTACGTAACTGATCTCAATGTTGAGAGGGGCATGG
ATCCTGGCCAGTTGCCCAGGAGTGTGCTGGATGCTGTGGAGGCAGATACA
TTTTGGTGTCTTACCAAGCTACTCGACGGTATCCAGGACAATTATATTTA
TGCTCAACCGGGTATTCACCGACAAGTTAGGGCATTGCGTGACTTGACAA
TGCGCATTGACTCTACACTGGCCAAGCATTTGGAGCAGGAGGGAGTAGAG
TTCATGCAGTTCAGTTTTCGGTGGATGAACTGTCTTCTTATGCGGGAGAT
GAGTGTACAGAATACTATACGGATGTGGGACACGTATATGGCAGAGGAGC
AAGGTTTCTCAAGGTTTCATCTATACGTTTGTGCAGCCTTCCTTGTGAAA
TGGTCAGACCAGCTGGTGAAGATGGATTTCCAGGAGATAATGATGTTTCT
GCAAGCACTTCCCACAAAGGATTGGACGGATAAAGATGTGGAACTCTTGC
TGAGCGAAGCATTCATCTGGCAAAGTCTCTTCCAGGACTCAAGGGCTCAT
CTTCGTCCGGCTGGAGAACGAACTCCAGAGGATGAACTGCAGTGAATGCG
GAAGAAACAGTCGCAGCGAGTTGGCAGTTCTCAGCTTAAGCCTGCTGATC
CAGGTGGGGGGCTTGCTAGTACCGCCTCATCACTCGGGGTTGGCTTGGGA
ACCAATCGGCAACGGGCCAATAGTTCGGATATCGCTGAGGAGCGCGGCGT
ACCTATGTATCCTACGGCTGGAACTGGAGAGGGTAAGATACTGCGACCTC
AGTATAAAGAAATCCTGAAAGACCCCGCCAACGCCTTGAACCTCATTAAC
CACGCGCCTCCTCCCAAAAATGCATCGCCTAAAGAGATGGATATGTACAA
CAGCCGCATTTCGAGAATTAACAAGTTTAAACGTCTTCTCCAGACAAGCA
CCGTTCCTTTGTCGGAGCTGAGGAACCTGGCCTGGTCAGGGGTCCCCGAT
GAAGTTCGCGCGATGACCTGGCAACTGCTCCTTGGATACCTCCCCACAAA
TAGTGAAAGGCGCATTCCTACCCTCGAAAGAAAGCGCAAGGAATATTTGG
ACGGGGTTCGACAAGCCTTTGAACGTGGGAGTGCGGCTGGTTCTGGAAAT
CCACCTTCGTCGAGCGCTGGGCGTGGCAGGGGCTTGGATGAGGCAATATG
GCATCAAATCAGCATTGATGTTCCTCGGACTAGCCCTCACATTCAACTTT
ACAGCTACGAAGCTACTCAACGATCGTTGGAAAAGATCCTCTACGTTTGG
GCTATCCGACACCCGGCGAGCGGATACGTGCAAGGTATCAATGACCTCGT
CACACCGTTCTGGCAGGTCTTTTTGGGCACGTACGTAACTGATCTCAATG
TTGAGAGGGGCATGGATCCTGGCCAGTTGCCCAGGAGTGTGCTGGATGCT
GTGGAGGCAGATACATTTTGGTGTCTTACCAAGCTACTCGACGGTATCCA
GGACAATTATATTTATGCTCAACCGGGTATTCACCGACAAGTTAGGGCAT
TGCGTGACTTGACAATGCGCATTGACTCTACACTGGCCAAGCATTTGGAG
CAGGAGGGAGTAGAGTTCATGCAGTTCAGTTTTCGGTGGATGAACTGTCT
TCTTATGCGGGAGATGAGTGTACAGAATACTATACGGATGTGGGACACGT
ATATGGCAGAGGAGCAAGGTTTCTCAAGGTTTCATCTATACGTTTGTGCA
GCCTTCCTTGTGAAATGGTCAGACCAGCTGGTGAAGATGGATTTCCAGGA
GATAATGATGTTTCTGCAAGCACTTCCCACAAAGGATTGGACGGATAAAG
ATGTGGAACTCTTGCTGAGCGAAGCATTCATCTGGCAAAGTCTCTTCCAG
GACTCAAGGGCTCATCTTCGTCCGGCTGGAGAACGAACTCCAGAGGATGA
ACTGCAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50220CAN33_50220Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50220-T1.exon1CAN33_50220-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50220-T1.exon2CAN33_50220-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50220-T1.exon3CAN33_50220-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50220-T1.exon4CAN33_50220-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50220-T1.cdsCAN33_50220-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50220-T1CAN33_50220-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261YLQ
DBxrefInterPro:IPR035969
DBxrefInterPro:IPR000195
DBxrefPFAM:PF00566
ProductRab-GTPase-TBC domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:84332..85861 +
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