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CAN33_50255-T1, CAN33_50255-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50255-T1
Unique NameCAN33_50255-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:102166..104380+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50255-T1 ID=CAN33_50255-T1|Name=CAN33_50255-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2215bp|location=Sequence derived from alignment at NKJJ01000020.1:102166..104380+ (Aspergillus niger FDAARGOS_311)
ATGCGAGACTTGCTGAGATCACTCAGTGACCAGAGCAGAGGCCCCGCCAA
CGGAATCCTGGCAAAAGCTTTCCAGGACTTTGTCGTTGCCCGCGCGGAAA
CTCCTGGAATCATTACGAACTACCATGCGAAGTTGCTTGTTACCACCTGG
AAGTATCTCAGAGCCCGCGAGGGGGAACTGGAACGCATGGAATGGCAGAA
GGTCTTTTCAACCGAGAACCTCGAGAATCTTCTCTACGTCTTATCGGAAG
CAAAATGTTTGCCAGAGGCGCACGAAACCGTGCGAAAGATGGCTCGGCTA
GCCTTCTTGGAGCTCTGTGCAGACCATGGATTTGGGAACAATCACATTAG
CCGTCCTGCCCTCCTATCTTACATCTATATCCAGGCTATGCTTGGTAACC
CGGATGAAGCGCGGCATGTGGTCGAGAACTTCTGGAACCGACTGAGCAAG
ACCAGCCCTTCCCCTTGGCTCACAGTCATGAAAGGCTATGCCATCATCAA
CGACAGGAATCAACTCAGGCGTACCACGGAAAAGCTGAACGAGCACGGCA
TTGTGTTCGATCGAACTGCCCATGAAGAGCTGGTCAACATCCTCGTTGAG
CAGGATCTTCTAGCGGCATTAAAAATGGTATATGAGAGTCTCTCGCCTTC
CGGAGAAGAACCTTCTGTCCTCGCCAAGGAAGCCGTCATTCGCTATGCGA
TCATGAAGGCCGAGACAGCTTGGGCAACTTCTATCTTTGAGTCGCTTTCG
CACGCGCCAGTTGCGGAGACCATAGGTATCACGCTTCTCTGGGAAGCTGT
CCAAACCAAGAGTGCTGCTGCCGTCCAGGAGAAGGCCAGAATATTGACGG
CCGGTAACCAAGAAGTCAGCGAATCACTCACCATCACATGCGTGAACGAT
CTGATGGAATACGCCAATTCCATCAAGAATCCCGAATTGGCCACAGAGTT
CGCATCTCTGGCCTCCCAGTGGGGCCTGGAACCGGACCTGCAAACTTACC
TACTGCGACTGGAAGCGTACATTCTAGCAGGGGATGTGAAGACTGCATTG
AGCTCCATGGAAGACCTACACGACCCAGAGACCATCATGCTTGAGAACTT
GCCATTGATGAACAAGCTGATCACCGTCCTCTGCTTTTCAAGTCAGGAGG
ATGCCGTGGTGGAGAAAGTGGGCTCCCTCACTGATCCGTTGTTCGAAAAT
AACGTGCGGTTGGAGGCAGACACTCTGGCAGCGTTGACGCACATGCTATT
GTACCGTCGTGAGTGGGAGGCTGTCTCCGAGCTCCTTCGTCCCCGTCTGG
GGCTCTACGATTCAGAAGAAAGAACCAAAGTCCGCAATACTCTCACCAAC
TTCATCACTGACCTGACCCAAGAAACCGATGACGCTTGGGAAATGTACAA
CCTACTTCAACTCGCGTTTCCCGAATCCGGCGTCAGCCTGCGAACCGAGA
TCATGACCTCATTCTTCAAGCGAGACCGTAGCGACCTCGCCTTCCTAGTC
TTCGGACACATGCGACAAGCAGAAGATTTCGCACGACGACCCAAACCCGA
CACCTATGCGCGATGCTTCCAAGGCCTCGCGCGAACTCAGGACGCCAAGA
ACCTCGAACTCGTCCACAACATGCTTAAGCTCGACGTGGAAGTGGACCTC
AACACGCGTCTTCTGAACGGCCTCATGCTCGCATACGCCGCCTGCGATAT
GCCCGAAAAAGCGCTGGACGTATTCCGCGACATCCTGCAATCGGACGAAG
GCCCCTCCCACAAAACCATCACCATCTTCTTCAAGACGTGCGAAAAACAC
CACAACGGAATCCAGGAGGCCATGCGAATGATGAGCAAGGTCAAGCGCCT
CGAAATCACCGTTGATCGCCAACTATACATGGCATACGTTGAGGCCCTGG
CCGCACAGTGCGAGTTTGACCTCGCCACTGAAGCGCTAGACAAGATGCAG
GCTGAAACTGGATACCTACCGACCCGCAACTCGTACGTTCAATTCCTTTC
ACCTTTCAGGTCTATAAACATGTACTAACGTATTACGCAACGACAGGATC
GGATTACTCTACAATGCCATCCCGTATCAGTACTGGAAGGATGAAGTTGA
GAAGTGGGCCAAGAATAAATACCCCGATCTGTGGGCGCAGTTGGAACAGA
TCGAGCGGACCGAGTATGAAGAGGGGCCGAAGTTCAACATCAAGGACAAT
GAGGTTATCGTCTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:102166..104380+

>CAN33_50255-T1 ID=CAN33_50255-T1|Name=CAN33_50255-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4302bp|location=Sequence derived from alignment at NKJJ01000020.1:102166..104380+ (Aspergillus niger FDAARGOS_311)
ATGCGAGACTTGCTGAGATCACTCAGTGACCAGAGCAGAGGCCCCGCCAA
CGGAATCCTGGCAAAAGCTTTCCAGGACTTTGTCGTTGCCCGCGCGGAAA
CTCCTGGAATCATTACGAACTACCATGCGAAGTTGCTTGTTACCACCTGG
AAGTATCTCAGAGCCCGCGAGGGGGAACTGGAACGCATGGAATGGCAGAA
GGTCTTTTCAACCGAGAACCTCGAGAATCTTCTCTACGTCTTATCGGAAG
CAAAATGTTTGCCAGAGGCGCACGAAACCGTGCGAAAGATGGCTCGGCTA
GCCTTCTTGGAGCTCTGTGCAGACCATGGATTTGGGAACAATCACATTAG
CCGTCCTGCCCTCCTATCTTACATCTATATCCAGGCTATGCTTGGTAACC
CGGATGAAGCGCGGCATGTGGTCGAGAACTTCTGGAACCGACTGAGCAAG
ACCAGCCCTTCCCCTTGGCTCACAGTCATGAAAGGCTATGCCATCATCAA
CGACAGGAATCAACTCAGGCGTACCACGGAAAAGCTGAACGAGCACGGCA
TTGTGTTCGATCGAACTGCCCATGAAGAGCTGGTCAACATCCTCGTTGAG
CAGGATCTTCTAGCGGCATTAAAAATGGTATATGAGAGTCTCTCGCCTTC
CGGAGAAGAACCTTCTGTCCTCGCCAAGGAAGCCGTCATTCGCTATGCGA
TCATGAAGGCCGAGACAGCTTGGGCAACTTCTATCTTTGAGTCGCTTTCG
CACGCGCCAGTTGCGGAGACCATAGGTATCACGCTTCTCTGGGAAGCTGT
CCAAACCAAGAGTGCTGCTGCCGTCCAGGAGAAGGCCAGAATATTGACGG
CCGGTAACCAAGAAGTCAGCGAATCACTCACCATCACATGCGTGAACGAT
CTGATGGAATACGCCAATTCCATCAAGAATCCCGAATTGGCCACAGAGTT
CGCATCTCTGGCCTCCCAGTGGGGCCTGGAACCGGACCTGCAAACTTACC
TACTGCGACTGGAAGCGTACATTCTAGCAGGGGATGTGAAGACTGCATTG
AGCTCCATGGAAGACCTACACGACCCAGAGACCATCATGCTTGAGAACTT
GCCATTGATGAACAAGCTGATCACCGTCCTCTGCTTTTCAAGTCAGGAGG
ATGCCGTGGTGGAGAAAGTGGGCTCCCTCACTGATCCGTTGTTCGAAAAT
AACGTGCGGTTGGAGGCAGACACTCTGGCAGCGTTGACGCACATGCTATT
GTACCGTCGTGAGTGGGAGGCTGTCTCCGAGCTCCTTCGTCCCCGTCTGG
GGCTCTACGATTCAGAAGAAAGAACCAAAGTCCGCAATACTCTCACCAAC
TTCATCACTGACCTGACCCAAGAAACCGATGACGCTTGGGAAATGTACAA
CCTACTTCAACTCGCGTTTCCCGAATCCGGCGTCAGCCTGCGAACCGAGA
TCATGACCTCATTCTTCAAGCGAGACCGTAGCGACCTCGCCTTCCTAGTC
TTCGGACACATGCGACAAGCAGAAGATTTCGCACGACGACCCAAACCCGA
CACCTATGCGCGATGCTTCCAAGGCCTCGCGCGAACTCAGGACGCCAAGA
ACCTCGAACTCGTCCACAACATGCTTAAGCTCGACGTGGAAGTGGACCTC
AACACGCGTCTTCTGAACGGCCTCATGCTCGCATACGCCGCCTGCGATAT
GCCCGAAAAAGCGCTGGACGTATTCCGCGACATCCTGCAATCGGACGAAG
GCCCCTCCCACAAAACCATCACCATCTTCTTCAAGACGTGCGAAAAACAC
CACAACGGAATCCAGGAGGCCATGCGAATGATGAGCAAGGTCAAGCGCCT
CGAAATCACCGTTGATCGCCAACTATACATGGCATACGTTGAGGCCCTGG
CCGCACAGTGCGAGTTTGACCTCGCCACTGAAGCGCTAGACAAGATGCAG
GCTGAAACTGGATACCTACCGACCCGCAACTCGATCGGATTACTCTACAA
TGCCATCCCGTATCAGTACTGGAAGGATGAAGTTGAGAAGTGGGCCAAGA
ATAAATACCCCGATCTGTGGGCGCAGTTGGAACAGATCGAGCGGACCGAG
TATGAAGAGGGGCCGAAGTTCAACATCAAGGACAATGAGGTTATCGTCTA
GATGCGAGACTTGCTGAGATCACTCAGTGACCAGAGCAGAGGCCCCGCCA
ACGGAATCCTGGCAAAAGCTTTCCAGGACTTTGTCGTTGCCCGCGCGGAA
ACTCCTGGAATCATTACGAACTACCATGCGAAGTTGCTTGTTACCACCTG
GAAGTATCTCAGAGCCCGCGAGGGGGAACTGGAACGCATGGAATGGCAGA
AGGTCTTTTCAACCGAGAACCTCGAGAATCTTCTCTACGTCTTATCGGAA
GCAAAATGTTTGCCAGAGGCGCACGAAACCGTGCGAAAGATGGCTCGGCT
AGCCTTCTTGGAGCTCTGTGCAGACCATGGATTTGGGAACAATCACATTA
GCCGTCCTGCCCTCCTATCTTACATCTATATCCAGGCTATGCTTGGTAAC
CCGGATGAAGCGCGGCATGTGGTCGAGAACTTCTGGAACCGACTGAGCAA
GACCAGCCCTTCCCCTTGGCTCACAGTCATGAAAGGCTATGCCATCATCA
ACGACAGGAATCAACTCAGGCGTACCACGGAAAAGCTGAACGAGCACGGC
ATTGTGTTCGATCGAACTGCCCATGAAGAGCTGGTCAACATCCTCGTTGA
GCAGGATCTTCTAGCGGCATTAAAAATGGTATATGAGAGTCTCTCGCCTT
CCGGAGAAGAACCTTCTGTCCTCGCCAAGGAAGCCGTCATTCGCTATGCG
ATCATGAAGGCCGAGACAGCTTGGGCAACTTCTATCTTTGAGTCGCTTTC
GCACGCGCCAGTTGCGGAGACCATAGGTATCACGCTTCTCTGGGAAGCTG
TCCAAACCAAGAGTGCTGCTGCCGTCCAGGAGAAGGCCAGAATATTGACG
GCCGGTAACCAAGAAGTCAGCGAATCACTCACCATCACATGCGTGAACGA
TCTGATGGAATACGCCAATTCCATCAAGAATCCCGAATTGGCCACAGAGT
TCGCATCTCTGGCCTCCCAGTGGGGCCTGGAACCGGACCTGCAAACTTAC
CTACTGCGACTGGAAGCGTACATTCTAGCAGGGGATGTGAAGACTGCATT
GAGCTCCATGGAAGACCTACACGACCCAGAGACCATCATGCTTGAGAACT
TGCCATTGATGAACAAGCTGATCACCGTCCTCTGCTTTTCAAGTCAGGAG
GATGCCGTGGTGGAGAAAGTGGGCTCCCTCACTGATCCGTTGTTCGAAAA
TAACGTGCGGTTGGAGGCAGACACTCTGGCAGCGTTGACGCACATGCTAT
TGTACCGTCGTGAGTGGGAGGCTGTCTCCGAGCTCCTTCGTCCCCGTCTG
GGGCTCTACGATTCAGAAGAAAGAACCAAAGTCCGCAATACTCTCACCAA
CTTCATCACTGACCTGACCCAAGAAACCGATGACGCTTGGGAAATGTACA
ACCTACTTCAACTCGCGTTTCCCGAATCCGGCGTCAGCCTGCGAACCGAG
ATCATGACCTCATTCTTCAAGCGAGACCGTAGCGACCTCGCCTTCCTAGT
CTTCGGACACATGCGACAAGCAGAAGATTTCGCACGACGACCCAAACCCG
ACACCTATGCGCGATGCTTCCAAGGCCTCGCGCGAACTCAGGACGCCAAG
AACCTCGAACTCGTCCACAACATGCTTAAGCTCGACGTGGAAGTGGACCT
CAACACGCGTCTTCTGAACGGCCTCATGCTCGCATACGCCGCCTGCGATA
TGCCCGAAAAAGCGCTGGACGTATTCCGCGACATCCTGCAATCGGACGAA
GGCCCCTCCCACAAAACCATCACCATCTTCTTCAAGACGTGCGAAAAACA
CCACAACGGAATCCAGGAGGCCATGCGAATGATGAGCAAGGTCAAGCGCC
TCGAAATCACCGTTGATCGCCAACTATACATGGCATACGTTGAGGCCCTG
GCCGCACAGTGCGAGTTTGACCTCGCCACTGAAGCGCTAGACAAGATGCA
GGCTGAAACTGGATACCTACCGACCCGCAACTCGATCGGATTACTCTACA
ATGCCATCCCGTATCAGTACTGGAAGGATGAAGTTGAGAAGTGGGCCAAG
AATAAATACCCCGATCTGTGGGCGCAGTTGGAACAGATCGAGCGGACCGA
GTATGAAGAGGGGCCGAAGTTCAACATCAAGGACAATGAGGTTATCGTCT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50255CAN33_50255Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50255-T1.exon1CAN33_50255-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50255-T1.exon2CAN33_50255-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50255-T1.cdsCAN33_50255-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50255-T1CAN33_50255-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011990
ProductPentatricopeptide repeat domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:102166..104380 +
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