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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:161922..162411- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50350-T1 ID=CAN33_50350-T1|Name=CAN33_50350-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=490bp|location=Sequence derived from alignment at NKJJ01000020.1:161922..162411- (Aspergillus niger FDAARGOS_311)
ATGTCTGAGACTTCTGCCGGTATGCACATCCCAGGTCTCGTTTTTCTCAT
GGCCATATACTGACAATTTCTATAGCCTGGCCCCTCGCCGATGAGGCCCT
CACCCAGAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGC
TGAAGAAGGGTGCTAACGAGGGTATGTGCTTCCTCAAGAACACTCATTGT
CTGTCTGTCTGCTAACTGTCTTTGCAGCCACCAAGACTCTTAACCGTGGT
ACCTCCGAGCTCGTTATCCTCGCTGCCGACACCTCTCCCCTCGCTATCCT
CCTCCACATCCCCCTCCTTGCTGAGGACAAGAACACCCCTTATGTCTTCG
TGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTG
ATTGCGGCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGAT
CAAGACCATCAAGGACAAGGTCGAGAGACTGATGATCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:161922..162411- >CAN33_50350-T1 ID=CAN33_50350-T1|Name=CAN33_50350-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1260bp|location=Sequence derived from alignment at NKJJ01000020.1:161922..162411- (Aspergillus niger FDAARGOS_311)
GACAAGAACACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCGGCCG
TGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACCAACG
AGGCCAGTGACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGTCGAG
AGACTGATGATCTAACCACCAAGACTCTTAACCGTGGTACCTCCGAGCTC
CCTGGCCCCTCGCCGATGAGGCCCTCACCCAGAACCTCCTGGACCTTGTC
CAGCAGGCCGGTCACTACCGCCAGCTGAAGAAGGGTGCTAACGAGGATGT
CTGAGACTTCTGCCGGACAAGAACACCCCTTATGTCTTCGTGCCCAGCAA
GCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCCCCGTGATTGCGGCCA
GTATCACCACCAACGAGGCCAGTGACCTCCAGGGCCAGATCAAGACCATC
AAGGACAAGGTCGAGAGACTGATGATCTAACCACCAAGACTCTTAACCGT
GGTACCTCCGAGCTCCCTGGCCCCTCGCCGATGAGGCCCTCACCCAGAAC
CTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCGCCAGCTGAAGAAGGG
TGCTAACGAGGATGTCTGAGACTTCTGCCGGACAAGAACACCCCTTATGT
CTTCGTGCCCAGCAAGCTTGCTCTCGGCCGTGCTACCGGTGTTTCCCGCC
CCGTGATTGCGGCCAGTATCACCACCAACGAGGCCAGTGACCTCCAGGGC
CAGATCAAGACCATCAAGGACAAGGTCGAGAGACTGATGATCTAACCACC
AAGACTCTTAACCGTGGTACCTCCGAGCTCCCTGGCCCCTCGCCGATGAG
GCCCTCACCCAGAACCTCCTGGACCTTGTCCAGCAGGCCGGTCACTACCG
CCAGCTGAAGAAGGGTGCTAACGAGGATGTCTGAGACTTCTGCCGGACAA
GAACACCCCTTATGTCTTCGTGCCCAGCAAGCTTGCTCTCGGCCGTGCTA
CCGGTGTTTCCCGCCCCGTGATTGCGGCCAGTATCACCACCAACGAGGCC
AGTGACCTCCAGGGCCAGATCAAGACCATCAAGGACAAGGTCGAGAGACT
GATGATCTAACCACCAAGACTCTTAACCGTGGTACCTCCGAGCTCCCTGG
CCCCTCGCCGATGAGGCCCTCACCCAGAACCTCCTGGACCTTGTCCAGCA
GGCCGGTCACTACCGCCAGCTGAAGAAGGGTGCTAACGAGGATGTCTGAG
ACTTCTGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005730 | nucleolus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029064 |
| DBxref | InterPro:IPR004038 |
| DBxref | InterPro:IPR002415 |
| Product | RNA binding protein snu13 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:161922..162411 - |
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