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CAN33_50380-T1, CAN33_50380-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50380-T1
Unique NameCAN33_50380-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:179057..180105+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50380-T1 ID=CAN33_50380-T1|Name=CAN33_50380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1049bp|location=Sequence derived from alignment at NKJJ01000020.1:179057..180105+ (Aspergillus niger FDAARGOS_311)
ATGGCCCTCCCCACTCCCTTAATGCTGGATCCAGCCATGCTGGCGGATTC
CAGCCTGGTCCACCCCGAAGACGATGATGATTCCGAATATGAATACGAAT
ATCATCCCACCGAGACAGAAGTTCGTTCCTCACCTTGGCAAGTCTGGCTA
GCATCCTGCCTTGGTTGCGATGCTGACAAAGTCTCAAAATCTCACCATCA
CTAGACTGTCTATCTGACTCTCGATCTCACCTCCCTCCATGGTCCCATCC
GACCCCCTCGTCGCCGACAACCACAAGATCCTTCCTCCCTCCCCACCTCC
AGTCCATCCACGCCTTCCCATAGTCAATATCACGATGACCAACCCGACGC
CGCCCTCTCCAGCACCGAAGCTGATCCCAACAACCCCTCCATCGCCGACC
GTGTCCAAATCCTAGGCCTTCACACCCCCAACCCCATCATCTCCTACCAG
AATCAAATCTTCAGCGGCACCTGGGCCGACCAAATCGGTACCGAGTTACT
CATCGCCCGTCCCGAGGACTCATCCTCCTCACCACCGCACGATGCAGACC
CTTCCTCCTTCACTAGTAGTAGTAATCCAGTCCCTCCGCTCCGCCACACG
CCAAACTACGACATCCTCGCAGCCAACAGCGTGAAAATCCTCGGTCGCAA
AGCGAACCTCATATCCAGCTCATCCTCCAACGTCTACGCTGCGGATTCTG
CAGCGGCAGAACAACCCAGTGAAACCCCCACCACTGGTGTAATCCGTAAA
AGCGCCCCGCAAACCAATCAAGCACGATTTTAGACCGCCTCGCCAGCCTC
AAACGCAGCAAAGGCGAGACCGATGCTGTGCGAACAACATTTAGCACAAA
GCGGATGACGAATCTGGAGGATCGGCTACGTGGTTGGGCTCGTACCGATG
AACAGCTGGCGCAGATTCAACGGTTGAACGAGCTGGCCTTATCCGGGGAT
GCGAACGCCATGGCGGAGCTGGAGGGACTTTATTCGCGGTTGGGCGGACA
AGATGATGAGGAAGAGTTGGATGAGAATGAGGATGAGCTGGGACAATAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:179057..180105+

>CAN33_50380-T1 ID=CAN33_50380-T1|Name=CAN33_50380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2754bp|location=Sequence derived from alignment at NKJJ01000020.1:179057..180105+ (Aspergillus niger FDAARGOS_311)
ATGGCCCTCCCCACTCCCTTAATGCTGGATCCAGCCATGCTGGCGGATTC
CAGCCTGGTCCACCCCGAAGACGATGATGATTCCGAATATGAATACGAAT
ATCATCCCACCGAGACAGAAACTGTCTATCTGACTCTCGATCTCACCTCC
CTCCATGGTCCCATCCGACCCCCTCGTCGCCGACAACCACAAGATCCTTC
CTCCCTCCCCACCTCCAGTCCATCCACGCCTTCCCATAGTCAATATCACG
ATGACCAACCCGACGCCGCCCTCTCCAGCACCGAAGCTGATCCCAACAAC
CCCTCCATCGCCGACCGTGTCCAAATCCTAGGCCTTCACACCCCCAACCC
CATCATCTCCTACCAGAATCAAATCTTCAGCGGCACCTGGGCCGACCAAA
TCGGTACCGAGTTACTCATCGCCCGTCCCGAGGACTCATCCTCCTCACCA
CCGCACGATGCAGACCCTTCCTCCTTCACTAGTAGTAGTAATCCAGTCCC
TCCGCTCCGCCACACGCCAAACTACGACATCCTCGCAGCCAACAGCGTGA
AAATCCTCGGTCGCAAAGCGAACCTCATATCCAGCTCATCCTCCAACGTC
TACGCTGCGGATTCTGCAGCGGCAGAACAACCCAGTGAAACCCCCACCAC
TGACCGCCTCGCCAGCCTCAAACGCAGCAAAGGCGAGACCGATGCTGTGC
GAACAACATTTAGCACAAAGCGGATGACGAATCTGGAGGATCGGCTACGT
GGTTGGGCTCGTACCGATGAACAGCTGGCGCAGATTCAACGGTTGAACGA
GCTGGCCTTATCCGGGGATGCGAACGCCATGGCGGAGCTGGAGGGACTTT
ATTCGCGGTTGGGCGGACAAGATGATGAGGAAGAGTTGGATGAGAATGAG
GATGAGCTGGGACAATAGATGGCCCTCCCCACTCCCTTAATGCTGGATCC
AGCCATGCTGGCGGATTCCAGCCTGGTCCACCCCGAAGACGATGATGATT
CCGAATATGAATACGAATATCATCCCACCGAGACAGAAACTGTCTATCTG
ACTCTCGATCTCACCTCCCTCCATGGTCCCATCCGACCCCCTCGTCGCCG
ACAACCACAAGATCCTTCCTCCCTCCCCACCTCCAGTCCATCCACGCCTT
CCCATAGTCAATATCACGATGACCAACCCGACGCCGCCCTCTCCAGCACC
GAAGCTGATCCCAACAACCCCTCCATCGCCGACCGTGTCCAAATCCTAGG
CCTTCACACCCCCAACCCCATCATCTCCTACCAGAATCAAATCTTCAGCG
GCACCTGGGCCGACCAAATCGGTACCGAGTTACTCATCGCCCGTCCCGAG
GACTCATCCTCCTCACCACCGCACGATGCAGACCCTTCCTCCTTCACTAG
TAGTAGTAATCCAGTCCCTCCGCTCCGCCACACGCCAAACTACGACATCC
TCGCAGCCAACAGCGTGAAAATCCTCGGTCGCAAAGCGAACCTCATATCC
AGCTCATCCTCCAACGTCTACGCTGCGGATTCTGCAGCGGCAGAACAACC
CAGTGAAACCCCCACCACTGACCGCCTCGCCAGCCTCAAACGCAGCAAAG
GCGAGACCGATGCTGTGCGAACAACATTTAGCACAAAGCGGATGACGAAT
CTGGAGGATCGGCTACGTGGTTGGGCTCGTACCGATGAACAGCTGGCGCA
GATTCAACGGTTGAACGAGCTGGCCTTATCCGGGGATGCGAACGCCATGG
CGGAGCTGGAGGGACTTTATTCGCGGTTGGGCGGACAAGATGATGAGGAA
GAGTTGGATGAGAATGAGGATGAGCTGGGACAATAGATGGCCCTCCCCAC
TCCCTTAATGCTGGATCCAGCCATGCTGGCGGATTCCAGCCTGGTCCACC
CCGAAGACGATGATGATTCCGAATATGAATACGAATATCATCCCACCGAG
ACAGAAACTGTCTATCTGACTCTCGATCTCACCTCCCTCCATGGTCCCAT
CCGACCCCCTCGTCGCCGACAACCACAAGATCCTTCCTCCCTCCCCACCT
CCAGTCCATCCACGCCTTCCCATAGTCAATATCACGATGACCAACCCGAC
GCCGCCCTCTCCAGCACCGAAGCTGATCCCAACAACCCCTCCATCGCCGA
CCGTGTCCAAATCCTAGGCCTTCACACCCCCAACCCCATCATCTCCTACC
AGAATCAAATCTTCAGCGGCACCTGGGCCGACCAAATCGGTACCGAGTTA
CTCATCGCCCGTCCCGAGGACTCATCCTCCTCACCACCGCACGATGCAGA
CCCTTCCTCCTTCACTAGTAGTAGTAATCCAGTCCCTCCGCTCCGCCACA
CGCCAAACTACGACATCCTCGCAGCCAACAGCGTGAAAATCCTCGGTCGC
AAAGCGAACCTCATATCCAGCTCATCCTCCAACGTCTACGCTGCGGATTC
TGCAGCGGCAGAACAACCCAGTGAAACCCCCACCACTGACCGCCTCGCCA
GCCTCAAACGCAGCAAAGGCGAGACCGATGCTGTGCGAACAACATTTAGC
ACAAAGCGGATGACGAATCTGGAGGATCGGCTACGTGGTTGGGCTCGTAC
CGATGAACAGCTGGCGCAGATTCAACGGTTGAACGAGCTGGCCTTATCCG
GGGATGCGAACGCCATGGCGGAGCTGGAGGGACTTTATTCGCGGTTGGGC
GGACAAGATGATGAGGAAGAGTTGGATGAGAATGAGGATGAGCTGGGACA
ATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50380CAN33_50380Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50380-T1.exon1CAN33_50380-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50380-T1.exon2CAN33_50380-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50380-T1.exon3CAN33_50380-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50380-T1.cdsCAN33_50380-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50380-T1CAN33_50380-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019481
DBxrefPFAM:PF10419
ProductTFIIIC subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:179057..180105 +
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