You are here

Home

CAN33_50390-T1, CAN33_50390-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50390-T1
Unique NameCAN33_50390-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:186378..187904-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50390-T1 ID=CAN33_50390-T1|Name=CAN33_50390-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1527bp|location=Sequence derived from alignment at NKJJ01000020.1:186378..187904- (Aspergillus niger FDAARGOS_311)
ATGGCTACTGCTACCGGCGGCAGAGGTCCGTTATAGGCAACCCCCCTCCC
CTCTCCCCCGATAATGTTCCCGCGCAATGGTTTTAAGGGCAACCACAAAG
GCACACACCTTTTCTTTCTACGATCGACGCTAATACTGGTGTTGTAGCGT
CCTCTGCCTCTTCTACCGCGGCGGGGAGTCTGGTCGATGCGTCGGGATAT
AAGTATGCCGAGAAGGATATCAAGCCTGGGAAGATCAAGTTGAAGAAGTC
GGCGGCGAGTGCTGCTAAGTCTGGGAAGAAGAAGGGTGATGGTTTGTTTC
CCTGCTTCCATTCTACCCTCCCAGGGATGGGTGGTTTGGTGTCATGTCAT
GCTGATGAAGTTGTTGCGCGGTTTATAGTGCCTGAATCTCCCGGTTCCTC
GTCGCCTATATTACCCGATATCGATGAAAAAACTATGGCTGCGTTCCCGA
CGGGGAAGCCCCGCGAAGAAGATCATCTCGAGACCGTCATCTGTAAGACG
TGCAAGAGGCCGGTGTTGAAGCAAAATGCGGTGGAACATATACGTGGTTG
TATTCGCGCGAAGCAGGAGAAGGCCAGGAAGAAGAAGGAGGCGAGAGATG
CGGCGAACCGCGCAAAGGAGAAGGGGGATAAAGATGGTGATGAAGATGTG
GGTGCTGGTGAGAAGGGTGAGGGGGCTGGTGACGATTCGATGAAGGGTCA
GAAGAGTGCGAAGAAGTCCGCTGTTAAAGGGATGGCGGAGGATGGGACGA
AGAAGGGCAAGAAGCGCAAGACGGAGGCCGGGGAGGATGATAAGGACAAG
GAGCCGAAGAAGAAGAAAAAGAAGGAGGAGCCGAAACCCAAGGTGCCGAA
GCCGAAGGGTCCTGTTGATGTTGAGAAGCAGTGTGGTGTTACTTTGCCGA
ATGGTGCGCAGTGCGCTAGGTCGTTGACTTGTAAAAGTCATTCGATGGGC
GCGAAGAGAGCCGTCCCGGGGCGTTCGTTGCCGTATGATATGCTGTTGCA
GGCGTATCAAAAGAAGAACCAGGCGAGGCAGCAGAGTAAGTGGTCCCGTG
GCTTATGGAGCCCGAGTCTGGACTGGATTGGGACGGTGCTAATGCTGGTT
ATCTACAGAGGCTGCTATCGATGCGAATGCTCCGCTGCAGGATGATCTGG
ATAATAATGGGCCTGTCGACTCGGATGAAGAGAAAGACACTGTCATGGCG
GCCATCTCTCGATCTCATCCATACCCGATGGTGACTCATACGTTAATCTC
GACGAAGAAGAAGTACCAATATGTGCGGATCAAAGAGATGCTATCTCATG
CATTGGGCGGTTCCCGGGGTGGTGGGCTTTTCTCGACAGGGGATACTCTC
TCCTCTCCATTTCCGGATGGTGGCAGCCTGTTCACCCCTGTAGAGGAGGT
ATCGGTGCCCGAGCCTATGGCTGTGGATGAGCCGGAGCCGGTAGAGTCGC
AGGAGAATGCAACAGATGCTGGTGCGAAGACACCTGCACCTGAAGCCAAG
AAGGTGCCTGTGGCGGCTAGCTCGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:186378..187904-

>CAN33_50390-T1 ID=CAN33_50390-T1|Name=CAN33_50390-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5625bp|location=Sequence derived from alignment at NKJJ01000020.1:186378..187904- (Aspergillus niger FDAARGOS_311)
AGGCTGCTATCGATGCGAATGCTCCGCTGCAGGATGATCTGGATAATAAT
GGGCCTGTCGACTCGGATGAAGAGAAAGACACTGTCATGGCGGCCATCTC
TCGATCTCATCCATACCCGATGGTGACTCATACGTTAATCTCGACGAAGA
AGAAGTACCAATATGTGCGGATCAAAGAGATGCTATCTCATGCATTGGGC
GGTTCCCGGGGTGGTGGGCTTTTCTCGACAGGGGATACTCTCTCCTCTCC
ATTTCCGGATGGTGGCAGCCTGTTCACCCCTGTAGAGGAGGTATCGGTGC
CCGAGCCTATGGCTGTGGATGAGCCGGAGCCGGTAGAGTCGCAGGAGAAT
GCAACAGATGCTGGTGCGAAGACACCTGCACCTGAAGCCAAGAAGGTGCC
TGTGGCGGCTAGCTCGTAGGTGCCGAAGCCGAAGGGTCCTGTTGATGTTG
AGAAGCAGTGTGGTGTTACTTTGCCGAATGGTGCGCAGTGCGCTAGGTCG
TTGACTTGTAAAAGTCATTCGATGGGCGCGAAGAGAGCCGTCCCGGGGCG
TTCGTTGCCGTATGATATGCTGTTGCAGGCGTATCAAAAGAAGAACCAGG
CGAGGCAGCAGATGCCTGAATCTCCCGGTTCCTCGTCGCCTATATTACCC
GATATCGATGAAAAAACTATGGCTGCGTTCCCGACGGGGAAGCCCCGCGA
AGAAGATCATCTCGAGACCGTCATCTGTAAGACGTGCAAGAGGCCGGTGT
TGAAGCAAAATGCGGTGGAACATATACGTGGTTGTATTCGCGCGAAGCAG
GAGAAGGCCAGGAAGAAGAAGGAGGCGAGAGATGCGGCGAACCGCGCAAA
GGAGAAGGGGGATAAAGATGGTGATGAAGATGTGGGTGCTGGTGAGAAGG
GTGAGGGGGCTGGTGACGATTCGATGAAGGGTCAGAAGAGTGCGAAGAAG
TCCGCTCGTCCTCTGCCTCTTCTACCGCGGCGGGGAGTCTGGTCGATGCG
TCGGGATATAAGTATGCCGAGAAGGATATCAAGCCTGGGAAGATCAAGTT
GAAGAAGTCGGCGGCGAGTGCTGCTAAGTCTGGGAAGAAGAAGGGTGATG
ATGGCTACTGCTACCGGCGGCAGAGAGGCTGCTATCGATGCGAATGCTCC
GCTGCAGGATGATCTGGATAATAATGGGCCTGTCGACTCGGATGAAGAGA
AAGACACTGTCATGGCGGCCATCTCTCGATCTCATCCATACCCGATGGTG
ACTCATACGTTAATCTCGACGAAGAAGAAGTACCAATATGTGCGGATCAA
AGAGATGCTATCTCATGCATTGGGCGGTTCCCGGGGTGGTGGGCTTTTCT
CGACAGGGGATACTCTCTCCTCTCCATTTCCGGATGGTGGCAGCCTGTTC
ACCCCTGTAGAGGAGGTATCGGTGCCCGAGCCTATGGCTGTGGATGAGCC
GGAGCCGGTAGAGTCGCAGGAGAATGCAACAGATGCTGGTGCGAAGACAC
CTGCACCTGAAGCCAAGAAGGTGCCTGTGGCGGCTAGCTCGTAGGTGCCG
AAGCCGAAGGGTCCTGTTGATGTTGAGAAGCAGTGTGGTGTTACTTTGCC
GAATGGTGCGCAGTGCGCTAGGTCGTTGACTTGTAAAAGTCATTCGATGG
GCGCGAAGAGAGCCGTCCCGGGGCGTTCGTTGCCGTATGATATGCTGTTG
CAGGCGTATCAAAAGAAGAACCAGGCGAGGCAGCAGATGCCTGAATCTCC
CGGTTCCTCGTCGCCTATATTACCCGATATCGATGAAAAAACTATGGCTG
CGTTCCCGACGGGGAAGCCCCGCGAAGAAGATCATCTCGAGACCGTCATC
TGTAAGACGTGCAAGAGGCCGGTGTTGAAGCAAAATGCGGTGGAACATAT
ACGTGGTTGTATTCGCGCGAAGCAGGAGAAGGCCAGGAAGAAGAAGGAGG
CGAGAGATGCGGCGAACCGCGCAAAGGAGAAGGGGGATAAAGATGGTGAT
GAAGATGTGGGTGCTGGTGAGAAGGGTGAGGGGGCTGGTGACGATTCGAT
GAAGGGTCAGAAGAGTGCGAAGAAGTCCGCTCGTCCTCTGCCTCTTCTAC
CGCGGCGGGGAGTCTGGTCGATGCGTCGGGATATAAGTATGCCGAGAAGG
ATATCAAGCCTGGGAAGATCAAGTTGAAGAAGTCGGCGGCGAGTGCTGCT
AAGTCTGGGAAGAAGAAGGGTGATGATGGCTACTGCTACCGGCGGCAGAG
AGGCTGCTATCGATGCGAATGCTCCGCTGCAGGATGATCTGGATAATAAT
GGGCCTGTCGACTCGGATGAAGAGAAAGACACTGTCATGGCGGCCATCTC
TCGATCTCATCCATACCCGATGGTGACTCATACGTTAATCTCGACGAAGA
AGAAGTACCAATATGTGCGGATCAAAGAGATGCTATCTCATGCATTGGGC
GGTTCCCGGGGTGGTGGGCTTTTCTCGACAGGGGATACTCTCTCCTCTCC
ATTTCCGGATGGTGGCAGCCTGTTCACCCCTGTAGAGGAGGTATCGGTGC
CCGAGCCTATGGCTGTGGATGAGCCGGAGCCGGTAGAGTCGCAGGAGAAT
GCAACAGATGCTGGTGCGAAGACACCTGCACCTGAAGCCAAGAAGGTGCC
TGTGGCGGCTAGCTCGTAGGTGCCGAAGCCGAAGGGTCCTGTTGATGTTG
AGAAGCAGTGTGGTGTTACTTTGCCGAATGGTGCGCAGTGCGCTAGGTCG
TTGACTTGTAAAAGTCATTCGATGGGCGCGAAGAGAGCCGTCCCGGGGCG
TTCGTTGCCGTATGATATGCTGTTGCAGGCGTATCAAAAGAAGAACCAGG
CGAGGCAGCAGATGCCTGAATCTCCCGGTTCCTCGTCGCCTATATTACCC
GATATCGATGAAAAAACTATGGCTGCGTTCCCGACGGGGAAGCCCCGCGA
AGAAGATCATCTCGAGACCGTCATCTGTAAGACGTGCAAGAGGCCGGTGT
TGAAGCAAAATGCGGTGGAACATATACGTGGTTGTATTCGCGCGAAGCAG
GAGAAGGCCAGGAAGAAGAAGGAGGCGAGAGATGCGGCGAACCGCGCAAA
GGAGAAGGGGGATAAAGATGGTGATGAAGATGTGGGTGCTGGTGAGAAGG
GTGAGGGGGCTGGTGACGATTCGATGAAGGGTCAGAAGAGTGCGAAGAAG
TCCGCTCGTCCTCTGCCTCTTCTACCGCGGCGGGGAGTCTGGTCGATGCG
TCGGGATATAAGTATGCCGAGAAGGATATCAAGCCTGGGAAGATCAAGTT
GAAGAAGTCGGCGGCGAGTGCTGCTAAGTCTGGGAAGAAGAAGGGTGATG
ATGGCTACTGCTACCGGCGGCAGAGAGGCTGCTATCGATGCGAATGCTCC
GCTGCAGGATGATCTGGATAATAATGGGCCTGTCGACTCGGATGAAGAGA
AAGACACTGTCATGGCGGCCATCTCTCGATCTCATCCATACCCGATGGTG
ACTCATACGTTAATCTCGACGAAGAAGAAGTACCAATATGTGCGGATCAA
AGAGATGCTATCTCATGCATTGGGCGGTTCCCGGGGTGGTGGGCTTTTCT
CGACAGGGGATACTCTCTCCTCTCCATTTCCGGATGGTGGCAGCCTGTTC
ACCCCTGTAGAGGAGGTATCGGTGCCCGAGCCTATGGCTGTGGATGAGCC
GGAGCCGGTAGAGTCGCAGGAGAATGCAACAGATGCTGGTGCGAAGACAC
CTGCACCTGAAGCCAAGAAGGTGCCTGTGGCGGCTAGCTCGTAGGTGCCG
AAGCCGAAGGGTCCTGTTGATGTTGAGAAGCAGTGTGGTGTTACTTTGCC
GAATGGTGCGCAGTGCGCTAGGTCGTTGACTTGTAAAAGTCATTCGATGG
GCGCGAAGAGAGCCGTCCCGGGGCGTTCGTTGCCGTATGATATGCTGTTG
CAGGCGTATCAAAAGAAGAACCAGGCGAGGCAGCAGATGCCTGAATCTCC
CGGTTCCTCGTCGCCTATATTACCCGATATCGATGAAAAAACTATGGCTG
CGTTCCCGACGGGGAAGCCCCGCGAAGAAGATCATCTCGAGACCGTCATC
TGTAAGACGTGCAAGAGGCCGGTGTTGAAGCAAAATGCGGTGGAACATAT
ACGTGGTTGTATTCGCGCGAAGCAGGAGAAGGCCAGGAAGAAGAAGGAGG
CGAGAGATGCGGCGAACCGCGCAAAGGAGAAGGGGGATAAAGATGGTGAT
GAAGATGTGGGTGCTGGTGAGAAGGGTGAGGGGGCTGGTGACGATTCGAT
GAAGGGTCAGAAGAGTGCGAAGAAGTCCGCTCGTCCTCTGCCTCTTCTAC
CGCGGCGGGGAGTCTGGTCGATGCGTCGGGATATAAGTATGCCGAGAAGG
ATATCAAGCCTGGGAAGATCAAGTTGAAGAAGTCGGCGGCGAGTGCTGCT
AAGTCTGGGAAGAAGAAGGGTGATGATGGCTACTGCTACCGGCGGCAGAG
AGGCTGCTATCGATGCGAATGCTCCGCTGCAGGATGATCTGGATAATAAT
GGGCCTGTCGACTCGGATGAAGAGAAAGACACTGTCATGGCGGCCATCTC
TCGATCTCATCCATACCCGATGGTGACTCATACGTTAATCTCGACGAAGA
AGAAGTACCAATATGTGCGGATCAAAGAGATGCTATCTCATGCATTGGGC
GGTTCCCGGGGTGGTGGGCTTTTCTCGACAGGGGATACTCTCTCCTCTCC
ATTTCCGGATGGTGGCAGCCTGTTCACCCCTGTAGAGGAGGTATCGGTGC
CCGAGCCTATGGCTGTGGATGAGCCGGAGCCGGTAGAGTCGCAGGAGAAT
GCAACAGATGCTGGTGCGAAGACACCTGCACCTGAAGCCAAGAAGGTGCC
TGTGGCGGCTAGCTCGTAGGTGCCGAAGCCGAAGGGTCCTGTTGATGTTG
AGAAGCAGTGTGGTGTTACTTTGCCGAATGGTGCGCAGTGCGCTAGGTCG
TTGACTTGTAAAAGTCATTCGATGGGCGCGAAGAGAGCCGTCCCGGGGCG
TTCGTTGCCGTATGATATGCTGTTGCAGGCGTATCAAAAGAAGAACCAGG
CGAGGCAGCAGATGCCTGAATCTCCCGGTTCCTCGTCGCCTATATTACCC
GATATCGATGAAAAAACTATGGCTGCGTTCCCGACGGGGAAGCCCCGCGA
AGAAGATCATCTCGAGACCGTCATCTGTAAGACGTGCAAGAGGCCGGTGT
TGAAGCAAAATGCGGTGGAACATATACGTGGTTGTATTCGCGCGAAGCAG
GAGAAGGCCAGGAAGAAGAAGGAGGCGAGAGATGCGGCGAACCGCGCAAA
GGAGAAGGGGGATAAAGATGGTGATGAAGATGTGGGTGCTGGTGAGAAGG
GTGAGGGGGCTGGTGACGATTCGATGAAGGGTCAGAAGAGTGCGAAGAAG
TCCGCTCGTCCTCTGCCTCTTCTACCGCGGCGGGGAGTCTGGTCGATGCG
TCGGGATATAAGTATGCCGAGAAGGATATCAAGCCTGGGAAGATCAAGTT
GAAGAAGTCGGCGGCGAGTGCTGCTAAGTCTGGGAAGAAGAAGGGTGATG
ATGGCTACTGCTACCGGCGGCAGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50390CAN33_50390Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50390-T1CAN33_50390-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50390-T1.cdsCAN33_50390-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50390-T1.exon5CAN33_50390-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_50390-T1.exon4CAN33_50390-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_50390-T1.exon3CAN33_50390-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50390-T1.exon2CAN33_50390-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50390-T1.exon1CAN33_50390-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR013243
DBxrefPFAM:PF08313
ProductSCA7 zinc-binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:186378..187904 -
Powered by Drupal