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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:275266..276263- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50515-T1 ID=CAN33_50515-T1|Name=CAN33_50515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=998bp|location=Sequence derived from alignment at NKJJ01000020.1:275266..276263- (Aspergillus niger FDAARGOS_311)
ATGGACTTGAAAAACCTCTCCAGCAATTGGAAGAAACTCCAGGGGACGCT
GAAAAAGGAAAGCGTCTCCGCCACGAAACGGAAACCTTCAGACCGCGAGA
CGGAGAATGGTGTGGTAAAGAAACGGAAAAGAGAAACTGTCGACGGACAA
CAAAAACCTGAGCGCAAACCGGTCTCAACCAAGAGAAAGAAGATGTCTAC
GAACGGTACTGATGGCGGCGAGAATGGCACCGAGGAGCCTACAAAGAAGT
CGATCTCTCGGAGGAATTCTACGGCCGCTGTTGCGGAATCAAAGCCGAAG
ATTAATGAAGGCCGTTCACCTACGTGAGCACACCTCTTGTTGCTGTTTTG
CGAGAGTTCTTTCTCTGTAATAACTACTAACGTTCTATTAGCGCGGAGCT
AGGAAAATATGTTGCGATGGATTGCGAAATGGTGGGCGTTGGCCCCAATC
CAGATCACGACTCCGCTCTCGCGCGAGTCAGTATTGTCAACTTCAACGGC
GAACAAATATACGACTCTTACGTGAGACCCAAGGAAATGGTTACAGACTG
GCGGACGCATGTCAGCGGCATCCTTCCGAAGCATATGGTGGAGGCACGAA
CACTCGAGCAGGTGCAGAAAGACGTTATCAATATCCTCGATGGGCGAATA
CTCGTGGGACATGCGGTCAGCAACGACTTGGACGCTCTTCTTCTCAGCCA
CCCTAAGCGCGACATCAGAGACACCAGCAAACATCCCCCGTACAGAAAGA
TTGCTGGCGGCGGCTCCCCTAGGCTGAAGATGTTGGCTTCGGAGTTTCTT
GGGCTAGAAATCCAGGATGGCGCTCATTCTAGTGTGGAGGATGCTAGGGC
TACAATGCTTCTGTACCGGCGGGACAAGGACACATTCGAGCGGGAACATC
TCAAGAAGTGGCCTGTGCGAGTAGTTGTCGAAAAGAAAGACCAAGACGAT
GATCAAAAGAAAAAGAAGAAGAAGAAGAAGAAGACCCGTAAGAGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:275266..276263- >CAN33_50515-T1 ID=CAN33_50515-T1|Name=CAN33_50515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2583bp|location=Sequence derived from alignment at NKJJ01000020.1:275266..276263- (Aspergillus niger FDAARGOS_311)
AGGTGACGCGGAGCTAGGAAAATATGTTGCGATGGATTGCGAAATGGTGG
GCGTTGGCCCCAATCCAGATCACGACTCCGCTCTCGCGCGAGTCAGTATT
GTCAACTTCAACGGCGAACAAATATACGACTCTTACGTGAGACCCAAGGA
AATGGTTACAGACTGGCGGACGCATGTCAGCGGCATCCTTCCGAAGCATA
TGGTGGAGGCACGAACACTCGAGCAGGTGCAGAAAGACGTTATCAATATC
CTCGATGGGCGAATACTCGTGGGACATGCGGTCAGCAACGACTTGGACGC
TCTTCTTCTCAGCCACCCTAAGCGCGACATCAGAGACACCAGCAAACATC
CCCCGTACAGAAAGATTGCTGGCGGCGGCTCCCCTAGGCTGAAGATGTTG
GCTTCGGAGTTTCTTGGGCTAGAAATCCAGGATGGCGCTCATTCTAGTGT
GGAGGATGCTAGGGCTACAATGCTTCTGTACCGGCGGGACAAGGACACAT
TCGAGCGGGAACATCTCAAGAAGTGGCCTGTGCGAGTAATGGACTTGAAA
AACCTCTCCAGCAATTGGAAGAAACTCCAGGGGACGCTGAAAAAGGAAAG
CGTCTCCGCCACGAAACGGAAACCTTCAGACCGCGAGACGGAGAATGGTG
TGGTAAAGAAACGGAAAAGAGAAACTGTCGACGGACAACAAAAACCTGAG
CGCAAACCGGTCTCAACCAAGAGAAAGAAGATGTCTACGAACGGTACTGA
TGGCGGCGAGAATGGCACCGAGGAGCCTACAAAGAAGTCGATCTCTCGGA
GGAATTCTACGGCCGCTGTTGCGGAATCAAAGCCGAAGATTAATGAAGGC
CGTTCACCTACAGGTGACGCGGAGCTAGGAAAATATGTTGCGATGGATTG
CGAAATGGTGGGCGTTGGCCCCAATCCAGATCACGACTCCGCTCTCGCGC
GAGTCAGTATTGTCAACTTCAACGGCGAACAAATATACGACTCTTACGTG
AGACCCAAGGAAATGGTTACAGACTGGCGGACGCATGTCAGCGGCATCCT
TCCGAAGCATATGGTGGAGGCACGAACACTCGAGCAGGTGCAGAAAGACG
TTATCAATATCCTCGATGGGCGAATACTCGTGGGACATGCGGTCAGCAAC
GACTTGGACGCTCTTCTTCTCAGCCACCCTAAGCGCGACATCAGAGACAC
CAGCAAACATCCCCCGTACAGAAAGATTGCTGGCGGCGGCTCCCCTAGGC
TGAAGATGTTGGCTTCGGAGTTTCTTGGGCTAGAAATCCAGGATGGCGCT
CATTCTAGTGTGGAGGATGCTAGGGCTACAATGCTTCTGTACCGGCGGGA
CAAGGACACATTCGAGCGGGAACATCTCAAGAAGTGGCCTGTGCGAGTAA
TGGACTTGAAAAACCTCTCCAGCAATTGGAAGAAACTCCAGGGGACGCTG
AAAAAGGAAAGCGTCTCCGCCACGAAACGGAAACCTTCAGACCGCGAGAC
GGAGAATGGTGTGGTAAAGAAACGGAAAAGAGAAACTGTCGACGGACAAC
AAAAACCTGAGCGCAAACCGGTCTCAACCAAGAGAAAGAAGATGTCTACG
AACGGTACTGATGGCGGCGAGAATGGCACCGAGGAGCCTACAAAGAAGTC
GATCTCTCGGAGGAATTCTACGGCCGCTGTTGCGGAATCAAAGCCGAAGA
TTAATGAAGGCCGTTCACCTACAGGTGACGCGGAGCTAGGAAAATATGTT
GCGATGGATTGCGAAATGGTGGGCGTTGGCCCCAATCCAGATCACGACTC
CGCTCTCGCGCGAGTCAGTATTGTCAACTTCAACGGCGAACAAATATACG
ACTCTTACGTGAGACCCAAGGAAATGGTTACAGACTGGCGGACGCATGTC
AGCGGCATCCTTCCGAAGCATATGGTGGAGGCACGAACACTCGAGCAGGT
GCAGAAAGACGTTATCAATATCCTCGATGGGCGAATACTCGTGGGACATG
CGGTCAGCAACGACTTGGACGCTCTTCTTCTCAGCCACCCTAAGCGCGAC
ATCAGAGACACCAGCAAACATCCCCCGTACAGAAAGATTGCTGGCGGCGG
CTCCCCTAGGCTGAAGATGTTGGCTTCGGAGTTTCTTGGGCTAGAAATCC
AGGATGGCGCTCATTCTAGTGTGGAGGATGCTAGGGCTACAATGCTTCTG
TACCGGCGGGACAAGGACACATTCGAGCGGGAACATCTCAAGAAGTGGCC
TGTGCGAGTAATGGACTTGAAAAACCTCTCCAGCAATTGGAAGAAACTCC
AGGGGACGCTGAAAAAGGAAAGCGTCTCCGCCACGAAACGGAAACCTTCA
GACCGCGAGACGGAGAATGGTGTGGTAAAGAAACGGAAAAGAGAAACTGT
CGACGGACAACAAAAACCTGAGCGCAAACCGGTCTCAACCAAGAGAAAGA
AGATGTCTACGAACGGTACTGATGGCGGCGAGAATGGCACCGAGGAGCCT
ACAAAGAAGTCGATCTCTCGGAGGAATTCTACGGCCGCTGTTGCGGAATC
AAAGCCGAAGATTAATGAAGGCCGTTCACCTAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008408 | 3'-5' exonuclease activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092646PE |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR037431 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR013520 |
| DBxref | PFAM:PF00929 |
| Product | 3'-5' exonuclease |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:275266..276263 - |
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