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CAN33_50540-T1, CAN33_50540-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50540-T1
Unique NameCAN33_50540-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:291231..292085-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50540-T1 ID=CAN33_50540-T1|Name=CAN33_50540-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=855bp|location=Sequence derived from alignment at NKJJ01000020.1:291231..292085- (Aspergillus niger FDAARGOS_311)
ATGGGTCACTCGCACGGTTTGAGAGCCGGTACTCGGGTATGTCGATTTTA
CCCAGGAATTTTTGCAGCACCTTTTCGCTGGTCCGAGACGCGAGCGCTGA
CGAACTTTTCAGTATGCCTTCAGCCGTAACTTCAAGGAGAACGGCCAGAT
CCGCCTGTCGACCTACCTGAAGACCTACCGGTACGCCGAAAATTCTCGCC
GATTTGGATAATATTTGCGTCAAGGAGCAGGATCTGATATTTTTTCATAG
GGTTGGCGACATTGTCGATATCAAGGTCAACGGTGCCGTTCAGAAGGGGT
CAGTACAAATTCCGCCCGGTGCAATAATGGGGATTCCGACATGAAGGGTT
TTGCGTGTTGGGATTCTCGAAATTTTGAGCGAAGAATTGGTTTGCTGAGA
CATTTGGAAATAGTATGCCCTACAAGGTCTACAACGGTAAGACCGGTGTC
GTCTACAACGTGACCAAGTCCTCCGTCGGTGTCCTCCTCTACAAGGTCGT
CCGCAACCGCTACCTCGAGAAGCGCATCAACGTCCGCATCGAGCACGTCA
AGCACTCCCGCTCCCGCGAGGACTTCATCAAGCGTGTCAAGGAGAACGCC
CAGAAGAAGCGCCAGGCCAAGGAGCAGGGTGTCCACCTCCACTTGAAGCG
TCAGCCCGCCATGCCCCGTGAGGCTCACCTCGTCGAGGGTACCGCTGCCG
AGACCATCACCCCATCCCCTACGACACCCACATCTAAACGAATCAAAAAC
GGTCGATGCGGTTGTTTGGTGTTTCTGGGTTTTTCAAACTTAGGGTGGGC
CTTTGCAATGAGACGAAGCGAAACAGAGGGTTCCCAGATGTTCTATCACA
TCTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:291231..292085-

>CAN33_50540-T1 ID=CAN33_50540-T1|Name=CAN33_50540-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2376bp|location=Sequence derived from alignment at NKJJ01000020.1:291231..292085- (Aspergillus niger FDAARGOS_311)
TATGCCCTACAAGGTCTACAACGGTAAGACCGGTGTCGTCTACAACGTGA
CCAAGTCCTCCGTCGGTGTCCTCCTCTACAAGGTCGTCCGCAACCGCTAC
CTCGAGAAGCGCATCAACGTCCGCATCGAGCACGTCAAGCACTCCCGCTC
CCGCGAGGACTTCATCAAGCGTGTCAAGGAGAACGCCCAGAAGAAGCGCC
AGGCCAAGGAGCAGGGTGTCCACCTCCACTTGAAGCGTCAGCCCGCCATG
CCCCGTGAGGCTCACCTCGTCGAGGGTACCGCTGCCGAGACCATCACCCC
ATCCCCTACGACACCCACATCTAAACGAATCAAAAACGGTCGATGCGGTT
GTTTGGTGTTTCTGGGTTTTTCAAACTTAGGGTGGGCCTTTGCAATGAGA
CGAAGCGAAACAGAGGGTTCCCAGATGTTCTATCACATCTAAGGTTGGCG
ACATTGTCGATATCAAGGTCAACGGTGCCGTTCAGAAGGGTATGCCTTCA
GCCGTAACTTCAAGGAGAACGGCCAGATCCGCCTGTCGACCTACCTGAAG
ACCTACCGATGGGTCACTCGCACGGTTTGAGAGCCGGTACTCGGTATGCC
CTACAAGGTCTACAACGGTAAGACCGGTGTCGTCTACAACGTGACCAAGT
CCTCCGTCGGTGTCCTCCTCTACAAGGTCGTCCGCAACCGCTACCTCGAG
AAGCGCATCAACGTCCGCATCGAGCACGTCAAGCACTCCCGCTCCCGCGA
GGACTTCATCAAGCGTGTCAAGGAGAACGCCCAGAAGAAGCGCCAGGCCA
AGGAGCAGGGTGTCCACCTCCACTTGAAGCGTCAGCCCGCCATGCCCCGT
GAGGCTCACCTCGTCGAGGGTACCGCTGCCGAGACCATCACCCCATCCCC
TACGACACCCACATCTAAACGAATCAAAAACGGTCGATGCGGTTGTTTGG
TGTTTCTGGGTTTTTCAAACTTAGGGTGGGCCTTTGCAATGAGACGAAGC
GAAACAGAGGGTTCCCAGATGTTCTATCACATCTAAGGTTGGCGACATTG
TCGATATCAAGGTCAACGGTGCCGTTCAGAAGGGTATGCCTTCAGCCGTA
ACTTCAAGGAGAACGGCCAGATCCGCCTGTCGACCTACCTGAAGACCTAC
CGATGGGTCACTCGCACGGTTTGAGAGCCGGTACTCGGTATGCCCTACAA
GGTCTACAACGGTAAGACCGGTGTCGTCTACAACGTGACCAAGTCCTCCG
TCGGTGTCCTCCTCTACAAGGTCGTCCGCAACCGCTACCTCGAGAAGCGC
ATCAACGTCCGCATCGAGCACGTCAAGCACTCCCGCTCCCGCGAGGACTT
CATCAAGCGTGTCAAGGAGAACGCCCAGAAGAAGCGCCAGGCCAAGGAGC
AGGGTGTCCACCTCCACTTGAAGCGTCAGCCCGCCATGCCCCGTGAGGCT
CACCTCGTCGAGGGTACCGCTGCCGAGACCATCACCCCATCCCCTACGAC
ACCCACATCTAAACGAATCAAAAACGGTCGATGCGGTTGTTTGGTGTTTC
TGGGTTTTTCAAACTTAGGGTGGGCCTTTGCAATGAGACGAAGCGAAACA
GAGGGTTCCCAGATGTTCTATCACATCTAAGGTTGGCGACATTGTCGATA
TCAAGGTCAACGGTGCCGTTCAGAAGGGTATGCCTTCAGCCGTAACTTCA
AGGAGAACGGCCAGATCCGCCTGTCGACCTACCTGAAGACCTACCGATGG
GTCACTCGCACGGTTTGAGAGCCGGTACTCGGTATGCCCTACAAGGTCTA
CAACGGTAAGACCGGTGTCGTCTACAACGTGACCAAGTCCTCCGTCGGTG
TCCTCCTCTACAAGGTCGTCCGCAACCGCTACCTCGAGAAGCGCATCAAC
GTCCGCATCGAGCACGTCAAGCACTCCCGCTCCCGCGAGGACTTCATCAA
GCGTGTCAAGGAGAACGCCCAGAAGAAGCGCCAGGCCAAGGAGCAGGGTG
TCCACCTCCACTTGAAGCGTCAGCCCGCCATGCCCCGTGAGGCTCACCTC
GTCGAGGGTACCGCTGCCGAGACCATCACCCCATCCCCTACGACACCCAC
ATCTAAACGAATCAAAAACGGTCGATGCGGTTGTTTGGTGTTTCTGGGTT
TTTCAAACTTAGGGTGGGCCTTTGCAATGAGACGAAGCGAAACAGAGGGT
TCCCAGATGTTCTATCACATCTAAGGTTGGCGACATTGTCGATATCAAGG
TCAACGGTGCCGTTCAGAAGGGTATGCCTTCAGCCGTAACTTCAAGGAGA
ACGGCCAGATCCGCCTGTCGACCTACCTGAAGACCTACCGATGGGTCACT
CGCACGGTTTGAGAGCCGGTACTCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50540CAN33_50540Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50540-T1CAN33_50540-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50540-T1.cdsCAN33_50540-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50540-T1.exon4CAN33_50540-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_50540-T1.exon3CAN33_50540-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50540-T1.exon2CAN33_50540-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50540-T1.exon1CAN33_50540-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR018259
DBxrefInterPro:IPR001147
DBxrefInterPro:IPR036948
DBxrefPFAM:PF01157
ProductRibosomal protein L21e family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:291231..292085 -
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