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CAN33_50545-T1, CAN33_50545-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50545-T1
Unique NameCAN33_50545-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:292357..293301+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50545-T1 ID=CAN33_50545-T1|Name=CAN33_50545-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=945bp|location=Sequence derived from alignment at NKJJ01000020.1:292357..293301+ (Aspergillus niger FDAARGOS_311)
ATGGCCCCCGTCCCGTGAGTATACGACCGGCGATCAACCACACCTGTATC
GCATCATTCTAATAGCAATTTTCTCAACAGCCGCGTTTACTCCAAGACCT
ACAAGGTCCCCCGTCGTCGTAAGTAGCCTTATCAGTCTTTGCAAAAATTC
GAGACTTCGCGACATTGAATCTTGGACTAACATATCGGTATAGCTTTCGA
GTCGGCCCGTCTGTTAGTACTCTCCGGCCACTGATCAGAAGCGTGCTTCT
GTTTATGTCGTGTGTTCCCATGCCTAACTGTCATCGCTAGTGACTCGGAA
CTGAAGATTGTCGGCGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCG
TGTCCAGCTCACCCTGTCCAAGATTCGTCGTGCTGCTCGGTATGCGCACC
CCACTTCGCATGGATCATCGACCTTGAGAATGGCCAGGAGAAATTGATGG
AACAATGGCTGACTGTTAGAACAGTGAGCTTCTCACCCTCGACGAGAAGG
ACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGC
ATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCT
CCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGC
TCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGT
CACATCCGGTATGCGCATTCGATAACTTTTTCGGCCGATGACGCCAAGAT
GCTAACTCGAAGAACAGTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTA
CATGGTCCGCCTGGACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCC
CCTACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCT
GCTGCCGGTGGTGGTGACGACGAGGCTGAGGAGGATGAGGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:292357..293301+

>CAN33_50545-T1 ID=CAN33_50545-T1|Name=CAN33_50545-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3492bp|location=Sequence derived from alignment at NKJJ01000020.1:292357..293301+ (Aspergillus niger FDAARGOS_311)
ATGGCCCCCGTCCCCCGCGTTTACTCCAAGACCTACAAGGTCCCCCGTCG
TCCTTTCGAGTCGGCCCGTCTTGACTCGGAACTGAAGATTGTCGGCGAGT
ACGGCCTGCGCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACCCTGTCC
AAGATTCGTCGTGCTGCTCGTGAGCTTCTCACCCTCGACGAGAAGGACCC
CAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGCATCG
GTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCTCCGC
GTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGCTCGG
CCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGTCACA
TCCGTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTCCGCCTG
GACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCTACGGTGGTGG
CCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCGGTGGTG
GTGACGACGAGGCTGAGGAGGATGAGGAGTAAATGGCCCCCGTCCCCCGC
GTTTACTCCAAGACCTACAAGGTCCCCCGTCGTCCTTTCGAGTCGGCCCG
TCTTGACTCGGAACTGAAGATTGTCGGCGAGTACGGCCTGCGCAACAAGC
GTGAGGTGTGGCGTGTCCAGCTCACCCTGTCCAAGATTCGTCGTGCTGCT
CGTGAGCTTCTCACCCTCGACGAGAAGGACCCCAAGCGTCTTTTCGAAGG
TAACGCTTTGATTCGCCGTCTGGTCCGCATCGGTGTCCTCGATGAGTCCC
GCATGAAGCTCGATTACGTCCTGGCCCTCCGCGTTGAGGACTTCTTGGAG
CGTCGTCTTCAGACTTGCGTCTACAAGCTCGGCCTTGCCAAGTCCATCCA
CCACGCCCGTGTCCTGATCAAGCAGCGTCACATCCGTGTCGGCAAGCAGA
TCGTCAACGTCCCCTCCTACATGGTCCGCCTGGACTCCCAGAAGCACATC
GACTTCGCCCTCACCTCCCCCTACGGTGGTGGCCGCCCTGGCCGTGTCCA
GCGCAAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGACGACGAGGCTGAGG
AGGATGAGGAGTAAATGGCCCCCGTCCCCCGCGTTTACTCCAAGACCTAC
AAGGTCCCCCGTCGTCCTTTCGAGTCGGCCCGTCTTGACTCGGAACTGAA
GATTGTCGGCGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCGTGTCC
AGCTCACCCTGTCCAAGATTCGTCGTGCTGCTCGTGAGCTTCTCACCCTC
GACGAGAAGGACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCG
TCTGGTCCGCATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACG
TCCTGGCCCTCCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGC
GTCTACAAGCTCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGAT
CAAGCAGCGTCACATCCGTGTCGGCAAGCAGATCGTCAACGTCCCCTCCT
ACATGGTCCGCCTGGACTCCCAGAAGCACATCGACTTCGCCCTCACCTCC
CCCTACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGC
TGCTGCCGGTGGTGGTGACGACGAGGCTGAGGAGGATGAGGAGTAAATGG
CCCCCGTCCCCCGCGTTTACTCCAAGACCTACAAGGTCCCCCGTCGTCCT
TTCGAGTCGGCCCGTCTTGACTCGGAACTGAAGATTGTCGGCGAGTACGG
CCTGCGCAACAAGCGTGAGGTGTGGCGTGTCCAGCTCACCCTGTCCAAGA
TTCGTCGTGCTGCTCGTGAGCTTCTCACCCTCGACGAGAAGGACCCCAAG
CGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTGGTCCGCATCGGTGT
CCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCTGGCCCTCCGCGTTG
AGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCTACAAGCTCGGCCTT
GCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAGCAGCGTCACATCCG
TGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACATGGTCCGCCTGGACT
CCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCTACGGTGGTGGCCGC
CCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGA
CGACGAGGCTGAGGAGGATGAGGAGTAAATGGCCCCCGTCCCCCGCGTTT
ACTCCAAGACCTACAAGGTCCCCCGTCGTCCTTTCGAGTCGGCCCGTCTT
GACTCGGAACTGAAGATTGTCGGCGAGTACGGCCTGCGCAACAAGCGTGA
GGTGTGGCGTGTCCAGCTCACCCTGTCCAAGATTCGTCGTGCTGCTCGTG
AGCTTCTCACCCTCGACGAGAAGGACCCCAAGCGTCTTTTCGAAGGTAAC
GCTTTGATTCGCCGTCTGGTCCGCATCGGTGTCCTCGATGAGTCCCGCAT
GAAGCTCGATTACGTCCTGGCCCTCCGCGTTGAGGACTTCTTGGAGCGTC
GTCTTCAGACTTGCGTCTACAAGCTCGGCCTTGCCAAGTCCATCCACCAC
GCCCGTGTCCTGATCAAGCAGCGTCACATCCGTGTCGGCAAGCAGATCGT
CAACGTCCCCTCCTACATGGTCCGCCTGGACTCCCAGAAGCACATCGACT
TCGCCCTCACCTCCCCCTACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGC
AAGAAGGCTGCCGCTGCTGCCGGTGGTGGTGACGACGAGGCTGAGGAGGA
TGAGGAGTAAATGGCCCCCGTCCCCCGCGTTTACTCCAAGACCTACAAGG
TCCCCCGTCGTCCTTTCGAGTCGGCCCGTCTTGACTCGGAACTGAAGATT
GTCGGCGAGTACGGCCTGCGCAACAAGCGTGAGGTGTGGCGTGTCCAGCT
CACCCTGTCCAAGATTCGTCGTGCTGCTCGTGAGCTTCTCACCCTCGACG
AGAAGGACCCCAAGCGTCTTTTCGAAGGTAACGCTTTGATTCGCCGTCTG
GTCCGCATCGGTGTCCTCGATGAGTCCCGCATGAAGCTCGATTACGTCCT
GGCCCTCCGCGTTGAGGACTTCTTGGAGCGTCGTCTTCAGACTTGCGTCT
ACAAGCTCGGCCTTGCCAAGTCCATCCACCACGCCCGTGTCCTGATCAAG
CAGCGTCACATCCGTGTCGGCAAGCAGATCGTCAACGTCCCCTCCTACAT
GGTCCGCCTGGACTCCCAGAAGCACATCGACTTCGCCCTCACCTCCCCCT
ACGGTGGTGGCCGCCCTGGCCGTGTCCAGCGCAAGAAGGCTGCCGCTGCT
GCCGGTGGTGGTGACGACGAGGCTGAGGAGGATGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS9CAN33_50545Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50545-T1CAN33_50545-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50545-T1.exon1CAN33_50545-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_50545-T1.exon2CAN33_50545-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50545-T1.exon3CAN33_50545-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50545-T1.exon4CAN33_50545-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_50545-T1.exon5CAN33_50545-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_50545-T1.exon6CAN33_50545-T1.exon6Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50545-T1.cdsCAN33_50545-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR018079
DBxrefInterPro:IPR036986
DBxrefInterPro:IPR005710
DBxrefInterPro:IPR001912
DBxrefInterPro:IPR002942
DBxrefPFAM:PF01479
DBxrefPFAM:PF00163
Product40S ribosomal protein S9
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:292357..293301 +
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