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CAN33_50640-T1, CAN33_50640-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50640-T1
Unique NameCAN33_50640-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:355471..356901-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50640-T1 ID=CAN33_50640-T1|Name=CAN33_50640-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1431bp|location=Sequence derived from alignment at NKJJ01000020.1:355471..356901- (Aspergillus niger FDAARGOS_311)
ATGCGGTTCGCCATGTACGTTGATGAGTGAGTACTAACAACATCCTCATA
TTATCTCCAATCATACGCATCTAACAACAACGGGGAATCAGGTACCACAC
AAGTGGCCTCCCCGGCGCCAACCAAACCCAAGGCATCACGCATGCTATCA
TGGCTTTCGCCCAGTCTACGCTCTTCAATTCTGACTCTCCCCCACAATTT
ACTCCCTTCGAGTCTGTCTCCACCATGCGCAGTCGCTTCAGCCCGGGGAC
TAAGCTCATGATCGCCATCGGCGGATGGGGTGATACCTCAGGGTTCTCGA
CGGCCGCGAAAGATGAGACTTCTCGCAACCAGTATGCGAAGAATGTAGCG
GCTATGGTGAATCAGGTTGGTTTCGATGGTGTTGGTATGTCTCTATACAC
GTCCTCACCATCCCTCCCGTAACTGGTATTGACCAAAAATGTATAGACAT
AGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGACAACACCGA
ACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTCCTGCAAGCG
CTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGCGGTCCCTGG
CAAGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCCCGCAGATCT
GGCCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTCATGAACCGC
CGGAATAATGTCACTATGCACCATACATCTGTCGTGGATTCATTTAATAC
AGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGACAAACTTGG
GAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGCGATGAGCAG
GAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAATGGAGAACGC
GGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTGAAAAGAGTG
TTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGATGGCACGTGT
GGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTGCAGTCAGTA
CGGAAACTGGTATGTCGACTACTCCTACTCTCCTTGCGAACGGTGTATGC
TAATATGTGGCGATGTAGCGGTACAACCGACGACTTCTGCCAAGCAGGTT
GTCTATCTGATTACGGAACATGCAAAGGCATCTCGATTACGGATTCATGG
CGGCGCGCGCAAGAAAACGCTAAATTGGATGATGTCATGGGTGGAGAGTA
CTACTTCGATGACCAGGTCAATGTGTTCTGGACGTGGGATACCGCAGACA
TGATTGCACGCAAGTTCACCGATATCGTCGATAAGCTGGGACTAGGAGGT
GTTATGGCGTGGAGTTTGGGAGAGGATACGCTGGCATGGGAGCATTTGGG
AGCCATGCAGGAGGGTGTTGCTGCCAGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:355471..356901-

>CAN33_50640-T1 ID=CAN33_50640-T1|Name=CAN33_50640-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4980bp|location=Sequence derived from alignment at NKJJ01000020.1:355471..356901- (Aspergillus niger FDAARGOS_311)
CGGTACAACCGACGACTTCTGCCAAGCAGGTTGTCTATCTGATTACGGAA
CATGCAAAGGCATCTCGATTACGGATTCATGGCGGCGCGCGCAAGAAAAC
GCTAAATTGGATGATGTCATGGGTGGAGAGTACTACTTCGATGACCAGGT
CAATGTGTTCTGGACGTGGGATACCGCAGACATGATTGCACGCAAGTTCA
CCGATATCGTCGATAAGCTGGGACTAGGAGGTGTTATGGCGTGGAGTTTG
GGAGAGGATACGCTGGCATGGGAGCATTTGGGAGCCATGCAGGAGGGTGT
TGCTGCCAGGTAGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGA
CTACAAGACAACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACC
CTTTATTCCTGCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTC
TCTATTGCGGTCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACAC
CACAGGCCCGCAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGT
ACGATCTCATGAACCGCCGGAATAATGTCACTATGCACCATACATCTGTC
GTGGATTCATTTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGG
TAATAAGACAAACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAG
ATCCCAGCGATGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTT
GTCGTAATGGAGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTT
GACTTTTGAAAAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGA
GTACGGATGGCACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGA
AGTTGCTGCAGTCAGTACGGAAACTGGTACCACACAAGTGGCCTCCCCGG
CGCCAACCAAACCCAAGGCATCACGCATGCTATCATGGCTTTCGCCCAGT
CTACGCTCTTCAATTCTGACTCTCCCCCACAATTTACTCCCTTCGAGTCT
GTCTCCACCATGCGCAGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGC
CATCGGCGGATGGGGTGATACCTCAGGGTTCTCGACGGCCGCGAAAGATG
AGACTTCTCGCAACCAGTATGCGAAGAATGTAGCGGCTATGGTGAATCAG
GTTGGTTTCGATGGTGTTGATGCGGTTCGCCATGTACGTTGATGACGGTA
CAACCGACGACTTCTGCCAAGCAGGTTGTCTATCTGATTACGGAACATGC
AAAGGCATCTCGATTACGGATTCATGGCGGCGCGCGCAAGAAAACGCTAA
ATTGGATGATGTCATGGGTGGAGAGTACTACTTCGATGACCAGGTCAATG
TGTTCTGGACGTGGGATACCGCAGACATGATTGCACGCAAGTTCACCGAT
ATCGTCGATAAGCTGGGACTAGGAGGTGTTATGGCGTGGAGTTTGGGAGA
GGATACGCTGGCATGGGAGCATTTGGGAGCCATGCAGGAGGGTGTTGCTG
CCAGGTAGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACA
AGACAACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTA
TTCCTGCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTAT
TGCGGTCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACACCACAG
GCCCGCAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACGAT
CTCATGAACCGCCGGAATAATGTCACTATGCACCATACATCTGTCGTGGA
TTCATTTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATA
AGACAAACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCC
AGCGATGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGT
AATGGAGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTT
TTGAAAAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACG
GATGGCACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTG
CTGCAGTCAGTACGGAAACTGGTACCACACAAGTGGCCTCCCCGGCGCCA
ACCAAACCCAAGGCATCACGCATGCTATCATGGCTTTCGCCCAGTCTACG
CTCTTCAATTCTGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGTCTC
CACCATGCGCAGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCATCG
GCGGATGGGGTGATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAGACT
TCTCGCAACCAGTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGTTGG
TTTCGATGGTGTTGATGCGGTTCGCCATGTACGTTGATGACGGTACAACC
GACGACTTCTGCCAAGCAGGTTGTCTATCTGATTACGGAACATGCAAAGG
CATCTCGATTACGGATTCATGGCGGCGCGCGCAAGAAAACGCTAAATTGG
ATGATGTCATGGGTGGAGAGTACTACTTCGATGACCAGGTCAATGTGTTC
TGGACGTGGGATACCGCAGACATGATTGCACGCAAGTTCACCGATATCGT
CGATAAGCTGGGACTAGGAGGTGTTATGGCGTGGAGTTTGGGAGAGGATA
CGCTGGCATGGGAGCATTTGGGAGCCATGCAGGAGGGTGTTGCTGCCAGG
TAGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGACA
ACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTCCT
GCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGCGG
TCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCCCG
CAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTCAT
GAACCGCCGGAATAATGTCACTATGCACCATACATCTGTCGTGGATTCAT
TTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGACA
AACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGCGA
TGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAATGG
AGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTGAA
AAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGATGG
CACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTGCA
GTCAGTACGGAAACTGGTACCACACAAGTGGCCTCCCCGGCGCCAACCAA
ACCCAAGGCATCACGCATGCTATCATGGCTTTCGCCCAGTCTACGCTCTT
CAATTCTGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGTCTCCACCA
TGCGCAGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCATCGGCGGA
TGGGGTGATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAGACTTCTCG
CAACCAGTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGTTGGTTTCG
ATGGTGTTGATGCGGTTCGCCATGTACGTTGATGACGGTACAACCGACGA
CTTCTGCCAAGCAGGTTGTCTATCTGATTACGGAACATGCAAAGGCATCT
CGATTACGGATTCATGGCGGCGCGCGCAAGAAAACGCTAAATTGGATGAT
GTCATGGGTGGAGAGTACTACTTCGATGACCAGGTCAATGTGTTCTGGAC
GTGGGATACCGCAGACATGATTGCACGCAAGTTCACCGATATCGTCGATA
AGCTGGGACTAGGAGGTGTTATGGCGTGGAGTTTGGGAGAGGATACGCTG
GCATGGGAGCATTTGGGAGCCATGCAGGAGGGTGTTGCTGCCAGGTAGAC
ATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGACAACACC
GAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTCCTGCAAG
CGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGCGGTCCCT
GGCAAGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCCCGCAGAT
CTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTCATGAACC
GCCGGAATAATGTCACTATGCACCATACATCTGTCGTGGATTCATTTAAT
ACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGACAAACTT
GGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGCGATGAGC
AGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAATGGAGAAC
GCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTGAAAAGAG
TGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGATGGCACGT
GTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTGCAGTCAG
TACGGAAACTGGTACCACACAAGTGGCCTCCCCGGCGCCAACCAAACCCA
AGGCATCACGCATGCTATCATGGCTTTCGCCCAGTCTACGCTCTTCAATT
CTGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGTCTCCACCATGCGC
AGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCATCGGCGGATGGGG
TGATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAGACTTCTCGCAACC
AGTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGTTGGTTTCGATGGT
GTTGATGCGGTTCGCCATGTACGTTGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50640CAN33_50640Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50640-T1CAN33_50640-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50640-T1.cdsCAN33_50640-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50640-T1.exon4CAN33_50640-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_50640-T1.exon3CAN33_50640-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_50640-T1.exon2CAN33_50640-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50640-T1.exon1CAN33_50640-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR018371
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR036861
DBxrefInterPro:IPR011583
DBxrefInterPro:IPR001002
DBxrefPFAM:PF00704
DBxrefPFAM:PF00187
ProductGlycosyl hydrolases family 18 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:355471..356901 -
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