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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:404459..405373- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50730-T1 ID=CAN33_50730-T1|Name=CAN33_50730-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=915bp|location=Sequence derived from alignment at NKJJ01000020.1:404459..405373- (Aspergillus niger FDAARGOS_311)
ATGGACCGACATTTCCCCCTAATCCAAAGCACCTCGACCCACGCGCAAAC
AAATCACCACCGCATCGCCTTCTCCACAACCACCTTCCCATTCACGGACC
CCTCCCCGACATCTGAATCCCCCAACCTCCTAGGCATCAGGATAGATATT
TGTGCGCGCGACGGAACATACACCAAACCGTACTACATACTCCTCCGACG
GACAGCACACAAGACACAAGATGGGAAGAGGGAAGTGCGCGTGCATAAGC
ATACCGTTCCGGCGGTGGTGGATATGAGGAAGTTGGAGAGGGTGTTTCTG
CCGGCTTCATCCATGACTACTTCTCAGGATGAGGAAGACGCGATGGAAGA
GGAGCAGGAGCAGGAGCAACTGAAACCATGGAAACACAAGGCGCGCAAAC
AGGATCTCAAGTCCTTTGTTCGGGAGGTGCGCAAGCAGTTAGTTGTGTGG
CATTTACGGTGCGATGCGGTGCGCTATCTGCGAGAGAAACTGGGCGTCGT
GACACGTGGAGTAAATGACGACGACGGTATTTATGAGGATGATGAGAGGC
CCTGGGAGAGGGATATTCTTGGCCCTAATGCTTCTACAACGGCTGCTACT
GGAGGTTCCGGTGCTGGGGAGGAGACGCGCATAGCGAAAAATGAACTTGG
GATTGTGTCGTTGGCGCCGACGGCGTTGGAGGCGGTCTATGTGCGGGTGG
AGTGGGAGGATGGGCGCGTGGGGAGGTTCAAGATCTCTAATACGGGGGTC
GTGGAACGGGCGGTGGTGCTTGGGGATAGTGGTAGAGATAAGCAGACTGA
GGGGTTATTACGGGCGGGGACGGGAGGGTTGAGACTTTGCTGGAGCGGTT
GGGGAAGCGTCGCGGGAATAGTAAGGAGGTTGGGTCTGCTTCGCCGGCTT
CTGATGTGTGATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:404459..405373- >CAN33_50730-T1 ID=CAN33_50730-T1|Name=CAN33_50730-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1632bp|location=Sequence derived from alignment at NKJJ01000020.1:404459..405373- (Aspergillus niger FDAARGOS_311)
GCGCGCAAACAGGATCTCAAGTCCTTTGTTCGGGAGGTGCGCAAGCAGTT
AGTTGTGTGGCATTTACGGTGCGATGCGGTGCGCTATCTGCGAGAGAAAC
TGGGCGTCGTGACACGTGGAGTAAATGACGACGACGGTATTTATGAGGAT
GATGAGAGGCCCTGGGAGAGGGATATTCTTGGCCCTAATGCTTCTACAAC
GGCTGCTACTGGAGGTTCCGGTGCTGGGGAGGAGACGCGCATAGCGAAAA
ATGAACTTGGGATTGTGTCGTTGGCGCCGACGGCGTTGGAGGCGGTCTAT
GTGCGGGTGGAGTGGGAGGATGGGCGCGTGGGGAGGTTCAAGATCTCTAA
TACGGGGGTCGTGGAACGGGCGGTGGTGCTTGGGGATAGTGGTAGAGATA
AGCAGACTGAGGGGTTATTACGGGCGGGGACGGGAGGGTTGAGACTTTGC
TGGAGCGGTTGGGGAAGCGTCGCGGGAATAGTAAGGAGGTTGGGTCTGCT
TCGCCGGCTTCTGATGTGTGATTGAATGGACCGACATTTCCCCCTAATCC
AAAGCACCTCGACCCACGCGCAAACAAATCACCACCGCATCGCCTTCTCC
ACAACCACCTTCCCATTCACGGACCCCTCCCCGACATCTGAATCCCCCAA
CCTCCTAGGCATCAGGATAGATATTTGTGCGCGCGACGGAACATACACCA
AACCGTACTACATACTCCTCCGACGGACAGCACACAAGACACAAGATGGG
AAGAGGGAAGTGCGCGTGCATAAGCATACCGTTCCGGCGGTGGTGGATAT
GAGGAAGTTGGAGAGGGCGCGCAAACAGGATCTCAAGTCCTTTGTTCGGG
AGGTGCGCAAGCAGTTAGTTGTGTGGCATTTACGGTGCGATGCGGTGCGC
TATCTGCGAGAGAAACTGGGCGTCGTGACACGTGGAGTAAATGACGACGA
CGGTATTTATGAGGATGATGAGAGGCCCTGGGAGAGGGATATTCTTGGCC
CTAATGCTTCTACAACGGCTGCTACTGGAGGTTCCGGTGCTGGGGAGGAG
ACGCGCATAGCGAAAAATGAACTTGGGATTGTGTCGTTGGCGCCGACGGC
GTTGGAGGCGGTCTATGTGCGGGTGGAGTGGGAGGATGGGCGCGTGGGGA
GGTTCAAGATCTCTAATACGGGGGTCGTGGAACGGGCGGTGGTGCTTGGG
GATAGTGGTAGAGATAAGCAGACTGAGGGGTTATTACGGGCGGGGACGGG
AGGGTTGAGACTTTGCTGGAGCGGTTGGGGAAGCGTCGCGGGAATAGTAA
GGAGGTTGGGTCTGCTTCGCCGGCTTCTGATGTGTGATTGAATGGACCGA
CATTTCCCCCTAATCCAAAGCACCTCGACCCACGCGCAAACAAATCACCA
CCGCATCGCCTTCTCCACAACCACCTTCCCATTCACGGACCCCTCCCCGA
CATCTGAATCCCCCAACCTCCTAGGCATCAGGATAGATATTTGTGCGCGC
GACGGAACATACACCAAACCGTACTACATACTCCTCCGACGGACAGCACA
CAAGACACAAGATGGGAAGAGGGAAGTGCGCGTGCATAAGCATACCGTTC
CGGCGGTGGTGGATATGAGGAAGTTGGAGAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000776 | kinetochore |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034508 | centromere complex assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018464 |
| DBxref | PFAM:PF09496 |
| Product | Cenp-O kinetochore centromere component family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:404459..405373 - |
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