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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:422064..423115+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50765-T1 ID=CAN33_50765-T1|Name=CAN33_50765-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1052bp|location=Sequence derived from alignment at NKJJ01000020.1:422064..423115+ (Aspergillus niger FDAARGOS_311)
ATGGCATCGACAATGAGATCCATGAGAAGGATCCTCACAAGGGCATCCCG
CTCCGCCGTATCCCCAATTGAACACACCGCCGCGCTCAGAACACCGGCCG
GCCTCTTCTCCGCCAACCTCAGAGCAGCCAACAACAGCAGCACCAGCAAT
GTAGGAGTTCGCCGCTCCTTCTCAACTTCTCCGCTTTGTCTTCGCGCGCG
CACAATGGGCCAATTGAAGGCGCGGCACTCGACGGGCCCGTTCTCGTGGA
AGGCGGCGCTGCTTTTCGTTTTGACGGGTGGTGGTATGATCATTTACTTC
CGGGTTGAGAAGGAGAGATTGGAGCGCAAGCGCATCGCGGAGATGAGTAA
GGGTGTTGGGAAGCCGAAGGTTGGAGGGCCGTTTACGTTGAAGGATCTGG
ATGGGAAGGAGTTTACGGCGGAGGATTTGAAGGGGAAGTATAGTTTTGTG
AGTATCTCATTCTTATAGGGTTGGTTGTTATGATGAAGGGGATATTGGAG
CTAATTGTGTTTGGTGTTCTTGTTAGGTTTACTTTGGATTCACCCACTGC
CCTGATATCTGCCCCGATGAGCTGGACAAAATGGCCGAGATTATTGATAA
GGTGAAGGAGGCTACGAAGGGCGAGAATATCTTCCTGCCTGTGTTTATTA
CTTGCGACCCTGCCAGAGATACGCCTGAGGTGCTGCGCACCTATCTGAAG
GAGTTCCACCCTGGTATTATTGGTTTGACTGGAACGTATGATGAGGTGAA
GCATGTTTGCAAGCAGTACCGGGTGTACTTCAGTACCCCGAGGGATATTA
AGCCCGGGGAGGATTATCTGGTCGATCACAGCATCTATTTCTATTTGATG
GGTATTTTCTCTCCTTATGCAGCTTGGGGGATAGGTTGAGTGATGTGCGG
CACGTGAGCTGACTTTTGTTTGTTTGACAGATCCCGATAATGACTTCGTC
GAGTGCATCGGTCGTCAGGACACGCCTGAGTCGGCTACGAGGACGATCAT
GGAACATATCAATGACTGGAAGCGGGAGGGCAAGCCCCTTAAGAAGGACT
AA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:422064..423115+ >CAN33_50765-T1 ID=CAN33_50765-T1|Name=CAN33_50765-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2682bp|location=Sequence derived from alignment at NKJJ01000020.1:422064..423115+ (Aspergillus niger FDAARGOS_311)
ATGGCATCGACAATGAGATCCATGAGAAGGATCCTCACAAGGGCATCCCG
CTCCGCCGTATCCCCAATTGAACACACCGCCGCGCTCAGAACACCGGCCG
GCCTCTTCTCCGCCAACCTCAGAGCAGCCAACAACAGCAGCACCAGCAAT
GTAGGAGTTCGCCGCTCCTTCTCAACTTCTCCGCTTTGTCTTCGCGCGCG
CACAATGGGCCAATTGAAGGCGCGGCACTCGACGGGCCCGTTCTCGTGGA
AGGCGGCGCTGCTTTTCGTTTTGACGGGTGGTGGTATGATCATTTACTTC
CGGGTTGAGAAGGAGAGATTGGAGCGCAAGCGCATCGCGGAGATGAGTAA
GGGTGTTGGGAAGCCGAAGGTTGGAGGGCCGTTTACGTTGAAGGATCTGG
ATGGGAAGGAGTTTACGGCGGAGGATTTGAAGGGGAAGTATAGTTTTGTT
TACTTTGGATTCACCCACTGCCCTGATATCTGCCCCGATGAGCTGGACAA
AATGGCCGAGATTATTGATAAGGTGAAGGAGGCTACGAAGGGCGAGAATA
TCTTCCTGCCTGTGTTTATTACTTGCGACCCTGCCAGAGATACGCCTGAG
GTGCTGCGCACCTATCTGAAGGAGTTCCACCCTGGTATTATTGGTTTGAC
TGGAACGTATGATGAGGTGAAGCATGTTTGCAAGCAGTACCGGGTGTACT
TCAGTACCCCGAGGGATATTAAGCCCGGGGAGGATTATCTGGTCGATCAC
AGCATCTATTTCTATTTGATGGATCCCGATAATGACTTCGTCGAGTGCAT
CGGTCGTCAGGACACGCCTGAGTCGGCTACGAGGACGATCATGGAACATA
TCAATGACTGGAAGCGGGAGGGCAAGCCCCTTAAGAAGGACTAAATGGCA
TCGACAATGAGATCCATGAGAAGGATCCTCACAAGGGCATCCCGCTCCGC
CGTATCCCCAATTGAACACACCGCCGCGCTCAGAACACCGGCCGGCCTCT
TCTCCGCCAACCTCAGAGCAGCCAACAACAGCAGCACCAGCAATGTAGGA
GTTCGCCGCTCCTTCTCAACTTCTCCGCTTTGTCTTCGCGCGCGCACAAT
GGGCCAATTGAAGGCGCGGCACTCGACGGGCCCGTTCTCGTGGAAGGCGG
CGCTGCTTTTCGTTTTGACGGGTGGTGGTATGATCATTTACTTCCGGGTT
GAGAAGGAGAGATTGGAGCGCAAGCGCATCGCGGAGATGAGTAAGGGTGT
TGGGAAGCCGAAGGTTGGAGGGCCGTTTACGTTGAAGGATCTGGATGGGA
AGGAGTTTACGGCGGAGGATTTGAAGGGGAAGTATAGTTTTGTTTACTTT
GGATTCACCCACTGCCCTGATATCTGCCCCGATGAGCTGGACAAAATGGC
CGAGATTATTGATAAGGTGAAGGAGGCTACGAAGGGCGAGAATATCTTCC
TGCCTGTGTTTATTACTTGCGACCCTGCCAGAGATACGCCTGAGGTGCTG
CGCACCTATCTGAAGGAGTTCCACCCTGGTATTATTGGTTTGACTGGAAC
GTATGATGAGGTGAAGCATGTTTGCAAGCAGTACCGGGTGTACTTCAGTA
CCCCGAGGGATATTAAGCCCGGGGAGGATTATCTGGTCGATCACAGCATC
TATTTCTATTTGATGGATCCCGATAATGACTTCGTCGAGTGCATCGGTCG
TCAGGACACGCCTGAGTCGGCTACGAGGACGATCATGGAACATATCAATG
ACTGGAAGCGGGAGGGCAAGCCCCTTAAGAAGGACTAAATGGCATCGACA
ATGAGATCCATGAGAAGGATCCTCACAAGGGCATCCCGCTCCGCCGTATC
CCCAATTGAACACACCGCCGCGCTCAGAACACCGGCCGGCCTCTTCTCCG
CCAACCTCAGAGCAGCCAACAACAGCAGCACCAGCAATGTAGGAGTTCGC
CGCTCCTTCTCAACTTCTCCGCTTTGTCTTCGCGCGCGCACAATGGGCCA
ATTGAAGGCGCGGCACTCGACGGGCCCGTTCTCGTGGAAGGCGGCGCTGC
TTTTCGTTTTGACGGGTGGTGGTATGATCATTTACTTCCGGGTTGAGAAG
GAGAGATTGGAGCGCAAGCGCATCGCGGAGATGAGTAAGGGTGTTGGGAA
GCCGAAGGTTGGAGGGCCGTTTACGTTGAAGGATCTGGATGGGAAGGAGT
TTACGGCGGAGGATTTGAAGGGGAAGTATAGTTTTGTTTACTTTGGATTC
ACCCACTGCCCTGATATCTGCCCCGATGAGCTGGACAAAATGGCCGAGAT
TATTGATAAGGTGAAGGAGGCTACGAAGGGCGAGAATATCTTCCTGCCTG
TGTTTATTACTTGCGACCCTGCCAGAGATACGCCTGAGGTGCTGCGCACC
TATCTGAAGGAGTTCCACCCTGGTATTATTGGTTTGACTGGAACGTATGA
TGAGGTGAAGCATGTTTGCAAGCAGTACCGGGTGTACTTCAGTACCCCGA
GGGATATTAAGCCCGGGGAGGATTATCTGGTCGATCACAGCATCTATTTC
TATTTGATGGATCCCGATAATGACTTCGTCGAGTGCATCGGTCGTCAGGA
CACGCCTGAGTCGGCTACGAGGACGATCATGGAACATATCAATGACTGGA
AGCGGGAGGGCAAGCCCCTTAAGAAGGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005743 | mitochondrial inner membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005507 | copper ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045454 | cell redox homeostasis |
| GO:0006825 | copper ion transport |
| GO:0008535 | respiratory chain complex IV assembly |
| GO:0006878 | cellular copper ion homeostasis |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264ENO |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR013766 |
| DBxref | InterPro:IPR017276 |
| DBxref | InterPro:IPR003782 |
| DBxref | PFAM:PF02630 |
| DBxref | PFAM:PF00578 |
| Product | SCO1/SenC family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:422064..423115 + |
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