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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:441032..442443+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50800-T1 ID=CAN33_50800-T1|Name=CAN33_50800-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1412bp|location=Sequence derived from alignment at NKJJ01000020.1:441032..442443+ (Aspergillus niger FDAARGOS_311)
ATGCTCAGTCTCATCACAAGCGTTATGGTGAATCGAGACCCACGGCAAAT
CATCGGGAAGCCCGCCCCGCACAAAGATACTCCACCAGAGTCAGACTGAG
TAATAATATTGTTTGGAGTTCCTGATTGCGACAGGTATTAGGAGTAGTAG
CAAGCATTATCTTGTTAATAACATGCTGCATTGCAACGATAGAGACAAAT
AGAGAAGGAGAAGCGAGCGTAGCGAATACACGGCTTCTCGGTTAGGGGAA
ATCCAGCCAGCATTAAGGGAGCAAGCCCGAGCTAGCGTAGGGGAACCCCT
GCTAATTGCCGCGGAGAAAGTGAAGGAGTAGCTGGAGGACAATGCAACAC
GTTAGACCCATACGAACAAGATCTCTGCATCCTGAGATATAGTATGAGAA
TCGTAAAACGGACGTATATTCAACCGTACAAAAGCCTCATAAATTCGTAG
TACTTGCTCACCGCAACATCAACCGAATCTCAATGTCCCGCGGATAAGCA
GAAATCAAGTTTGTACCCAATTCCCTGCTAAAATCTGACCGGCAAGTGCG
GGCACAGAGGTCTGAGAGGTGGTGATCAACGATAAAATATACGGCAGAAT
ACTACCCCGCCACAATCGCAATTACGGAAATAATCCTAGATTCTCCTTTT
CTCGTGACTTCAAATCCCTTAAAATAACATAATGGCTTCTCCAAACCCCC
AAACCAAAACAATCCCCTACCTGGCCACTTCCCCAACACCACCTCCGACG
CCCAGCGCGTCTTCGATGTTCTCCAACTTGGAGGCATCGCCATCGTCCCC
ACAGAAATCGGCTACGGCCTCCTAGCCTCGTCCGTCGAGGCCATCGAGCG
AGCTTTCTCCGCGAAACGACGTCGGCCAGGACACGCCCATGGTCTAATCG
GATCCTACGAGCTGCATCATGAACTGCACGTTCTCGAACCCGAGAGGTTC
GAAATGACGCGCGTTCTCACTCACGACCTCGATATGGGCTTAGGCATCGT
GGCTCCTTATAAAGCGGACCATCCCATTCTGGCCAAATTTACACCGAAAA
CGCTAGCCAACGTGGTCAAGGATGACACGATAGCGATGTTTGTGGGTGGG
GGCTCGCTGTTACGGGAGATTTGTAGGCTGAACTACGAGGCTGGACAGGT
GATGGTCGGATCTAGTGCGAATCTAAGTGGGGGAGGGCAGAAGTTCCTCG
TTGAGGATATTGAGGAGGAGATTATAGAGGTCGCGGATTTGATTGTTGAT
TATGGGTTGCAGAGGTATCATGTTTATGGGAGGGCGTCGATTGTGATGGA
TTTTGGGGAGATGAAGGTTCTTCGTATGGGGTCGTGCTATGAGCTTTTTA
GGGAGAGGATGGGTAGGTTCTGGGGGGTGGAGTTGCCAGAAGATCCAGTG
TATAAGACTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:441032..442443+ >CAN33_50800-T1 ID=CAN33_50800-T1|Name=CAN33_50800-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1368bp|location=Sequence derived from alignment at NKJJ01000020.1:441032..442443+ (Aspergillus niger FDAARGOS_311)
ATGCTCAGTCTCATCACAAGCGTTATGCGCGTCTTCGATGTTCTCCAACT
TGGAGGCATCGCCATCGTCCCCACAGAAATCGGCTACGGCCTCCTAGCCT
CGTCCGTCGAGGCCATCGAGCGAGCTTTCTCCGCGAAACGACGTCGGCCA
GGACACGCCCATGGTCTAATCGGATCCTACGAGCTGCATCATGAACTGCA
CGTTCTCGAACCCGAGAGGTTCGAAATGACGCGCGTTCTCACTCACGACC
TCGATATGGGCTTAGGCATCGTGGCTCCTTATAAAGCGGACCATCCCATT
CTGGCCAAATTTACACCGAAAACGCTAGCCAACGTGGTCAAGGATGACAC
GATAGCGATGTTTGTGGGTGGGGGCTCGCTGTTACGGGAGATTTGTAGGC
TGAACTACGAGGCTGGACAGGTGATGGTCGGATCTAGTGCGAATCTAAGT
GGGGGAGGGCAGAAGTTCCTCGTTGAGGATATTGAGGAGGAGATTATAGA
GGTCGCGGATTTGATTGTTGATTATGGGTTGCAGAGGTATCATGTTTATG
GGAGGGCGTCGATTGTGATGGATTTTGGGGAGATGAAGGTTCTTCGTATG
GGGTCGTGCTATGAGCTTTTTAGGGAGAGGATGGGTAGGTTCTGGGGGGT
GGAGTTGCCAGAAGATCCAGTGTATAAGACTTAAATGCTCAGTCTCATCA
CAAGCGTTATGCGCGTCTTCGATGTTCTCCAACTTGGAGGCATCGCCATC
GTCCCCACAGAAATCGGCTACGGCCTCCTAGCCTCGTCCGTCGAGGCCAT
CGAGCGAGCTTTCTCCGCGAAACGACGTCGGCCAGGACACGCCCATGGTC
TAATCGGATCCTACGAGCTGCATCATGAACTGCACGTTCTCGAACCCGAG
AGGTTCGAAATGACGCGCGTTCTCACTCACGACCTCGATATGGGCTTAGG
CATCGTGGCTCCTTATAAAGCGGACCATCCCATTCTGGCCAAATTTACAC
CGAAAACGCTAGCCAACGTGGTCAAGGATGACACGATAGCGATGTTTGTG
GGTGGGGGCTCGCTGTTACGGGAGATTTGTAGGCTGAACTACGAGGCTGG
ACAGGTGATGGTCGGATCTAGTGCGAATCTAAGTGGGGGAGGGCAGAAGT
TCCTCGTTGAGGATATTGAGGAGGAGATTATAGAGGTCGCGGATTTGATT
GTTGATTATGGGTTGCAGAGGTATCATGTTTATGGGAGGGCGTCGATTGT
GATGGATTTTGGGGAGATGAAGGTTCTTCGTATGGGGTCGTGCTATGAGC
TTTTTAGGGAGAGGATGGGTAGGTTCTGGGGGGTGGAGTTGCCAGAAGAT
CCAGTGTATAAGACTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003725 | double-stranded RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR017945 |
| DBxref | InterPro:IPR006070 |
| DBxref | PFAM:PF01300 |
| Product | Telomere recombination family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:441032..442443 + |
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