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CAN33_51070-T1, CAN33_51070-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51070-T1
Unique NameCAN33_51070-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:606405..607315-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51070-T1 ID=CAN33_51070-T1|Name=CAN33_51070-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=911bp|location=Sequence derived from alignment at NKJJ01000020.1:606405..607315- (Aspergillus niger FDAARGOS_311)
ATGTCTATGGACGCCAAAGAAATCGAGCTCCGGGCCAAGGCCATGACCAA
GGCCGCCTCTTCCAACGAACCTCCCTCTACCATCATACCACTACTCAAGC
AACTGCAACAAGGGGTGAAAGCCACCGAAGACCTGCTGCGATCGACCCGT
GTCGGTATCGCCGTCAACAAACTTAAACAACACAAATCTCCCGAAGTCGC
CCGTCTCGCGAGCGAAATCGTCTCCAAGTGGCGCCACGAAGTGAACAAGC
AAAAGGCCGGGGCTTCCCCCGGCGCTAGCCAACGGTCGAGCAGCTCTCCC
CACCCGAAAACCAACGGCACCCCCTCCGGCGGTGCGACTCCCTCCGATAA
GGCCTCGAAGCTCTCGGTGCCTCCCGACAAGCGTACCTGGAAGGCCGATG
GCGTGGACACCAACCAGACCGGCAACAGAATTCGCGACAGCTGCATCGGC
TTGATGTACGATGGGCTGTGTCTCAACTCGGTTGAACCCCCCGCACAGTC
CTGTCCAAGGCGTCGGCCGTCGAAGCGGCAGCCTTTAGCGACCTCGGACC
GGAAACGAAGGAACAATACCGCACGAAGATCCGCAGTCTCTACCAGAACC
TCAAGAACAAATCGAACCCGACACTGCGAGTGCGGGTCCTCAACGGCGAC
GTGACGCCAGAACAGTTCGTCCGGATGTCGCACGACGAACTCCGGTCGGC
GGAACAGCAGGAGCGCGACCGCAAGATTCAAAAGGAGAACATGGACAAGG
CGATGGTGGCACAGGCGGAGCGGAGTATCAGTACGAGCTTGCAATGTGGC
AAGTGTGGACAGCGCAAGGTGACATATACGGAAGCGCAGACGCGCAGTGC
GGACGAACCGATGACATTGTTTTGTACGTGTATGAACTGCGGCAAGTCAT
GGAAGCAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:606405..607315-

>CAN33_51070-T1 ID=CAN33_51070-T1|Name=CAN33_51070-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1764bp|location=Sequence derived from alignment at NKJJ01000020.1:606405..607315- (Aspergillus niger FDAARGOS_311)
TCCTGTCCAAGGCGTCGGCCGTCGAAGCGGCAGCCTTTAGCGACCTCGGA
CCGGAAACGAAGGAACAATACCGCACGAAGATCCGCAGTCTCTACCAGAA
CCTCAAGAACAAATCGAACCCGACACTGCGAGTGCGGGTCCTCAACGGCG
ACGTGACGCCAGAACAGTTCGTCCGGATGTCGCACGACGAACTCCGGTCG
GCGGAACAGCAGGAGCGCGACCGCAAGATTCAAAAGGAGAACATGGACAA
GGCGATGGTGGCACAGGCGGAGCGGAGTATCAGTACGAGCTTGCAATGTG
GCAAGTGTGGACAGCGCAAGGTGACATATACGGAAGCGCAGACGCGCAGT
GCGGACGAACCGATGACATTGTTTTGTACGTGTATGAACTGCGGCAAGTC
ATGGAAGCAGTGAATGTCTATGGACGCCAAAGAAATCGAGCTCCGGGCCA
AGGCCATGACCAAGGCCGCCTCTTCCAACGAACCTCCCTCTACCATCATA
CCACTACTCAAGCAACTGCAACAAGGGGTGAAAGCCACCGAAGACCTGCT
GCGATCGACCCGTGTCGGTATCGCCGTCAACAAACTTAAACAACACAAAT
CTCCCGAAGTCGCCCGTCTCGCGAGCGAAATCGTCTCCAAGTGGCGCCAC
GAAGTGAACAAGCAAAAGGCCGGGGCTTCCCCCGGCGCTAGCCAACGGTC
GAGCAGCTCTCCCCACCCGAAAACCAACGGCACCCCCTCCGGCGGTGCGA
CTCCCTCCGATAAGGCCTCGAAGCTCTCGGTGCCTCCCGACAAGCGTACC
TGGAAGGCCGATGGCGTGGACACCAACCAGACCGGCAACAGAATTCGCGA
CAGCTGCATCGGCTTGATGTACGATGGGCTGTTCCTGTCCAAGGCGTCGG
CCGTCGAAGCGGCAGCCTTTAGCGACCTCGGACCGGAAACGAAGGAACAA
TACCGCACGAAGATCCGCAGTCTCTACCAGAACCTCAAGAACAAATCGAA
CCCGACACTGCGAGTGCGGGTCCTCAACGGCGACGTGACGCCAGAACAGT
TCGTCCGGATGTCGCACGACGAACTCCGGTCGGCGGAACAGCAGGAGCGC
GACCGCAAGATTCAAAAGGAGAACATGGACAAGGCGATGGTGGCACAGGC
GGAGCGGAGTATCAGTACGAGCTTGCAATGTGGCAAGTGTGGACAGCGCA
AGGTGACATATACGGAAGCGCAGACGCGCAGTGCGGACGAACCGATGACA
TTGTTTTGTACGTGTATGAACTGCGGCAAGTCATGGAAGCAGTGAATGTC
TATGGACGCCAAAGAAATCGAGCTCCGGGCCAAGGCCATGACCAAGGCCG
CCTCTTCCAACGAACCTCCCTCTACCATCATACCACTACTCAAGCAACTG
CAACAAGGGGTGAAAGCCACCGAAGACCTGCTGCGATCGACCCGTGTCGG
TATCGCCGTCAACAAACTTAAACAACACAAATCTCCCGAAGTCGCCCGTC
TCGCGAGCGAAATCGTCTCCAAGTGGCGCCACGAAGTGAACAAGCAAAAG
GCCGGGGCTTCCCCCGGCGCTAGCCAACGGTCGAGCAGCTCTCCCCACCC
GAAAACCAACGGCACCCCCTCCGGCGGTGCGACTCCCTCCGATAAGGCCT
CGAAGCTCTCGGTGCCTCCCGACAAGCGTACCTGGAAGGCCGATGGCGTG
GACACCAACCAGACCGGCAACAGAATTCGCGACAGCTGCATCGGCTTGAT
GTACGATGGGCTGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51070CAN33_51070Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51070-T1CAN33_51070-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51070-T1.cdsCAN33_51070-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51070-T1.exon2CAN33_51070-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51070-T1.exon1CAN33_51070-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092645TJ
DBxrefInterPro:IPR035100
DBxrefInterPro:IPR035441
DBxrefInterPro:IPR036575
DBxrefInterPro:IPR017923
DBxrefInterPro:IPR001222
DBxrefInterPro:IPR003618
DBxrefInterPro:IPR003617
DBxrefPFAM:PF07500
DBxrefPFAM:PF01096
DBxrefPFAM:PF08711
ProductTranscription factor S-II (TFIIS) central domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:606405..607315 -
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