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CAN33_51080-T1, CAN33_51080-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51080-T1
Unique NameCAN33_51080-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:609339..611045-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51080-T1 ID=CAN33_51080-T1|Name=CAN33_51080-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1707bp|location=Sequence derived from alignment at NKJJ01000020.1:609339..611045- (Aspergillus niger FDAARGOS_311)
ATGGCCGCCCATCTACCTCCGGCTACCGGTGCGGGGTCCCCGCAGAGTGT
GGAATCAATCACTCGCATGGCTCAGGATTATGAGTACAACCCGTCTATAC
CTCTACGCTACTGGCTGCGAACAGCGTCTACTCTCATGAGAGAGGTTGGT
AGACTTGCTGCTTGGCTATTGTGGAGTGAGCTAACTGATGTGGTGGCTTA
GGCTCGGATTTACGAACGCGAAAAGCACGAAGAACAAGCCTACCTTTTAT
TGTTTCGCCATGCTCAGTTGGTACTTGTCAATTTGGCGGAGCATCCAGAG
GCCAGAGATGAAAAGAACCGGAAAGCTTTGGTGGAAGCCGAAAAGGAGGT
CAAACGAAACCTGAAGGTCCTCGAAGTTCTGAAACCCCGGATCAACAAAC
GCTACGAGCGCTATACTCAGTTGATGCGTGAACGGCAAGCTCGCGCACCA
GCAGCGGCGAATAACACTCCCACTTCAACCCAGAGACCCCCTCAAGATCC
CGCCCTCGCAGGGGTCGTGGAACCTCTGGAAGCAGGAGAGAACAAAGACC
TGGCGGTGCAGCTGGCTCGGACGGAGCTTAGCCGACGAGCAACTGTCCGA
AAGGCTATCCGACAAGCAGGCATAACACCTGAAGAGGAGCAGACTCGTCG
GGCTGCTGGCGTGTGGGGAGACTGGGAGCATGCCCTGCGCAAAGATGGAA
CCGAGGACGATGACTTGAGCCGGCGCATACAGAACGTGAGAATCCAGATG
GACGATCCGCGGGCGGATCACCGTCCACAGATTGCCACTAAGCCTATGGT
CCGGCCATCTGCCGCAACCTCTTCAACCGGCGCATACAAGTATCCGAGCG
TCCCTCGTCAGAAGCCGCTGGAAGTTCCGTCGGCCGCAAAGGTGGAGCCT
GAGAAGAGGATTGTTCTTCCGCCCAAAGCGCCCGCACTGCCTCCTAAGGA
AACTTCGTATGTACATGAACTGGCTGGCCTTGAAGGACCTTCACCTCCAC
CTCGTCCAGACAAGGTCTCGCCCGCAGCGATCCCGGCTGAGCCTCCTGTG
CTTCCTGGAAAGGTTCCAGCAACCGATGGGTCAGCTGCCAGCCCGAATTT
GGACCCGTCCAGCTATACCTTCAAGCCCTCTGCTTATCTAGAGAACGGAA
CGCCTCTGCGGACGTTGTTCCTGCCACCTGATCTACGCAAGCACTTCATC
TCACTGGTATCCCCGAATACGCAGCGCAATCTAGAGACGTGCGGCATTTT
GTGCGGCACGCTAGTCTCCAACGCCTTGTTCGTTTCGAGGCTGCTCATCC
CTGAACAGACGGCCACGTCGGACACGTGCGAGACGGTGAACGAGTCTGCG
ATCTTCGACTACTGCGATTCAGAGGACTTGATGGTGCTCGGCTGGATCCA
CACGCACCCGACACAGACGTGCTTTATGAGCTCGCGCGACCTCCACACAC
ATTGCGGATACCAGGTGATGCTGCCGGAGAGCATTGCGATTGTGTGCGCG
CCCAGCAAGACGCCCGACTGGGGAGTGTTCCGGCTGACGGATCCTCCGGG
GCTGAAGACGGTGCTCAACTGCACGCAGTCGGGACTCTTCCATCCCCATG
GAGAGGCAAACATTTACACAGATGCGCTGCGCCCGGGACATGTATTTGAG
GCAAAAGGATTGGAGTTCGAGACGGTGGATCTGCGCCCCAAGGGGTCTCA
ATTCTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:609339..611045-

>CAN33_51080-T1 ID=CAN33_51080-T1|Name=CAN33_51080-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3300bp|location=Sequence derived from alignment at NKJJ01000020.1:609339..611045- (Aspergillus niger FDAARGOS_311)
GCTCGGATTTACGAACGCGAAAAGCACGAAGAACAAGCCTACCTTTTATT
GTTTCGCCATGCTCAGTTGGTACTTGTCAATTTGGCGGAGCATCCAGAGG
CCAGAGATGAAAAGAACCGGAAAGCTTTGGTGGAAGCCGAAAAGGAGGTC
AAACGAAACCTGAAGGTCCTCGAAGTTCTGAAACCCCGGATCAACAAACG
CTACGAGCGCTATACTCAGTTGATGCGTGAACGGCAAGCTCGCGCACCAG
CAGCGGCGAATAACACTCCCACTTCAACCCAGAGACCCCCTCAAGATCCC
GCCCTCGCAGGGGTCGTGGAACCTCTGGAAGCAGGAGAGAACAAAGACCT
GGCGGTGCAGCTGGCTCGGACGGAGCTTAGCCGACGAGCAACTGTCCGAA
AGGCTATCCGACAAGCAGGCATAACACCTGAAGAGGAGCAGACTCGTCGG
GCTGCTGGCGTGTGGGGAGACTGGGAGCATGCCCTGCGCAAAGATGGAAC
CGAGGACGATGACTTGAGCCGGCGCATACAGAACGTGAGAATCCAGATGG
ACGATCCGCGGGCGGATCACCGTCCACAGATTGCCACTAAGCCTATGGTC
CGGCCATCTGCCGCAACCTCTTCAACCGGCGCATACAAGTATCCGAGCGT
CCCTCGTCAGAAGCCGCTGGAAGTTCCGTCGGCCGCAAAGGTGGAGCCTG
AGAAGAGGATTGTTCTTCCGCCCAAAGCGCCCGCACTGCCTCCTAAGGAA
ACTTCGTATGTACATGAACTGGCTGGCCTTGAAGGACCTTCACCTCCACC
TCGTCCAGACAAGGTCTCGCCCGCAGCGATCCCGGCTGAGCCTCCTGTGC
TTCCTGGAAAGGTTCCAGCAACCGATGGGTCAGCTGCCAGCCCGAATTTG
GACCCGTCCAGCTATACCTTCAAGCCCTCTGCTTATCTAGAGAACGGAAC
GCCTCTGCGGACGTTGTTCCTGCCACCTGATCTACGCAAGCACTTCATCT
CACTGGTATCCCCGAATACGCAGCGCAATCTAGAGACGTGCGGCATTTTG
TGCGGCACGCTAGTCTCCAACGCCTTGTTCGTTTCGAGGCTGCTCATCCC
TGAACAGACGGCCACGTCGGACACGTGCGAGACGGTGAACGAGTCTGCGA
TCTTCGACTACTGCGATTCAGAGGACTTGATGGTGCTCGGCTGGATCCAC
ACGCACCCGACACAGACGTGCTTTATGAGCTCGCGCGACCTCCACACACA
TTGCGGATACCAGGTGATGCTGCCGGAGAGCATTGCGATTGTGTGCGCGC
CCAGCAAGACGCCCGACTGGGGAGTGTTCCGGCTGACGGATCCTCCGGGG
CTGAAGACGGTGCTCAACTGCACGCAGTCGGGACTCTTCCATCCCCATGG
AGAGGCAAACATTTACACAGATGCGCTGCGCCCGGGACATGTATTTGAGG
CAAAAGGATTGGAGTTCGAGACGGTGGATCTGCGCCCCAAGGGGTCTCAA
TTCTGAATGGCCGCCCATCTACCTCCGGCTACCGGTGCGGGGTCCCCGCA
GAGTGTGGAATCAATCACTCGCATGGCTCAGGATTATGAGTACAACCCGT
CTATACCTCTACGCTACTGGCTGCGAACAGCGTCTACTCTCATGAGAGAG
GCTCGGATTTACGAACGCGAAAAGCACGAAGAACAAGCCTACCTTTTATT
GTTTCGCCATGCTCAGTTGGTACTTGTCAATTTGGCGGAGCATCCAGAGG
CCAGAGATGAAAAGAACCGGAAAGCTTTGGTGGAAGCCGAAAAGGAGGTC
AAACGAAACCTGAAGGTCCTCGAAGTTCTGAAACCCCGGATCAACAAACG
CTACGAGCGCTATACTCAGTTGATGCGTGAACGGCAAGCTCGCGCACCAG
CAGCGGCGAATAACACTCCCACTTCAACCCAGAGACCCCCTCAAGATCCC
GCCCTCGCAGGGGTCGTGGAACCTCTGGAAGCAGGAGAGAACAAAGACCT
GGCGGTGCAGCTGGCTCGGACGGAGCTTAGCCGACGAGCAACTGTCCGAA
AGGCTATCCGACAAGCAGGCATAACACCTGAAGAGGAGCAGACTCGTCGG
GCTGCTGGCGTGTGGGGAGACTGGGAGCATGCCCTGCGCAAAGATGGAAC
CGAGGACGATGACTTGAGCCGGCGCATACAGAACGTGAGAATCCAGATGG
ACGATCCGCGGGCGGATCACCGTCCACAGATTGCCACTAAGCCTATGGTC
CGGCCATCTGCCGCAACCTCTTCAACCGGCGCATACAAGTATCCGAGCGT
CCCTCGTCAGAAGCCGCTGGAAGTTCCGTCGGCCGCAAAGGTGGAGCCTG
AGAAGAGGATTGTTCTTCCGCCCAAAGCGCCCGCACTGCCTCCTAAGGAA
ACTTCGTATGTACATGAACTGGCTGGCCTTGAAGGACCTTCACCTCCACC
TCGTCCAGACAAGGTCTCGCCCGCAGCGATCCCGGCTGAGCCTCCTGTGC
TTCCTGGAAAGGTTCCAGCAACCGATGGGTCAGCTGCCAGCCCGAATTTG
GACCCGTCCAGCTATACCTTCAAGCCCTCTGCTTATCTAGAGAACGGAAC
GCCTCTGCGGACGTTGTTCCTGCCACCTGATCTACGCAAGCACTTCATCT
CACTGGTATCCCCGAATACGCAGCGCAATCTAGAGACGTGCGGCATTTTG
TGCGGCACGCTAGTCTCCAACGCCTTGTTCGTTTCGAGGCTGCTCATCCC
TGAACAGACGGCCACGTCGGACACGTGCGAGACGGTGAACGAGTCTGCGA
TCTTCGACTACTGCGATTCAGAGGACTTGATGGTGCTCGGCTGGATCCAC
ACGCACCCGACACAGACGTGCTTTATGAGCTCGCGCGACCTCCACACACA
TTGCGGATACCAGGTGATGCTGCCGGAGAGCATTGCGATTGTGTGCGCGC
CCAGCAAGACGCCCGACTGGGGAGTGTTCCGGCTGACGGATCCTCCGGGG
CTGAAGACGGTGCTCAACTGCACGCAGTCGGGACTCTTCCATCCCCATGG
AGAGGCAAACATTTACACAGATGCGCTGCGCCCGGGACATGTATTTGAGG
CAAAAGGATTGGAGTTCGAGACGGTGGATCTGCGCCCCAAGGGGTCTCAA
TTCTGAATGGCCGCCCATCTACCTCCGGCTACCGGTGCGGGGTCCCCGCA
GAGTGTGGAATCAATCACTCGCATGGCTCAGGATTATGAGTACAACCCGT
CTATACCTCTACGCTACTGGCTGCGAACAGCGTCTACTCTCATGAGAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51080CAN33_51080Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51080-T1CAN33_51080-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51080-T1.cdsCAN33_51080-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51080-T1.exon2CAN33_51080-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51080-T1.exon1CAN33_51080-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteMEROPS:MER0029722
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR015063
DBxrefInterPro:IPR000555
DBxrefPFAM:PF08969
DBxrefPFAM:PF01398
ProductJAB1/Mov34/MPN/PAD-1 ubiquitin protease family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:609339..611045 -
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