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CAN33_51230-T1, CAN33_51230-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51230-T1
Unique NameCAN33_51230-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:685794..687163+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51230-T1 ID=CAN33_51230-T1|Name=CAN33_51230-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1370bp|location=Sequence derived from alignment at NKJJ01000020.1:685794..687163+ (Aspergillus niger FDAARGOS_311)
ATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAG
CCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGT
CTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGTGGGTT
GGATGGAGGAGCCCCAAAGGTCTCAATCGATGATGATCTATCTCGGATTT
CTGGAGAAGCTATTAATCCGGTGCAGACCCCAAGACGGTTTAGTGTCCCG
TAGGCGGTCTGCAAATCTTCCCCATCACGGGACTTCGGCTTGCCCTGGGG
TGGTCCGGCTCGCTAAGCGTCCCGTTTGGGGTTAGGGCGAGCCGCACCGA
ACACACCTCGCAATTTGTGAGCCTTGTGCGTTGTCCCGTTACCCTATCGA
AGCGACGACAACCACGACAACCCGGACGACTTTTGCGGGTCATACCTCCC
TTCCTTCGACTTGTTTGCGTTGCCCGCTGCTGCTCAGAGAAACGCCGTCA
GAATGCCTTCGGAACAAGGTCACAGACGTGAGTGCCATCATTTTCCGGAT
ATCAGACATGTGTGCGCGATGGTTGGAATATGGGGATGCCGGAGGATAGA
TGGGAATTTGCGGGCGCAACCTGGGCGAAGTGCTGAATGAAATGCTAACT
CGAGATTTTTGCGAAATATAGTCTATGTCAAGTAAGTTTACCACAAACCG
TCCGCCGTCGAATCCGCGCACATTCCGGATATGAATATCAAAAATATCAA
AATACATGTCGGGACATCAGAGATACGGGCCAAGCGAAGGAATGCAACGA
GAACAGACCGGTTAATACGAATTCTTTCTACAGGGGTCGCCACGTGAGCT
ACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGGTACTTGCGATCC
GCACCGATATCGATATAGAGGAACAAGGGAATCTGACACATGGGTTATCT
AGTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAAGTGAGT
AGCGAACGGGTTCGGAATGGGAATATCAGAACACACAGCTAAGACGACAT
TTTTTTACAGCTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCC
AAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTAC
CCGTCCCCACGGTATGTGATGCTCAGCTCCAATGCGCGATGATTACGATG
GAATATTTCAATACTATCGGTGATTGTTGGAACCGAGAACGGCGGGAAAC
TAACGATATTTCCTCATGAACAGGTAACTCCGGTGTTGTCCGTGCTCAGT
TCCGCCACAACCTCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTATGC
TGTACCCCTCCAACATCTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:685794..687163+

>CAN33_51230-T1 ID=CAN33_51230-T1|Name=CAN33_51230-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2055bp|location=Sequence derived from alignment at NKJJ01000020.1:685794..687163+ (Aspergillus niger FDAARGOS_311)
ATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAG
CCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGT
CTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGGGTCGC
CACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGTCT
GATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAACTTCTACCTGG
GCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCC
AACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGTTCCGCCACA
ACCTCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCT
CCAACATCTAAATGGGTGGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTG
GGGCGCTCTAGCCAAAAGCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGG
TAGCCAGGAGTCTTCGGACTACAGTAGCCCGGACGGCAAAATTGGCCAGG
TGGGGGGTCGCCACGTGAGCTACCAGCGCTCCAAGCGTACCGTCAACCCC
AACACCAGTCTGATCAAGATCGACGGTGTTGAGAGCACCGAGGCCGCAAA
CTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGG
TCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTACCCGTCCCCAC
GTTCCGCCACAACCTCCCCCCAAGACCTTCGGTGCTACCGTCCGTGTTAT
GCTGTACCCCTCCAACATCTAAATGGGTGGAAAGAAATCCGCAAGCTGTT
TTGTCAGCTTGGGGCGCTCTAGCCAAAAGCTCTCTCCGCCGCTGCAGAGG
GGACCGGCGGGTAGCCAGGAGTCTTCGGACTACAGTAGCCCGGACGGCAA
AATTGGCCAGGTGGGGGGTCGCCACGTGAGCTACCAGCGCTCCAAGCGTA
CCGTCAACCCCAACACCAGTCTGATCAAGATCGACGGTGTTGAGAGCACC
GAGGCCGCAAACTTCTACCTGGGCAAGAAGGTTGCTTTCGTCTACCGGGC
CAAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTGGGGCAAGGTTA
CCCGTCCCCACGTTCCGCCACAACCTCCCCCCAAGACCTTCGGTGCTACC
GTCCGTGTTATGCTGTACCCCTCCAACATCTAAATGGGTGGAAAGAAATC
CGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCAAAAGCTCTCTCCGC
CGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTTCGGACTACAGTAGC
CCGGACGGCAAAATTGGCCAGGTGGGGGGTCGCCACGTGAGCTACCAGCG
CTCCAAGCGTACCGTCAACCCCAACACCAGTCTGATCAAGATCGACGGTG
TTGAGAGCACCGAGGCCGCAAACTTCTACCTGGGCAAGAAGGTTGCTTTC
GTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCCAACATCCGGGTCATCTG
GGGCAAGGTTACCCGTCCCCACGTTCCGCCACAACCTCCCCCCAAGACCT
TCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACATCTAAATGGGT
GGAAAGAAATCCGCAAGCTGTTTTGTCAGCTTGGGGCGCTCTAGCCAAAA
GCTCTCTCCGCCGCTGCAGAGGGGACCGGCGGGTAGCCAGGAGTCTTCGG
ACTACAGTAGCCCGGACGGCAAAATTGGCCAGGTGGGGGGTCGCCACGTG
AGCTACCAGCGCTCCAAGCGTACCGTCAACCCCAACACCAGTCTGATCAA
GATCGACGGTGTTGAGAGCACCGAGGCCGCAAACTTCTACCTGGGCAAGA
AGGTTGCTTTCGTCTACCGGGCCAAGCGTGAGGTCCGGGGCTCCAACATC
CGGGTCATCTGGGGCAAGGTTACCCGTCCCCACGTTCCGCCACAACCTCC
CCCCAAGACCTTCGGTGCTACCGTCCGTGTTATGCTGTACCCCTCCAACA
TCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL33BCAN33_51230Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51230-T1CAN33_51230-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51230-T1.exon1CAN33_51230-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_51230-T1.exon2CAN33_51230-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51230-T1.exon3CAN33_51230-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_51230-T1.exon4CAN33_51230-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_51230-T1.exon5CAN33_51230-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51230-T1.cdsCAN33_51230-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR001780
DBxrefInterPro:IPR038661
DBxrefPFAM:PF01247
Product60S ribosomal protein L33B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:685794..687163 +
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