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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:716575..717146+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51300-T1 ID=CAN33_51300-T1|Name=CAN33_51300-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=572bp|location=Sequence derived from alignment at NKJJ01000020.1:716575..717146+ (Aspergillus niger FDAARGOS_311)
ATGAACACAACACGTCCTCTTCAGCGATTAGCTCGCGTTGTTGGCCGTCA
GACTGTCAAGCCGGCGCTGTCGCGCAGCTTCGCCAGCTCTGTTCCGACGC
TATCAGGTGCCCGGTCTCCGCGGGGGTGGACGCCGACGCCGTTTGTTACT
GAGACCGTGGTAAGTCTGCACATTCTTTCTTATAGTATATGCATAGGTGA
GGGTATACTAACAGAAATCAGGGAGGAGGATGGCACACATGTACGTTTAC
AGCAGCAACCCCCGTACCTTACCGCAACTAATTAACCAACTACACTCCCA
TCACAGACGACATCTTCTCTCGTCTCCTCAAGGTACATACACCCACCCAC
CCACCTTCCACCCCATTCCATACTCATAACCTATAGGAACGAATCATTTG
CCTGAACGGCGAAGTCGACGAGACCATGTCCGCCAGCATCGTCGCCCAAC
TCCTCTTCCTCGAAGCCGACAACCCGCAAAAGCCCATCCACCTCTACATC
AACTCCCCCGGAGGCTCCGTGACCGCCGGCCTCGCCATCTACGACACAAT
GACTTACATCGCCTCCCCGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:716575..717146+ >CAN33_51300-T1 ID=CAN33_51300-T1|Name=CAN33_51300-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1560bp|location=Sequence derived from alignment at NKJJ01000020.1:716575..717146+ (Aspergillus niger FDAARGOS_311)
ATGAACACAACACGTCCTCTTCAGCGATTAGCTCGCGTTGTTGGCCGTCA
GACTGTCAAGCCGGCGCTGTCGCGCAGCTTCGCCAGCTCTGTTCCGACGC
TATCAGGTGCCCGGTCTCCGCGGGGGTGGACGCCGACGCCGTTTGTTACT
GAGACCGTGGGAGGAGGATGGCACACATACGACATCTTCTCTCGTCTCCT
CAAGGAACGAATCATTTGCCTGAACGGCGAAGTCGACGAGACCATGTCCG
CCAGCATCGTCGCCCAACTCCTCTTCCTCGAAGCCGACAACCCGCAAAAG
CCCATCCACCTCTACATCAACTCCCCCGGAGGCTCCGTGACCGCCGGCCT
CGCCATCTACGACACAATGACTTACATCGCCTCCCCGTGAATGAACACAA
CACGTCCTCTTCAGCGATTAGCTCGCGTTGTTGGCCGTCAGACTGTCAAG
CCGGCGCTGTCGCGCAGCTTCGCCAGCTCTGTTCCGACGCTATCAGGTGC
CCGGTCTCCGCGGGGGTGGACGCCGACGCCGTTTGTTACTGAGACCGTGG
GAGGAGGATGGCACACATACGACATCTTCTCTCGTCTCCTCAAGGAACGA
ATCATTTGCCTGAACGGCGAAGTCGACGAGACCATGTCCGCCAGCATCGT
CGCCCAACTCCTCTTCCTCGAAGCCGACAACCCGCAAAAGCCCATCCACC
TCTACATCAACTCCCCCGGAGGCTCCGTGACCGCCGGCCTCGCCATCTAC
GACACAATGACTTACATCGCCTCCCCGTGAATGAACACAACACGTCCTCT
TCAGCGATTAGCTCGCGTTGTTGGCCGTCAGACTGTCAAGCCGGCGCTGT
CGCGCAGCTTCGCCAGCTCTGTTCCGACGCTATCAGGTGCCCGGTCTCCG
CGGGGGTGGACGCCGACGCCGTTTGTTACTGAGACCGTGGGAGGAGGATG
GCACACATACGACATCTTCTCTCGTCTCCTCAAGGAACGAATCATTTGCC
TGAACGGCGAAGTCGACGAGACCATGTCCGCCAGCATCGTCGCCCAACTC
CTCTTCCTCGAAGCCGACAACCCGCAAAAGCCCATCCACCTCTACATCAA
CTCCCCCGGAGGCTCCGTGACCGCCGGCCTCGCCATCTACGACACAATGA
CTTACATCGCCTCCCCGTGAATGAACACAACACGTCCTCTTCAGCGATTA
GCTCGCGTTGTTGGCCGTCAGACTGTCAAGCCGGCGCTGTCGCGCAGCTT
CGCCAGCTCTGTTCCGACGCTATCAGGTGCCCGGTCTCCGCGGGGGTGGA
CGCCGACGCCGTTTGTTACTGAGACCGTGGGAGGAGGATGGCACACATAC
GACATCTTCTCTCGTCTCCTCAAGGAACGAATCATTTGCCTGAACGGCGA
AGTCGACGAGACCATGTCCGCCAGCATCGTCGCCCAACTCCTCTTCCTCG
AAGCCGACAACCCGCAAAAGCCCATCCACCTCTACATCAACTCCCCCGGA
GGCTCCGTGACCGCCGGCCTCGCCATCTACGACACAATGACTTACATCGC
CTCCCCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004252 | serine-type endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0006046 |
| DBxref | InterPro:IPR029045 |
| DBxref | InterPro:IPR023562 |
| DBxref | InterPro:IPR001907 |
| Product | Clp protease family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:716575..717146 + |
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