|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:830529..831642- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_5145-T1 ID=CAN33_5145-T1|Name=CAN33_5145-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1114bp|location=Sequence derived from alignment at NKJJ01000019.1:830529..831642- (Aspergillus niger FDAARGOS_311)
ATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATCCCCTGCCCC
GGGGAAGCTTCAGTCCATCCAGACACAGCAGCCTCAATATGGTGACTTCC
GTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGCGTGCTGAGC
AAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTGGCTCGAATC
ATTCGGCCTTGGCTTTGATCGCAACGACAAGTCCACCTGGAAGAAGGAAA
ACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTCTCTGCTGCG
CACGAGAAGTATGTCTGGGACGTCCGGTGGTAAGTCACGTCTCTCTTCCC
TCCTCTCTAGAGATCCATCTTGCTAAACCATGGCTACAGCGAGCCAGACG
TCATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGAGCTCGTCGTCTCC
TTCGACACAGTGAACATCACCCTCCCTCAATCCATTGTAGGCGCCTACGA
TTCTCAGCCCTGGCCCCACTGCGACCAAGCGCCCGAACGCAAAGGTCTGG
TCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGGCCCCGATGACGGT
GGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCAATTCTTCGA
AGAGAACCCGGTCACTGGCCCCACGCCCTGGCGCACCGCCAAACACAAGG
ACTTCCATCCCTTCCATGACAAGGATTTAGACTGGTACCGCGAGCGTGGG
TGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTGATCCTTTGGGA
CTCCAGACAGATGCACTGGGCTCAGTTCGGGACCTCGGATCTGGTGCGCA
CCATTGTTTATGCGACATATACGCCGGCGGCGTGGATGAGTGAGGAGGAT
CGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACAACTACACACTG
GCCGCATACGAACTTGTTCACACATGGGAAGGCGATGGTGAAAGTGGATG
GAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACCTCTTACCAAGCCG
GTGAGGAGTGAGAGACTGTTGCAGTTGGCAGGTGTGAAGCCGTACTAGTG
ATCTGTAGTATTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:830529..831642- >CAN33_5145-T1 ID=CAN33_5145-T1|Name=CAN33_5145-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2988bp|location=Sequence derived from alignment at NKJJ01000019.1:830529..831642- (Aspergillus niger FDAARGOS_311)
TATTAGCGAGCCAGACGTCATTGCTCCCTTCGCCAAACTCTGGGGCACCG
ACGAGCTCGTCGTCTCCTTCGACACAGTGAACATCACCCTCCCTCAATCC
ATTGTAGGCGCCTACGATTCTCAGCCCTGGCCCCACTGCGACCAAGCGCC
CGAACGCAAAGGTCTGGTCTGTGTCCAGGGCATTGTCAATCTCTCTAACT
CGGGCCCCGATGACGGTGGACTCATTGTAATGAAGGGTTCCGCGCCGCTC
TTTGACCAATTCTTCGAAGAGAACCCGGTCACTGGCCCCACGCCCTGGCG
CACCGCCAAACACAAGGACTTCCATCCCTTCCATGACAAGGATTTAGACT
GGTACCGCGAGCGTGGGTGCGAGTTGATCAAGGTCTGTGCTGAACCAGGA
GATTTGATCCTTTGGGACTCCAGACAGATGCACTGGGCTCAGTTCGGGAC
CTCGGATCTGGTGCGCACCATTGTTTATGCGACATATACGCCGGCGGCGT
GGATGAGTGAGGAGGATCGGCAGAAGAAGAAAGAATTATTCGAGGCATAT
GAGACAACTACACACTGGCCGCATACGAACTTGTTCACACATGGGAAGGC
GATGGTGAAAGTGGATGGAGAGGAAGTGGTGGATCCGTTGGAGAGGGACG
AACCTCTTACCAAGCCGATGGCACCCTCCCGTGTCGACACTCCGGAGCCC
ATCCCATCCCCTGCCCCGGGGAAGCTTCAGTCCATCCAGACACAGCAGCC
TCAATATGGTGACTTCCGTGATGACTTCTTTCGTGACGGTTACGCTGTCA
TCAAAGGCGTGCTGAGCAAAGAGCGCGCCAGCGAATACCAAAGCGAAGCC
CTGACCTGGCTCGAATCATTCGGCCTTGGCTTTGATCGCAACGACAAGTC
CACCTGGAAGAAGGAAAACCTCCCACAGAGCTGGAAAGGCGGCATGTACC
TGCACTTCTCTGCTGCGCACGAGAAGTATGTCTGGGACGTCCGGTGTATT
AGCGAGCCAGACGTCATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGA
GCTCGTCGTCTCCTTCGACACAGTGAACATCACCCTCCCTCAATCCATTG
TAGGCGCCTACGATTCTCAGCCCTGGCCCCACTGCGACCAAGCGCCCGAA
CGCAAAGGTCTGGTCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGG
CCCCGATGACGGTGGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTG
ACCAATTCTTCGAAGAGAACCCGGTCACTGGCCCCACGCCCTGGCGCACC
GCCAAACACAAGGACTTCCATCCCTTCCATGACAAGGATTTAGACTGGTA
CCGCGAGCGTGGGTGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATT
TGATCCTTTGGGACTCCAGACAGATGCACTGGGCTCAGTTCGGGACCTCG
GATCTGGTGCGCACCATTGTTTATGCGACATATACGCCGGCGGCGTGGAT
GAGTGAGGAGGATCGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGA
CAACTACACACTGGCCGCATACGAACTTGTTCACACATGGGAAGGCGATG
GTGAAAGTGGATGGAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACC
TCTTACCAAGCCGATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCC
CATCCCCTGCCCCGGGGAAGCTTCAGTCCATCCAGACACAGCAGCCTCAA
TATGGTGACTTCCGTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAA
AGGCGTGCTGAGCAAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGA
CCTGGCTCGAATCATTCGGCCTTGGCTTTGATCGCAACGACAAGTCCACC
TGGAAGAAGGAAAACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCA
CTTCTCTGCTGCGCACGAGAAGTATGTCTGGGACGTCCGGTGTATTAGCG
AGCCAGACGTCATTGCTCCCTTCGCCAAACTCTGGGGCACCGACGAGCTC
GTCGTCTCCTTCGACACAGTGAACATCACCCTCCCTCAATCCATTGTAGG
CGCCTACGATTCTCAGCCCTGGCCCCACTGCGACCAAGCGCCCGAACGCA
AAGGTCTGGTCTGTGTCCAGGGCATTGTCAATCTCTCTAACTCGGGCCCC
GATGACGGTGGACTCATTGTAATGAAGGGTTCCGCGCCGCTCTTTGACCA
ATTCTTCGAAGAGAACCCGGTCACTGGCCCCACGCCCTGGCGCACCGCCA
AACACAAGGACTTCCATCCCTTCCATGACAAGGATTTAGACTGGTACCGC
GAGCGTGGGTGCGAGTTGATCAAGGTCTGTGCTGAACCAGGAGATTTGAT
CCTTTGGGACTCCAGACAGATGCACTGGGCTCAGTTCGGGACCTCGGATC
TGGTGCGCACCATTGTTTATGCGACATATACGCCGGCGGCGTGGATGAGT
GAGGAGGATCGGCAGAAGAAGAAAGAATTATTCGAGGCATATGAGACAAC
TACACACTGGCCGCATACGAACTTGTTCACACATGGGAAGGCGATGGTGA
AAGTGGATGGAGAGGAAGTGGTGGATCCGTTGGAGAGGGACGAACCTCTT
ACCAAGCCGATGGCACCCTCCCGTGTCGACACTCCGGAGCCCATCCCATC
CCCTGCCCCGGGGAAGCTTCAGTCCATCCAGACACAGCAGCCTCAATATG
GTGACTTCCGTGATGACTTCTTTCGTGACGGTTACGCTGTCATCAAAGGC
GTGCTGAGCAAAGAGCGCGCCAGCGAATACCAAAGCGAAGCCCTGACCTG
GCTCGAATCATTCGGCCTTGGCTTTGATCGCAACGACAAGTCCACCTGGA
AGAAGGAAAACCTCCCACAGAGCTGGAAAGGCGGCATGTACCTGCACTTC
TCTGCTGCGCACGAGAAGTATGTCTGGGACGTCCGGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | Phytanoyl-CoA dioxygenase (PhyH) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:830529..831642 - |
|
