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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:825550..826770- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_51475-T1 ID=CAN33_51475-T1|Name=CAN33_51475-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1221bp|location=Sequence derived from alignment at NKJJ01000020.1:825550..826770- (Aspergillus niger FDAARGOS_311)
ATGCTCTCACCCACGAAAGCCTTCGGCAGCAGCCCATCGCCTCACTCGCC
TCGCACGGCGGTTCCTCTGCGGGGTCTCTTCCTCGATGGCGTTTGGCGCT
GCAACTGTCCAGAGCGTCCCCCAGCCGCGAAATTCCAAACCAAGAACCAC
GGTGTGAACCATGGACGATGGTGTACGCGGTCCATCCCTTCTTGATCTAC
CAAACGTACAAGAAAAGTCAATCGCAACCTGAATCCCTAGCTAACCACTG
AACCCTGCACCCCGCCCCTCACAGTCTACGTCTGCCAAAAGCCCCAAGAG
AAACGCTGTCGCTTCTTCCTCTGGGCCAGCGACGCCGAAGTCCGCGAAAA
GCACGCCGTCTTGACCAACTCTCGCACAGAGCCAGCGGCGGATTCCTTCT
CTTCTGCTACCAGTTCTGCCACTATTGCCACCCCCACCCCCGAGACACCC
ACCAAGAAACCACGCCTATTCGAGACGGGCCTTCTAACCCCGCAGACTGA
TCGTACGGTAAGATTTGGAGATACAGGCTTGGACAATAGTGGGGCACGGG
GGAAGGGAGGACAGTTGAGTGCGACCATGCCTCCGCGAAGCGCCAAGGCC
CGCATGATGGCTGAAGACCTTGATGAGTTCGAATGGGATATCTCGGATGA
TACGGCGGTGGGGAATCTGCTTGGTTCTCAAGAACAGAGGCAGCAACAGG
CTGCTTCTGCGACTGCTACTGCGCCAATGCGACAGCCGGATTTCGGTCCT
CCCAAGACGCCATCCCGGGACGCAGTTGGAGCTTCTGCGCCGGAGAAGAG
AAAGCTCGATGATATATCGGATGTGGGTGCGCAGGATGGTTCGAAGACAG
AGGCTTTTACGCCAACTTCGTTGGCTCGATCATTTACGGATCGGGCGGTG
TCTTTTTCTTCTACTGTGCCGTCGTCGTCGTTGGAGTTTTCGAAGACGCC
TACGCCGGTGAGGTTTGTTGGGGCTAGTCCTGCTACGGGTGGAGAGAAGC
CTTCGTCTGATCTGGCAGCGCAGGCTGTTGAGATTCTGGATAAGAATAGG
GTGGTGATGCCGGAGAAAGCGAAGGGTGAGTTGATGGATCTCTTGCAGAA
GTATGAGTTGAAGGTGAAAGGTATTGCCCGGGGACGGGACATTTCGAGGA
TTGCGTTGAAGAAGAAGGACGACCAGATTAAAGCGCTGAATGAGCGAATC
TCTATGCTGGAAAGGAGGTAG back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:825550..826770- >CAN33_51475-T1 ID=CAN33_51475-T1|Name=CAN33_51475-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3060bp|location=Sequence derived from alignment at NKJJ01000020.1:825550..826770- (Aspergillus niger FDAARGOS_311)
ACGCCATCCCGGGACGCAGTTGGAGCTTCTGCGCCGGAGAAGAGAAAGCT
CGATGATATATCGGATGTGGGTGCGCAGGATGGTTCGAAGACAGAGGCTT
TTACGCCAACTTCGTTGGCTCGATCATTTACGGATCGGGCGGTGTCTTTT
TCTTCTACTGTGCCGTCGTCGTCGTTGGAGTTTTCGAAGACGCCTACGCC
GGTGAGGTTTGTTGGGGCTAGTCCTGCTACGGGTGGAGAGAAGCCTTCGT
CTGATCTGGCAGCGCAGGCTGTTGAGATTCTGGATAAGAATAGGGTGGTG
ATGCCGGAGAAAGCGAAGGGTGAGTTGATGGATCTCTTGCAGAAGTATGA
GTTGAAGGTGAAAGGTATTGCCCGGGGACGGGACATTTCGAGGATTGCGT
TGAAGAAGAAGGACGACCAGATTAAAGCGCTGAATGAGCGAATCTCTATG
CTGGAAAGGAGGTAGTCTACGTCTGCCAAAAGCCCCAAGAGAAACGCTGT
CGCTTCTTCCTCTGGGCCAGCGACGCCGAAGTCCGCGAAAAGCACGCCGT
CTTGACCAACTCTCGCACAGAGCCAGCGGCGGATTCCTTCTCTTCTGCTA
CCAGTTCTGCCACTATTGCCACCCCCACCCCCGAGACACCCACCAAGAAA
CCACGCCTATTCGAGACGGGCCTTCTAACCCCGCAGACTGATCGTACGGT
AAGATTTGGAGATACAGGCTTGGACAATAGTGGGGCACGGGGGAAGGGAG
GACAGTTGAGTGCGACCATGCCTCCGCGAAGCGCCAAGGCCCGCATGATG
GCTGAAGACCTTGATGAGTTCGAATGGGATATCTCGGATGATACGGCGAT
GCTCTCACCCACGAAAGCCTTCGGCAGCAGCCCATCGCCTCACTCGCCTC
GCACGGCGGTTCCTCTGCGGGGTCTCTTCCTCGATGGCGTTTGGCGCTGC
AACTGTCCAGAGCGTCCCCCAGCCGCGAAATTCCAAACCAAGAACCACGG
TGTGAACCATGGACGATGGTACGCCATCCCGGGACGCAGTTGGAGCTTCT
GCGCCGGAGAAGAGAAAGCTCGATGATATATCGGATGTGGGTGCGCAGGA
TGGTTCGAAGACAGAGGCTTTTACGCCAACTTCGTTGGCTCGATCATTTA
CGGATCGGGCGGTGTCTTTTTCTTCTACTGTGCCGTCGTCGTCGTTGGAG
TTTTCGAAGACGCCTACGCCGGTGAGGTTTGTTGGGGCTAGTCCTGCTAC
GGGTGGAGAGAAGCCTTCGTCTGATCTGGCAGCGCAGGCTGTTGAGATTC
TGGATAAGAATAGGGTGGTGATGCCGGAGAAAGCGAAGGGTGAGTTGATG
GATCTCTTGCAGAAGTATGAGTTGAAGGTGAAAGGTATTGCCCGGGGACG
GGACATTTCGAGGATTGCGTTGAAGAAGAAGGACGACCAGATTAAAGCGC
TGAATGAGCGAATCTCTATGCTGGAAAGGAGGTAGTCTACGTCTGCCAAA
AGCCCCAAGAGAAACGCTGTCGCTTCTTCCTCTGGGCCAGCGACGCCGAA
GTCCGCGAAAAGCACGCCGTCTTGACCAACTCTCGCACAGAGCCAGCGGC
GGATTCCTTCTCTTCTGCTACCAGTTCTGCCACTATTGCCACCCCCACCC
CCGAGACACCCACCAAGAAACCACGCCTATTCGAGACGGGCCTTCTAACC
CCGCAGACTGATCGTACGGTAAGATTTGGAGATACAGGCTTGGACAATAG
TGGGGCACGGGGGAAGGGAGGACAGTTGAGTGCGACCATGCCTCCGCGAA
GCGCCAAGGCCCGCATGATGGCTGAAGACCTTGATGAGTTCGAATGGGAT
ATCTCGGATGATACGGCGATGCTCTCACCCACGAAAGCCTTCGGCAGCAG
CCCATCGCCTCACTCGCCTCGCACGGCGGTTCCTCTGCGGGGTCTCTTCC
TCGATGGCGTTTGGCGCTGCAACTGTCCAGAGCGTCCCCCAGCCGCGAAA
TTCCAAACCAAGAACCACGGTGTGAACCATGGACGATGGTACGCCATCCC
GGGACGCAGTTGGAGCTTCTGCGCCGGAGAAGAGAAAGCTCGATGATATA
TCGGATGTGGGTGCGCAGGATGGTTCGAAGACAGAGGCTTTTACGCCAAC
TTCGTTGGCTCGATCATTTACGGATCGGGCGGTGTCTTTTTCTTCTACTG
TGCCGTCGTCGTCGTTGGAGTTTTCGAAGACGCCTACGCCGGTGAGGTTT
GTTGGGGCTAGTCCTGCTACGGGTGGAGAGAAGCCTTCGTCTGATCTGGC
AGCGCAGGCTGTTGAGATTCTGGATAAGAATAGGGTGGTGATGCCGGAGA
AAGCGAAGGGTGAGTTGATGGATCTCTTGCAGAAGTATGAGTTGAAGGTG
AAAGGTATTGCCCGGGGACGGGACATTTCGAGGATTGCGTTGAAGAAGAA
GGACGACCAGATTAAAGCGCTGAATGAGCGAATCTCTATGCTGGAAAGGA
GGTAGTCTACGTCTGCCAAAAGCCCCAAGAGAAACGCTGTCGCTTCTTCC
TCTGGGCCAGCGACGCCGAAGTCCGCGAAAAGCACGCCGTCTTGACCAAC
TCTCGCACAGAGCCAGCGGCGGATTCCTTCTCTTCTGCTACCAGTTCTGC
CACTATTGCCACCCCCACCCCCGAGACACCCACCAAGAAACCACGCCTAT
TCGAGACGGGCCTTCTAACCCCGCAGACTGATCGTACGGTAAGATTTGGA
GATACAGGCTTGGACAATAGTGGGGCACGGGGGAAGGGAGGACAGTTGAG
TGCGACCATGCCTCCGCGAAGCGCCAAGGCCCGCATGATGGCTGAAGACC
TTGATGAGTTCGAATGGGATATCTCGGATGATACGGCGATGCTCTCACCC
ACGAAAGCCTTCGGCAGCAGCCCATCGCCTCACTCGCCTCGCACGGCGGT
TCCTCTGCGGGGTCTCTTCCTCGATGGCGTTTGGCGCTGCAACTGTCCAG
AGCGTCCCCCAGCCGCGAAATTCCAAACCAAGAACCACGGTGTGAACCAT
GGACGATGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR010666 |
| DBxref | PFAM:PF06839 |
| Product | GRF zinc finger family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:825550..826770 - |
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