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CAN33_5170-T1, CAN33_5170-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5170-T1
Unique NameCAN33_5170-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:840175..841057-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5170-T1 ID=CAN33_5170-T1|Name=CAN33_5170-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=883bp|location=Sequence derived from alignment at NKJJ01000019.1:840175..841057- (Aspergillus niger FDAARGOS_311)
ATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCA
ACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCA
ATCAAAGCGATCCTCTCCCCTCCTGGTATATATACCCCCCAATGCCCACT
CCATCCAGCCCACCCGGGTCAACCTTACTGATATGATGATACGGACAGGA
CATCCCTCCAATCCCAAGCAACCATCATCTCCAACAACCTCCTCACCATC
TCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAACATCGTCGCCTA
CCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCTCG
AGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAGGATTGGGTAGCG
CGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCCGG
AGCACTGGGACAATACCAGACCAGCAGTGGACAGAGATTATTGAGTGATG
ATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGGAG
GCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAGAT
GGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGATG
ATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATGAG
ATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTGGA
GTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCGG
GGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTTC
ATGACTACGGGGGCTGTGCCGGGACAGCGGTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:840175..841057-

>CAN33_5170-T1 ID=CAN33_5170-T1|Name=CAN33_5170-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2079bp|location=Sequence derived from alignment at NKJJ01000019.1:840175..841057- (Aspergillus niger FDAARGOS_311)
TTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCGGG
GGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTTCA
TGACTACGGGGGCTGTGCCGGGACAGCGGTGAGACATCCCTCCAATCCCA
AGCAACCATCATCTCCAACAACCTCCTCACCATCTCCGACCACCTCTCCG
ATAACCGCGACCTCCTATCCAACATCGTCGCCTACCCCGACGCATCTTAT
CCGTCGCGCGTCCCCGCTAATAACGTCGCCCTCGAGCAAGTCCTGCGCAC
GAAACTAGATCCCCGCGTTGAGGATTGGGTAGCGCGCGGTCGTCGCGCCG
GGGCGCCAACTACTTCTTCTGATGCTGGAGCCGGAGCACTGGGACAATAC
CAGACCAGCAGTGGACAGAGATTATTGAGTGATGATGCGATTGCTGAATT
GTGGGATTGGGCGCCTGTCGCGGCGAATGAGGAGGCCAGGAAGAGGAATT
GGGGCGGCAATTATACGTTGGAGGAGCGGGAGATGGGGATTGAGAATGTA
GTTACGGGGTTGAGCAGGATGTCCTCCCTCAACCAAGACCAAATCAAAAC
CCTCGAACAATCCCGCCAACGCCTCATCCAACTCACCCATTCCCTCGCCT
CTCTCATAACCAGTCTCAATCAAAGCGATCCTCTCCCCTCCTGTTCGATA
TTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCGGGGGCTAAG
GTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTTCATGACTAC
GGGGGCTGTGCCGGGACAGCGGTGAGACATCCCTCCAATCCCAAGCAACC
ATCATCTCCAACAACCTCCTCACCATCTCCGACCACCTCTCCGATAACCG
CGACCTCCTATCCAACATCGTCGCCTACCCCGACGCATCTTATCCGTCGC
GCGTCCCCGCTAATAACGTCGCCCTCGAGCAAGTCCTGCGCACGAAACTA
GATCCCCGCGTTGAGGATTGGGTAGCGCGCGGTCGTCGCGCCGGGGCGCC
AACTACTTCTTCTGATGCTGGAGCCGGAGCACTGGGACAATACCAGACCA
GCAGTGGACAGAGATTATTGAGTGATGATGCGATTGCTGAATTGTGGGAT
TGGGCGCCTGTCGCGGCGAATGAGGAGGCCAGGAAGAGGAATTGGGGCGG
CAATTATACGTTGGAGGAGCGGGAGATGGGGATTGAGAATGTAGTTACGG
GGTTGAGCAGGATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAA
CAATCCCGCCAACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCAT
AACCAGTCTCAATCAAAGCGATCCTCTCCCCTCCTGTTCGATATTGCTGC
TGCGAATACTGGGTCTGGGGCTAATGCTGGTGCGGGGGCTAAGGTGGTTG
CGCCTGTGGTGCCATTGGATGAGATTCTGAGGTTCATGACTACGGGGGCT
GTGCCGGGACAGCGGTGAGACATCCCTCCAATCCCAAGCAACCATCATCT
CCAACAACCTCCTCACCATCTCCGACCACCTCTCCGATAACCGCGACCTC
CTATCCAACATCGTCGCCTACCCCGACGCATCTTATCCGTCGCGCGTCCC
CGCTAATAACGTCGCCCTCGAGCAAGTCCTGCGCACGAAACTAGATCCCC
GCGTTGAGGATTGGGTAGCGCGCGGTCGTCGCGCCGGGGCGCCAACTACT
TCTTCTGATGCTGGAGCCGGAGCACTGGGACAATACCAGACCAGCAGTGG
ACAGAGATTATTGAGTGATGATGCGATTGCTGAATTGTGGGATTGGGCGC
CTGTCGCGGCGAATGAGGAGGCCAGGAAGAGGAATTGGGGCGGCAATTAT
ACGTTGGAGGAGCGGGAGATGGGGATTGAGAATGTAGTTACGGGGTTGAG
CAGGATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCC
GCCAACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGT
CTCAATCAAAGCGATCCTCTCCCCTCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MED8CAN33_5170Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5170-T1CAN33_5170-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5170-T1.cdsCAN33_5170-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5170-T1.exon3CAN33_5170-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_5170-T1.exon2CAN33_5170-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_5170-T1.exon1CAN33_5170-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR019364
DBxrefPFAM:PF10232
Productmediator of RNA polymerase II transcription subunit 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:840175..841057 -
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