You are here

Home

CAN33_51745-T1, CAN33_51745-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51745-T1
Unique NameCAN33_51745-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1009304..1010271-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51745-T1 ID=CAN33_51745-T1|Name=CAN33_51745-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=968bp|location=Sequence derived from alignment at NKJJ01000020.1:1009304..1010271- (Aspergillus niger FDAARGOS_311)
ATGACCCAAAGACAACAAACGTGGCTAATAACCGGCTCCTCCTCCGGCCT
CGGCGCCTCCCTCGCCATCGCCGCCCTAAAAGCAGGCCACAAAGTCCTCG
CCACAGCGCGCAACCCCACCACCGCATCAGCCCAAAACCCTCAAATCACC
TCCCTGGGAGGAATCTGGATCTCCCTCGACGTGAACGATCCCTCCACCCC
CAGCAAGATCCAATCAGCCATCAACGCGCACGCCGACGGCATCATCGACG
TAGTCGTCAACAACGCAGGTTACTCCCTCCTAGGAAGTATCGAGGACATG
AGCGAATCGGAGATTGAATCCCAATTCAGTACGAATGTGTATGGGCCGAT
ACGGGTATTGAAAGGTGTGCTGCCCTTCATGAGAAAGAGGAGGGCAGGCA
CGGTCGTCAATATTAGTAGTAGTGCCGGTGTGGATGGGGCGCCGGGGTGT
GCGGTTTATGCGGGGTCGAAGTTTGCGTTGGAAGGTCAGTCATCTATTTA
CCTCTTCATATCTGTGTGTTTATGTGGGGAATGGGTATATGCTGATGTTG
GGTGATGGTGGTGGTGCTGGGAGTAGGTATGACAGAGTCTTTATCGAAAG
AACTCCATCCCTTTGGGATCCGCGTCCTGCTTGTTGAACCGGGGTATTTT
CGGACCAAGTTCTTCAGTGCGTTTGTGCAGCCTGCTGCGGGACTTACTGA
GGATTATGTGGGGACGCCGGTGGAGGCGGCGCTGAAGTTGATTAAGTCGA
AGGATGGGAATCAGGAGGGGGATCCGGAGAAGGCGGCGCGGAGGATTCTG
GAGGTTGTGATGGGGACGGGGATGGCTGCTGATATTACTGACAAGGGGTT
TCTGAGGGTGGTGTTGGGGCCGGATTGTTGGAAGAGGTTTTCGGGGAAGA
TTGACGGGGTGAGGGAGAATTTGGAGACCATGAGGGGGATTGCGCATTCG
ACTAGTTTTGAGGAGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:1009304..1010271-

>CAN33_51745-T1 ID=CAN33_51745-T1|Name=CAN33_51745-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1734bp|location=Sequence derived from alignment at NKJJ01000020.1:1009304..1010271- (Aspergillus niger FDAARGOS_311)
AGTCTTTATCGAAAGAACTCCATCCCTTTGGGATCCGCGTCCTGCTTGTT
GAACCGGGGTATTTTCGGACCAAGTTCTTCAGTGCGTTTGTGCAGCCTGC
TGCGGGACTTACTGAGGATTATGTGGGGACGCCGGTGGAGGCGGCGCTGA
AGTTGATTAAGTCGAAGGATGGGAATCAGGAGGGGGATCCGGAGAAGGCG
GCGCGGAGGATTCTGGAGGTTGTGATGGGGACGGGGATGGCTGCTGATAT
TACTGACAAGGGGTTTCTGAGGGTGGTGTTGGGGCCGGATTGTTGGAAGA
GGTTTTCGGGGAAGATTGACGGGGTGAGGGAGAATTTGGAGACCATGAGG
GGGATTGCGCATTCGACTAGTTTTGAGGAGTAGATGACCCAAAGACAACA
AACGTGGCTAATAACCGGCTCCTCCTCCGGCCTCGGCGCCTCCCTCGCCA
TCGCCGCCCTAAAAGCAGGCCACAAAGTCCTCGCCACAGCGCGCAACCCC
ACCACCGCATCAGCCCAAAACCCTCAAATCACCTCCCTGGGAGGAATCTG
GATCTCCCTCGACGTGAACGATCCCTCCACCCCCAGCAAGATCCAATCAG
CCATCAACGCGCACGCCGACGGCATCATCGACGTAGTCGTCAACAACGCA
GGTTACTCCCTCCTAGGAAGTATCGAGGACATGAGCGAATCGGAGATTGA
ATCCCAATTCAGTACGAATGTGTATGGGCCGATACGGGTATTGAAAGGTG
TGCTGCCCTTCATGAGAAAGAGGAGGGCAGGCACGGTCGTCAATATTAGT
AGTAGTGCCGGTGTGGATGGGGCGCCGGGGTGTGCGGTTTATGCGGGGTC
GAAGTTTGCGTTGGAAGAGTCTTTATCGAAAGAACTCCATCCCTTTGGGA
TCCGCGTCCTGCTTGTTGAACCGGGGTATTTTCGGACCAAGTTCTTCAGT
GCGTTTGTGCAGCCTGCTGCGGGACTTACTGAGGATTATGTGGGGACGCC
GGTGGAGGCGGCGCTGAAGTTGATTAAGTCGAAGGATGGGAATCAGGAGG
GGGATCCGGAGAAGGCGGCGCGGAGGATTCTGGAGGTTGTGATGGGGACG
GGGATGGCTGCTGATATTACTGACAAGGGGTTTCTGAGGGTGGTGTTGGG
GCCGGATTGTTGGAAGAGGTTTTCGGGGAAGATTGACGGGGTGAGGGAGA
ATTTGGAGACCATGAGGGGGATTGCGCATTCGACTAGTTTTGAGGAGTAG
ATGACCCAAAGACAACAAACGTGGCTAATAACCGGCTCCTCCTCCGGCCT
CGGCGCCTCCCTCGCCATCGCCGCCCTAAAAGCAGGCCACAAAGTCCTCG
CCACAGCGCGCAACCCCACCACCGCATCAGCCCAAAACCCTCAAATCACC
TCCCTGGGAGGAATCTGGATCTCCCTCGACGTGAACGATCCCTCCACCCC
CAGCAAGATCCAATCAGCCATCAACGCGCACGCCGACGGCATCATCGACG
TAGTCGTCAACAACGCAGGTTACTCCCTCCTAGGAAGTATCGAGGACATG
AGCGAATCGGAGATTGAATCCCAATTCAGTACGAATGTGTATGGGCCGAT
ACGGGTATTGAAAGGTGTGCTGCCCTTCATGAGAAAGAGGAGGGCAGGCA
CGGTCGTCAATATTAGTAGTAGTGCCGGTGTGGATGGGGCGCCGGGGTGT
GCGGTTTATGCGGGGTCGAAGTTTGCGTTGGAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51745CAN33_51745Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51745-T1CAN33_51745-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51745-T1.cdsCAN33_51745-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51745-T1.exon2CAN33_51745-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51745-T1.exon1CAN33_51745-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1009304..1010271 -
Powered by Drupal