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CAN33_51755-T1, CAN33_51755-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51755-T1
Unique NameCAN33_51755-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1013442..1014654+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51755-T1 ID=CAN33_51755-T1|Name=CAN33_51755-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1213bp|location=Sequence derived from alignment at NKJJ01000020.1:1013442..1014654+ (Aspergillus niger FDAARGOS_311)
ATGTCCTCTACTGAAACGCAATTTGGAAACATGTCGACTACTGTTCTTGT
CACTGGTGCTACCGGCCTTCTGGGTCGACAGGTATTCAATACCTTCAAGC
ACTCCGGCTGTCTGGTCGTGGGTCAAGGCTATTCCAGAGCCATACCTCCC
ACGATACAGAAGGCCGATCTGGAAAAGGAGGAGGACATCAAGAATTTGTT
GAACGAAGCGAAGTAAATCAATTCCCGACTACGGCTTCCGCCTGCATCTT
ACACTGAATACCCCCCATCTCACACCCGCGTTGTACACGAATTGAATCTG
ACTGATGTCCGTGCCCCTGCAGACCTCAGATAGTCATCCATTGTACGCCA
CCTCCTGTTGGAAATGCAGCCAATCTGCATCGCCTTGTACGCTGACCGTT
CCGCTCTAGGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCG
GACCAGGCGCGTCGGGTCAACGTTGACGCCACCCGCACCCTCGCAGAAGA
GACCGCGCGCCGTGGTGCCCTGCTGGTTTACATCTCAACCGACTATGTTT
TCCCTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGATGCTCAGACCAAC
CCGCCGAATCTGTACGGGCAGTTCAAGCGGGATGGCGAGGTGGCTGTGCT
GGAGGCCACCAAGGACACCGGGCTAGGGATTGTGCTGCGGGTGCCCGTGT
TGTATGGGACTGCTAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTG
GATGCGGTGTACAAGGCCCAAGATGAGAGTGCGGGCGTGAAGATGGACGA
CTGGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCC
GTGACATTGTAATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTT
CCCAAGATCCTGCAATTCTCGTCGGAGGATCGAATGACCAAGTACGAGAT
TTGTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTAC
GCAACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGAC
ACTCACCTGTCGACAAAAGCGCTGAAGGAGCTCGGAATTGATCTTCGGAC
GGTCGACTTTGTATCGTGGTGGTAAGTTGTTCTTTCCCTTATCAGGATGG
TGCATAGTAGAGAGGCTAACTCTCAGACGCAGGCGGAAACACTTGGGAGC
GTACAAGCATTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1013442..1014654+

>CAN33_51755-T1 ID=CAN33_51755-T1|Name=CAN33_51755-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3900bp|location=Sequence derived from alignment at NKJJ01000020.1:1013442..1014654+ (Aspergillus niger FDAARGOS_311)
ATGTCCTCTACTGAAACGCAATTTGGAAACATGTCGACTACTGTTCTTGT
CACTGGTGCTACCGGCCTTCTGGGTCGACAGGTATTCAATACCTTCAAGC
ACTCCGGCTGTCTGGTCGTGGGTCAAGGCTATTCCAGAGCCATACCTCCC
ACGATACAGAAGGCCGATCTGGAAAAGGAGGAGGACATCAAGAATTTGTT
GAACGAAGCGAAACCTCAGATAGTCATCCATTGTGCCGCAAACCGTTCCC
CCGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGAC
GCCACCCGCACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGT
TTACATCTCAACCGACTATGTTTTCCCTGGTAAGGAGGGGGAGGCTCCCT
ACGAGGCCGATGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAG
CGGGATGGCGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGG
GATTGTGCTGCGGGTGCCCGTGTTGTATGGGACTGCTAAGGAGAACTCGG
AGAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAAGATGAG
AGTGCGGGCGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACAC
CGAAGATGTTGCACGGGTGTGCCGTGACATTGTAATCAAGTATGTCAAGG
AGCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAATTCTCGTCGGAG
GATCGAATGACCAAGTACGAGATTTGTGAGAAGCTGGCGGATGTGCTCGG
ACTGTCCCTGGTTGGCATGGTACGCAACAAGCAAGGGAATGATCCAAACG
CGAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAG
GAGCTCGGAATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGGCGGAA
ACACTTGGGAGCGTACAAGCATTAAATGTCCTCTACTGAAACGCAATTTG
GAAACATGTCGACTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGT
CGACAGGTATTCAATACCTTCAAGCACTCCGGCTGTCTGGTCGTGGGTCA
AGGCTATTCCAGAGCCATACCTCCCACGATACAGAAGGCCGATCTGGAAA
AGGAGGAGGACATCAAGAATTTGTTGAACGAAGCGAAACCTCAGATAGTC
ATCCATTGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGA
CCAGGCGCGTCGGGTCAACGTTGACGCCACCCGCACCCTCGCAGAAGAGA
CCGCGCGCCGTGGTGCCCTGCTGGTTTACATCTCAACCGACTATGTTTTC
CCTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGATGCTCAGACCAACCC
GCCGAATCTGTACGGGCAGTTCAAGCGGGATGGCGAGGTGGCTGTGCTGG
AGGCCACCAAGGACACCGGGCTAGGGATTGTGCTGCGGGTGCCCGTGTTG
TATGGGACTGCTAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGA
TGCGGTGTACAAGGCCCAAGATGAGAGTGCGGGCGTGAAGATGGACGACT
GGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGT
GACATTGTAATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCC
CAAGATCCTGCAATTCTCGTCGGAGGATCGAATGACCAAGTACGAGATTT
GTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTACGC
AACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACAC
TCACCTGTCGACAAAAGCGCTGAAGGAGCTCGGAATTGATCTTCGGACGG
TCGACTTTGTATCGTGGTGGCGGAAACACTTGGGAGCGTACAAGCATTAA
ATGTCCTCTACTGAAACGCAATTTGGAAACATGTCGACTACTGTTCTTGT
CACTGGTGCTACCGGCCTTCTGGGTCGACAGGTATTCAATACCTTCAAGC
ACTCCGGCTGTCTGGTCGTGGGTCAAGGCTATTCCAGAGCCATACCTCCC
ACGATACAGAAGGCCGATCTGGAAAAGGAGGAGGACATCAAGAATTTGTT
GAACGAAGCGAAACCTCAGATAGTCATCCATTGTGCCGCAAACCGTTCCC
CCGACCTGTGCGACCAGAACCCGGACCAGGCGCGTCGGGTCAACGTTGAC
GCCACCCGCACCCTCGCAGAAGAGACCGCGCGCCGTGGTGCCCTGCTGGT
TTACATCTCAACCGACTATGTTTTCCCTGGTAAGGAGGGGGAGGCTCCCT
ACGAGGCCGATGCTCAGACCAACCCGCCGAATCTGTACGGGCAGTTCAAG
CGGGATGGCGAGGTGGCTGTGCTGGAGGCCACCAAGGACACCGGGCTAGG
GATTGTGCTGCGGGTGCCCGTGTTGTATGGGACTGCTAAGGAGAACTCGG
AGAGCGCCGTCAACACCCTAGTGGATGCGGTGTACAAGGCCCAAGATGAG
AGTGCGGGCGTGAAGATGGACGACTGGGCTCTGCGCTATCCCACCAACAC
CGAAGATGTTGCACGGGTGTGCCGTGACATTGTAATCAAGTATGTCAAGG
AGCGGCAGCGCATCCAGGAGCTTCCCAAGATCCTGCAATTCTCGTCGGAG
GATCGAATGACCAAGTACGAGATTTGTGAGAAGCTGGCGGATGTGCTCGG
ACTGTCCCTGGTTGGCATGGTACGCAACAAGCAAGGGAATGATCCAAACG
CGAGTGTGCAGCGGCCCTACGACACTCACCTGTCGACAAAAGCGCTGAAG
GAGCTCGGAATTGATCTTCGGACGGTCGACTTTGTATCGTGGTGGCGGAA
ACACTTGGGAGCGTACAAGCATTAAATGTCCTCTACTGAAACGCAATTTG
GAAACATGTCGACTACTGTTCTTGTCACTGGTGCTACCGGCCTTCTGGGT
CGACAGGTATTCAATACCTTCAAGCACTCCGGCTGTCTGGTCGTGGGTCA
AGGCTATTCCAGAGCCATACCTCCCACGATACAGAAGGCCGATCTGGAAA
AGGAGGAGGACATCAAGAATTTGTTGAACGAAGCGAAACCTCAGATAGTC
ATCCATTGTGCCGCAAACCGTTCCCCCGACCTGTGCGACCAGAACCCGGA
CCAGGCGCGTCGGGTCAACGTTGACGCCACCCGCACCCTCGCAGAAGAGA
CCGCGCGCCGTGGTGCCCTGCTGGTTTACATCTCAACCGACTATGTTTTC
CCTGGTAAGGAGGGGGAGGCTCCCTACGAGGCCGATGCTCAGACCAACCC
GCCGAATCTGTACGGGCAGTTCAAGCGGGATGGCGAGGTGGCTGTGCTGG
AGGCCACCAAGGACACCGGGCTAGGGATTGTGCTGCGGGTGCCCGTGTTG
TATGGGACTGCTAAGGAGAACTCGGAGAGCGCCGTCAACACCCTAGTGGA
TGCGGTGTACAAGGCCCAAGATGAGAGTGCGGGCGTGAAGATGGACGACT
GGGCTCTGCGCTATCCCACCAACACCGAAGATGTTGCACGGGTGTGCCGT
GACATTGTAATCAAGTATGTCAAGGAGCGGCAGCGCATCCAGGAGCTTCC
CAAGATCCTGCAATTCTCGTCGGAGGATCGAATGACCAAGTACGAGATTT
GTGAGAAGCTGGCGGATGTGCTCGGACTGTCCCTGGTTGGCATGGTACGC
AACAAGCAAGGGAATGATCCAAACGCGAGTGTGCAGCGGCCCTACGACAC
TCACCTGTCGACAAAAGCGCTGAAGGAGCTCGGAATTGATCTTCGGACGG
TCGACTTTGTATCGTGGTGGCGGAAACACTTGGGAGCGTACAAGCATTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51755CAN33_51755Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51755-T1.exon1CAN33_51755-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_51755-T1.exon2CAN33_51755-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51755-T1.exon3CAN33_51755-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_51755-T1.exon4CAN33_51755-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51755-T1.cdsCAN33_51755-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51755-T1CAN33_51755-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR029903
DBxrefPFAM:PF04321
DBxrefPFAM:PF01370
DBxrefPFAM:PF01073
ProductRmlD substrate binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1013442..1014654 +
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